Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
KRT78Q8N1N4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
KRT78Q8N1N4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KRT78Q8N1N4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
KRT78Q8N1N4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KRT78Q8N1N4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KRT78Q8N1N4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 RP9P-202ENST00000450133 1212 ntBASIC23.28■■□□□ 1.32
KRT78Q8N1N4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 RNF126P1-201ENST00000567452 1320 ntBASIC23.28■■□□□ 1.32
KRT78Q8N1N4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KRT78Q8N1N4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
KRT78Q8N1N4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
KRT78Q8N1N4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.26■■□□□ 1.31
KRT78Q8N1N4 AC007029.1-201ENST00000604183 313 ntBASIC23.26■■□□□ 1.31
KRT78Q8N1N4 AC010501.1-201ENST00000606270 1962 ntBASIC23.26■■□□□ 1.31
KRT78Q8N1N4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.25■■□□□ 1.31
KRT78Q8N1N4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.24■■□□□ 1.31
KRT78Q8N1N4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
KRT78Q8N1N4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KRT78Q8N1N4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
KRT78Q8N1N4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
KRT78Q8N1N4 ERN1-208ENST00000606895 2068 ntBASIC23.24■■□□□ 1.31
KRT78Q8N1N4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
KRT78Q8N1N4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KRT78Q8N1N4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KRT78Q8N1N4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
KRT78Q8N1N4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KRT78Q8N1N4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.23■■□□□ 1.31
KRT78Q8N1N4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
KRT78Q8N1N4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.23■■□□□ 1.31
KRT78Q8N1N4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KRT78Q8N1N4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KRT78Q8N1N4 AC093536.1-201ENST00000569153 554 ntBASIC23.22■■□□□ 1.31
KRT78Q8N1N4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KRT78Q8N1N4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KRT78Q8N1N4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.22■■□□□ 1.31
KRT78Q8N1N4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KRT78Q8N1N4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KRT78Q8N1N4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.22■■□□□ 1.31
KRT78Q8N1N4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
KRT78Q8N1N4 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.21■■□□□ 1.31
KRT78Q8N1N4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
KRT78Q8N1N4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
KRT78Q8N1N4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
KRT78Q8N1N4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
KRT78Q8N1N4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
KRT78Q8N1N4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.2■■□□□ 1.3
KRT78Q8N1N4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
KRT78Q8N1N4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
KRT78Q8N1N4 HSD17B1P1-201ENST00000590052 955 ntBASIC23.2■■□□□ 1.3
KRT78Q8N1N4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.19■■□□□ 1.3
KRT78Q8N1N4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KRT78Q8N1N4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
KRT78Q8N1N4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
KRT78Q8N1N4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
KRT78Q8N1N4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
KRT78Q8N1N4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
KRT78Q8N1N4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
KRT78Q8N1N4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.18■■□□□ 1.3
KRT78Q8N1N4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
KRT78Q8N1N4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
KRT78Q8N1N4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.17■■□□□ 1.3
KRT78Q8N1N4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KRT78Q8N1N4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
KRT78Q8N1N4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KRT78Q8N1N4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KRT78Q8N1N4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
KRT78Q8N1N4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
KRT78Q8N1N4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
KRT78Q8N1N4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms