Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 tR(ACG)KtR(ACG)K 73 nt7.02□□□□□ -1.29
RPT4P53549 tR(ACG)LtR(ACG)L 73 nt7.02□□□□□ -1.29
RPT4P53549 tR(ACG)OtR(ACG)O 73 nt7.02□□□□□ -1.29
RPT4P53549 EFM4YIL064W 774 nt7.02□□□□□ -1.29
RPT4P53549 YMR119W-AYMR119W-A 375 nt7.02□□□□□ -1.29
RPT4P53549 RPL21AYBR191W 483 nt7.02□□□□□ -1.29
RPT4P53549 SRF1YDL133W 1314 nt7.01□□□□□ -1.29
RPT4P53549 MDH3YDL078C 1032 nt7.01□□□□□ -1.29
RPT4P53549 GTT3YEL017W 1014 nt7.01□□□□□ -1.29
RPT4P53549 QCR6YFR033C 444 nt7.01□□□□□ -1.29
RPT4P53549 YGR022CYGR022C 330 nt7.01□□□□□ -1.29
RPT4P53549 YIR042CYIR042C 711 nt7.01□□□□□ -1.29
RPT4P53549 CCP1YKR066C 1086 nt7.01□□□□□ -1.29
RPT4P53549 YNR075C-AYNR075C-A 93 nt7.01□□□□□ -1.29
RPT4P53549 AFG2YLR397C 2343 nt7.01□□□□□ -1.29
RPT4P53549 YIL108WYIL108W 2091 nt7□□□□□ -1.29
RPT4P53549 GUD1YDL238C 1470 nt7□□□□□ -1.29
RPT4P53549 CMK2YOL016C 1344 nt7□□□□□ -1.29
RPT4P53549 SMC5YOL034W 3282 nt6.99□□□□□ -1.29
RPT4P53549 UBP13YBL067C 2244 nt6.99□□□□□ -1.29
RPT4P53549 PGM1YKL127W 1713 nt6.98□□□□□ -1.29
RPT4P53549 ATG4YNL223W 1485 nt6.98□□□□□ -1.29
RPT4P53549 TRR1YDR353W 960 nt6.98□□□□□ -1.29
RPT4P53549 SES1YDR023W 1389 nt6.97□□□□□ -1.29
RPT4P53549 DCN1YLR128W 810 nt6.97□□□□□ -1.29
RPT4P53549 YML133CYML133C 4125 nt6.97□□□□□ -1.29
RPT4P53549 YHM2YMR241W 945 nt6.97□□□□□ -1.29
RPT4P53549 ARG1YOL058W 1263 nt6.97□□□□□ -1.29
RPT4P53549 YKR023WYKR023W 1593 nt6.96□□□□□ -1.29
RPT4P53549 LST8YNL006W 912 nt6.96□□□□□ -1.3
RPT4P53549 YBR144CYBR144C 315 nt6.96□□□□□ -1.3
RPT4P53549 IME2YJL106W 1938 nt6.95□□□□□ -1.3
RPT4P53549 MSB3YNL293W 1902 nt6.95□□□□□ -1.3
RPT4P53549 YCR047W-AYCR047W-A 207 nt6.95□□□□□ -1.3
RPT4P53549 BCY1YIL033C 1251 nt6.95□□□□□ -1.3
RPT4P53549 COA1YIL157C 594 nt6.95□□□□□ -1.3
RPT4P53549 GAT4YIR013C 366 nt6.95□□□□□ -1.3
RPT4P53549 DAL3YIR032C 588 nt6.95□□□□□ -1.3
RPT4P53549 BSC4YNL269W 396 nt6.95□□□□□ -1.3
RPT4P53549 HEL1YKR017C 1656 nt6.95□□□□□ -1.3
RPT4P53549 YGL235WYGL235W 537 nt6.94□□□□□ -1.3
RPT4P53549 YGR068W-AYGR068W-A 96 nt6.94□□□□□ -1.3
RPT4P53549 SYN8YAL014C 768 nt6.94□□□□□ -1.3
RPT4P53549 YKL031WYKL031W 414 nt6.94□□□□□ -1.3
RPT4P53549 CNE1YAL058W 1509 nt6.93□□□□□ -1.3
RPT4P53549 RRP4YHR069C 1080 nt6.93□□□□□ -1.3
RPT4P53549 DMA1YHR115C 1251 nt6.93□□□□□ -1.3
RPT4P53549 RPS9AYPL081W 594 nt6.93□□□□□ -1.3
RPT4P53549 ARR3YPR201W 1215 nt6.93□□□□□ -1.3
RPT4P53549 GPB2YAL056W 2643 nt6.93□□□□□ -1.3
RPT4P53549 KKQ8YKL168C 2175 nt6.92□□□□□ -1.3
RPT4P53549 YCR061WYCR061W 1896 nt6.92□□□□□ -1.3
RPT4P53549 CRP1YHR146W 1398 nt6.91□□□□□ -1.3
RPT4P53549 YDR278CYDR278C 318 nt6.9□□□□□ -1.3
RPT4P53549 HSP12YFL014W 330 nt6.9□□□□□ -1.3
RPT4P53549 PAN6YIL145C 930 nt6.9□□□□□ -1.3
RPT4P53549 YLR194CYLR194C 765 nt6.9□□□□□ -1.3
RPT4P53549 HXT13YEL069C 1695 nt6.9□□□□□ -1.31
RPT4P53549 ARP2YDL029W 1176 nt6.89□□□□□ -1.31
RPT4P53549 DPH5YLR172C 903 nt6.89□□□□□ -1.31
RPT4P53549 SEC13YLR208W 894 nt6.89□□□□□ -1.31
RPT4P53549 APE3YBR286W 1614 nt6.88□□□□□ -1.31
RPT4P53549 YDL114WYDL114W 927 nt6.87□□□□□ -1.31
RPT4P53549 VPS61YDR136C 573 nt6.87□□□□□ -1.31
RPT4P53549 LDB18YLL049W 540 nt6.87□□□□□ -1.31
RPT4P53549 GLN1YPR035W 1113 nt6.87□□□□□ -1.31
RPT4P53549 MRPL36YBR122C 534 nt6.87□□□□□ -1.31
RPT4P53549 KTR3YBR205W 1215 nt6.87□□□□□ -1.31
RPT4P53549 GYP8YFL027C 1494 nt6.86□□□□□ -1.31
RPT4P53549 YFL064CYFL064C 525 nt6.86□□□□□ -1.31
RPT4P53549 SUP19tS(UGA)E 82 nt6.86□□□□□ -1.31
RPT4P53549 SUP17tS(UGA)I 82 nt6.86□□□□□ -1.31
RPT4P53549 SUP16tS(UGA)P 82 nt6.86□□□□□ -1.31
RPT4P53549 YPR202WYPR202W 717 nt6.86□□□□□ -1.31
RPT4P53549 ARG81YML099C 2643 nt6.86□□□□□ -1.31
RPT4P53549 YDR109CYDR109C 2148 nt6.86□□□□□ -1.31
RPT4P53549 ATG22YCL038C 1587 nt6.86□□□□□ -1.31
RPT4P53549 YNL040WYNL040W 1371 nt6.85□□□□□ -1.31
RPT4P53549 MCM3YEL032W 2916 nt6.85□□□□□ -1.31
RPT4P53549 YCL065WYCL065W 369 nt6.85□□□□□ -1.31
RPT4P53549 YDR154CYDR154C 351 nt6.85□□□□□ -1.31
RPT4P53549 YRA1YDR381W 681 nt6.85□□□□□ -1.31
RPT4P53549 MLC1YGL106W 450 nt6.85□□□□□ -1.31
RPT4P53549 VMA16YHR026W 642 nt6.85□□□□□ -1.31
RPT4P53549 SGV1YPR161C 1974 nt6.85□□□□□ -1.31
RPT4P53549 TEA1YOR337W 2280 nt6.84□□□□□ -1.31
RPT4P53549 CAR1YPL111W 1002 nt6.84□□□□□ -1.31
RPT4P53549 RQC1YDR333C 2172 nt6.84□□□□□ -1.32
RPT4P53549 CIR2YOR356W 1896 nt6.83□□□□□ -1.32
RPT4P53549 GIT1YCR098C 1557 nt6.83□□□□□ -1.32
RPT4P53549 FRS2YFL022C 1512 nt6.83□□□□□ -1.32
RPT4P53549 KNH1YDL049C 807 nt6.83□□□□□ -1.32
RPT4P53549 RPT3YDR394W 1287 nt6.83□□□□□ -1.32
RPT4P53549 BIM1YER016W 1035 nt6.83□□□□□ -1.32
RPT4P53549 PNP1YLR209C 936 nt6.83□□□□□ -1.32
RPT4P53549 SHM1YBR263W 1473 nt6.83□□□□□ -1.32
RPT4P53549 ORC5YNL261W 1440 nt6.83□□□□□ -1.32
RPT4P53549 PPS1YBR276C 2424 nt6.82□□□□□ -1.32
RPT4P53549 TEP1YNL128W 1305 nt6.82□□□□□ -1.32
RPT4P53549 QNS1YHR074W 2145 nt6.82□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms