Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFRSF1AP19438 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.24■□□□□ 0.83
TNFRSF1AP19438 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFRSF1AP19438 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.23■□□□□ 0.83
TNFRSF1AP19438 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TNFRSF1AP19438 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFRSF1AP19438 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNFRSF1AP19438 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFRSF1AP19438 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFRSF1AP19438 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFRSF1AP19438 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.23■□□□□ 0.83
TNFRSF1AP19438 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.23■□□□□ 0.83
TNFRSF1AP19438 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFRSF1AP19438 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.23■□□□□ 0.83
TNFRSF1AP19438 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.23■□□□□ 0.83
TNFRSF1AP19438 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFRSF1AP19438 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TNFRSF1AP19438 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TNFRSF1AP19438 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.22■□□□□ 0.83
TNFRSF1AP19438 ERN1-208ENST00000606895 2068 ntBASIC20.22■□□□□ 0.83
TNFRSF1AP19438 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TNFRSF1AP19438 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNFRSF1AP19438 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNFRSF1AP19438 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.21■□□□□ 0.83
TNFRSF1AP19438 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.21■□□□□ 0.83
TNFRSF1AP19438 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.21■□□□□ 0.83
TNFRSF1AP19438 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFRSF1AP19438 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFRSF1AP19438 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.2■□□□□ 0.82
TNFRSF1AP19438 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.2■□□□□ 0.82
TNFRSF1AP19438 AC019171.1-201ENST00000601251 1056 ntBASIC20.2■□□□□ 0.82
TNFRSF1AP19438 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TNFRSF1AP19438 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFRSF1AP19438 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFRSF1AP19438 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFRSF1AP19438 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNFRSF1AP19438 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNFRSF1AP19438 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TNFRSF1AP19438 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNFRSF1AP19438 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.19■□□□□ 0.82
TNFRSF1AP19438 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFRSF1AP19438 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFRSF1AP19438 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.18■□□□□ 0.82
TNFRSF1AP19438 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.18■□□□□ 0.82
TNFRSF1AP19438 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.18■□□□□ 0.82
TNFRSF1AP19438 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.18■□□□□ 0.82
TNFRSF1AP19438 AC145676.1-201ENST00000514988 2004 ntBASIC20.18■□□□□ 0.82
TNFRSF1AP19438 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFRSF1AP19438 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFRSF1AP19438 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFRSF1AP19438 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.18■□□□□ 0.82
TNFRSF1AP19438 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFRSF1AP19438 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNFRSF1AP19438 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNFRSF1AP19438 DUSP8P4-201ENST00000399538 1761 ntBASIC20.17■□□□□ 0.82
TNFRSF1AP19438 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.17■□□□□ 0.82
TNFRSF1AP19438 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.17■□□□□ 0.82
TNFRSF1AP19438 AC010980.1-201ENST00000587192 1142 ntBASIC20.17■□□□□ 0.82
TNFRSF1AP19438 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TNFRSF1AP19438 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.17■□□□□ 0.82
TNFRSF1AP19438 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TNFRSF1AP19438 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.16■□□□□ 0.82
TNFRSF1AP19438 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TNFRSF1AP19438 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TNFRSF1AP19438 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFRSF1AP19438 AC091060.1-201ENST00000623524 1766 ntBASIC20.16■□□□□ 0.82
TNFRSF1AP19438 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNFRSF1AP19438 LONRF2P2-201ENST00000439212 571 ntBASIC20.16■□□□□ 0.82
TNFRSF1AP19438 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFRSF1AP19438 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFRSF1AP19438 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFRSF1AP19438 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFRSF1AP19438 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.15■□□□□ 0.82
TNFRSF1AP19438 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.15■□□□□ 0.82
TNFRSF1AP19438 AC096887.2-201ENST00000623443 1957 ntBASIC20.15■□□□□ 0.82
TNFRSF1AP19438 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
TNFRSF1AP19438 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.15■□□□□ 0.82
TNFRSF1AP19438 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.15■□□□□ 0.82
TNFRSF1AP19438 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNFRSF1AP19438 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFRSF1AP19438 AC097639.1-201ENST00000565519 1891 ntBASIC20.15■□□□□ 0.82
TNFRSF1AP19438 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFRSF1AP19438 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFRSF1AP19438 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFRSF1AP19438 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFRSF1AP19438 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TNFRSF1AP19438 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFRSF1AP19438 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TNFRSF1AP19438 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFRSF1AP19438 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.14■□□□□ 0.81
TNFRSF1AP19438 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFRSF1AP19438 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.14■□□□□ 0.81
TNFRSF1AP19438 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFRSF1AP19438 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFRSF1AP19438 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TNFRSF1AP19438 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TNFRSF1AP19438 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFRSF1AP19438 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.13■□□□□ 0.81
TNFRSF1AP19438 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNFRSF1AP19438 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 565.4 ms