Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RAI1Q7Z5J4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.76■□□□□ 0.91
RAI1Q7Z5J4 THA1P-201ENST00000590384 1145 ntBASIC20.76■□□□□ 0.91
RAI1Q7Z5J4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAI1Q7Z5J4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAI1Q7Z5J4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.75■□□□□ 0.91
RAI1Q7Z5J4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAI1Q7Z5J4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RAI1Q7Z5J4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAI1Q7Z5J4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAI1Q7Z5J4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAI1Q7Z5J4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAI1Q7Z5J4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAI1Q7Z5J4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RAI1Q7Z5J4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAI1Q7Z5J4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
RAI1Q7Z5J4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RAI1Q7Z5J4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.74■□□□□ 0.91
RAI1Q7Z5J4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.74■□□□□ 0.91
RAI1Q7Z5J4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAI1Q7Z5J4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAI1Q7Z5J4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAI1Q7Z5J4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RAI1Q7Z5J4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.73■□□□□ 0.91
RAI1Q7Z5J4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
RAI1Q7Z5J4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAI1Q7Z5J4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAI1Q7Z5J4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAI1Q7Z5J4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.72■□□□□ 0.91
RAI1Q7Z5J4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAI1Q7Z5J4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAI1Q7Z5J4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAI1Q7Z5J4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAI1Q7Z5J4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAI1Q7Z5J4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RAI1Q7Z5J4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAI1Q7Z5J4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.71■□□□□ 0.91
RAI1Q7Z5J4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAI1Q7Z5J4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.71■□□□□ 0.91
RAI1Q7Z5J4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAI1Q7Z5J4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
RAI1Q7Z5J4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAI1Q7Z5J4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.7■□□□□ 0.9
RAI1Q7Z5J4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RAI1Q7Z5J4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAI1Q7Z5J4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.7■□□□□ 0.9
RAI1Q7Z5J4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.7■□□□□ 0.9
RAI1Q7Z5J4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.7■□□□□ 0.9
RAI1Q7Z5J4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAI1Q7Z5J4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.69■□□□□ 0.9
RAI1Q7Z5J4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAI1Q7Z5J4 AC022616.5-201ENST00000518796 181 ntBASIC20.69■□□□□ 0.9
RAI1Q7Z5J4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.69■□□□□ 0.9
RAI1Q7Z5J4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.69■□□□□ 0.9
RAI1Q7Z5J4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAI1Q7Z5J4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAI1Q7Z5J4 AL356441.2-201ENST00000443009 864 ntBASIC20.68■□□□□ 0.9
RAI1Q7Z5J4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.68■□□□□ 0.9
RAI1Q7Z5J4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RAI1Q7Z5J4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAI1Q7Z5J4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAI1Q7Z5J4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.68■□□□□ 0.9
RAI1Q7Z5J4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.68■□□□□ 0.9
RAI1Q7Z5J4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.68■□□□□ 0.9
RAI1Q7Z5J4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAI1Q7Z5J4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAI1Q7Z5J4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.67■□□□□ 0.9
RAI1Q7Z5J4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAI1Q7Z5J4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.67■□□□□ 0.9
RAI1Q7Z5J4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RAI1Q7Z5J4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAI1Q7Z5J4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAI1Q7Z5J4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RAI1Q7Z5J4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAI1Q7Z5J4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
RAI1Q7Z5J4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RAI1Q7Z5J4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
RAI1Q7Z5J4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.66■□□□□ 0.9
RAI1Q7Z5J4 AL121749.1-202ENST00000609313 2153 ntBASIC20.66■□□□□ 0.9
RAI1Q7Z5J4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
RAI1Q7Z5J4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.65■□□□□ 0.9
RAI1Q7Z5J4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.65■□□□□ 0.9
RAI1Q7Z5J4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAI1Q7Z5J4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAI1Q7Z5J4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAI1Q7Z5J4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAI1Q7Z5J4 AC239859.2-201ENST00000444165 318 ntBASIC20.65■□□□□ 0.9
RAI1Q7Z5J4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.65■□□□□ 0.9
RAI1Q7Z5J4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAI1Q7Z5J4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAI1Q7Z5J4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAI1Q7Z5J4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAI1Q7Z5J4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAI1Q7Z5J4 LONRF2P2-201ENST00000439212 571 ntBASIC20.64■□□□□ 0.89
RAI1Q7Z5J4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.64■□□□□ 0.89
RAI1Q7Z5J4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RAI1Q7Z5J4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RAI1Q7Z5J4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAI1Q7Z5J4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.63■□□□□ 0.89
RAI1Q7Z5J4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms