Protein–RNA interactions for Protein: P52917

VPS4, Vacuolar protein sorting-associated protein 4, yeastyeast

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS4P52917 KSH1YNL024C-A 219 nt7.39□□□□□ -1.23
VPS4P52917 YPL257WYPL257W 582 nt7.39□□□□□ -1.23
VPS4P52917 YDL177CYDL177C 513 nt7.38□□□□□ -1.23
VPS4P52917 PRS2YER099C 957 nt7.38□□□□□ -1.23
VPS4P52917 YJR084WYJR084W 1272 nt7.37□□□□□ -1.23
VPS4P52917 ASK1YKL052C 879 nt7.37□□□□□ -1.23
VPS4P52917 GCV3YAL044C 513 nt7.37□□□□□ -1.23
VPS4P52917 YLR112WYLR112W 420 nt7.37□□□□□ -1.23
VPS4P52917 RFC4YOL094C 972 nt7.37□□□□□ -1.23
VPS4P52917 IDP3YNL009W 1263 nt7.36□□□□□ -1.23
VPS4P52917 FET4YMR319C 1659 nt7.35□□□□□ -1.23
VPS4P52917 TUF1YOR187W 1314 nt7.35□□□□□ -1.23
VPS4P52917 NUP84YDL116W 2181 nt7.35□□□□□ -1.23
VPS4P52917 HSP12YFL014W 330 nt7.35□□□□□ -1.23
VPS4P52917 RUF23RUF23 254 nt7.35□□□□□ -1.23
VPS4P52917 RIO1YOR119C 1455 nt7.35□□□□□ -1.23
VPS4P52917 HXT15YDL245C 1704 nt7.35□□□□□ -1.23
VPS4P52917 HXT16YJR158W 1704 nt7.35□□□□□ -1.23
VPS4P52917 ISC1YER019W 1434 nt7.35□□□□□ -1.23
VPS4P52917 STT3YGL022W 2157 nt7.35□□□□□ -1.23
VPS4P52917 MKK1YOR231W 1527 nt7.34□□□□□ -1.23
VPS4P52917 MAK31YCR020C-A 267 nt7.34□□□□□ -1.23
VPS4P52917 YBR241CYBR241C 1467 nt7.34□□□□□ -1.23
VPS4P52917 CEM1YER061C 1329 nt7.33□□□□□ -1.24
VPS4P52917 RPS5YJR123W 678 nt7.33□□□□□ -1.24
VPS4P52917 OPI11YPR044C 354 nt7.33□□□□□ -1.24
VPS4P52917 YPR160C-AYPR160C-A 285 nt7.33□□□□□ -1.24
VPS4P52917 YIL077CYIL077C 963 nt7.32□□□□□ -1.24
VPS4P52917 SPO7YAL009W 780 nt7.32□□□□□ -1.24
VPS4P52917 YJR146WYJR146W 354 nt7.32□□□□□ -1.24
VPS4P52917 HDA1YNL021W 2121 nt7.32□□□□□ -1.24
VPS4P52917 CDC19YAL038W 1503 nt7.32□□□□□ -1.24
VPS4P52917 DFM1YDR411C 1026 nt7.31□□□□□ -1.24
VPS4P52917 PAC2YER007W 1557 nt7.31□□□□□ -1.24
VPS4P52917 HGH1YGR187C 1185 nt7.31□□□□□ -1.24
VPS4P52917 KTR5YNL029C 1569 nt7.31□□□□□ -1.24
VPS4P52917 YBL070CYBL070C 321 nt7.31□□□□□ -1.24
VPS4P52917 ARP3YJR065C 1350 nt7.31□□□□□ -1.24
VPS4P52917 GSH1YJL101C 2037 nt7.3□□□□□ -1.24
VPS4P52917 RSC30YHR056C 2652 nt7.3□□□□□ -1.24
VPS4P52917 YUR1YJL139C 1287 nt7.3□□□□□ -1.24
VPS4P52917 SSP120YLR250W 705 nt7.3□□□□□ -1.24
VPS4P52917 JNM1YMR294W 1122 nt7.3□□□□□ -1.24
VPS4P52917 DFR1YOR236W 636 nt7.3□□□□□ -1.24
VPS4P52917 KEL1YHR158C 3495 nt7.3□□□□□ -1.24
VPS4P52917 CSC1YLR241W 2349 nt7.29□□□□□ -1.24
VPS4P52917 YET3YDL072C 612 nt7.29□□□□□ -1.24
VPS4P52917 RPE1YJL121C 717 nt7.29□□□□□ -1.24
VPS4P52917 CCP1YKR066C 1086 nt7.29□□□□□ -1.24
VPS4P52917 SNT309YPR101W 528 nt7.29□□□□□ -1.24
VPS4P52917 YKR023WYKR023W 1593 nt7.29□□□□□ -1.24
VPS4P52917 ICL1YER065C 1674 nt7.28□□□□□ -1.24
VPS4P52917 KDX1YKL161C 1302 nt7.28□□□□□ -1.24
VPS4P52917 HAL5YJL165C 2568 nt7.28□□□□□ -1.24
VPS4P52917 RSA4YCR072C 1548 nt7.28□□□□□ -1.24
VPS4P52917 MRPL28YDR462W 444 nt7.28□□□□□ -1.24
VPS4P52917 ATG36YJL185C 882 nt7.28□□□□□ -1.24
VPS4P52917 PUS5YLR165C 765 nt7.28□□□□□ -1.24
VPS4P52917 POX1YGL205W 2247 nt7.28□□□□□ -1.24
VPS4P52917 GPH1YPR160W 2709 nt7.28□□□□□ -1.24
VPS4P52917 PPT1YGR123C 1542 nt7.27□□□□□ -1.25
VPS4P52917 RHB1YCR027C 630 nt7.27□□□□□ -1.25
VPS4P52917 RPP1YHR062C 882 nt7.27□□□□□ -1.25
VPS4P52917 MDE1YJR024C 735 nt7.27□□□□□ -1.25
VPS4P52917 IRC11YOR013W 471 nt7.27□□□□□ -1.25
VPS4P52917 MIP1YOR330C 3765 nt7.26□□□□□ -1.25
VPS4P52917 OGG1YML060W 1131 nt7.26□□□□□ -1.25
VPS4P52917 ARC35YNR035C 1029 nt7.26□□□□□ -1.25
VPS4P52917 ECM31YBR176W 939 nt7.26□□□□□ -1.25
VPS4P52917 RGD1YBR260C 2001 nt7.26□□□□□ -1.25
VPS4P52917 GEF1YJR040W 2340 nt7.26□□□□□ -1.25
VPS4P52917 YEL020CYEL020C 1683 nt7.25□□□□□ -1.25
VPS4P52917 ISN1YOR155C 1353 nt7.25□□□□□ -1.25
VPS4P52917 YEL009C-AYEL009C-A 408 nt7.25□□□□□ -1.25
VPS4P52917 GAT4YIR013C 366 nt7.25□□□□□ -1.25
VPS4P52917 RMA1YKL132C 1293 nt7.25□□□□□ -1.25
VPS4P52917 CAF40YNL288W 1122 nt7.25□□□□□ -1.25
VPS4P52917 UGX2YDL169C 672 nt7.24□□□□□ -1.25
VPS4P52917 UBP13YBL067C 2244 nt7.24□□□□□ -1.25
VPS4P52917 RPR2YIR015W 435 nt7.23□□□□□ -1.25
VPS4P52917 ADE12YNL220W 1302 nt7.23□□□□□ -1.25
VPS4P52917 tG(GCC)BtG(GCC)B 71 nt7.22□□□□□ -1.25
VPS4P52917 SUF16tG(GCC)C 71 nt7.22□□□□□ -1.25
VPS4P52917 tG(GCC)D1tG(GCC)D1 71 nt7.22□□□□□ -1.25
VPS4P52917 tG(GCC)D2tG(GCC)D2 71 nt7.22□□□□□ -1.25
VPS4P52917 tG(GCC)EtG(GCC)E 71 nt7.22□□□□□ -1.25
VPS4P52917 SUF20tG(GCC)F1 71 nt7.22□□□□□ -1.25
VPS4P52917 tG(GCC)F2tG(GCC)F2 71 nt7.22□□□□□ -1.25
VPS4P52917 tG(GCC)G1tG(GCC)G1 71 nt7.22□□□□□ -1.25
VPS4P52917 tG(GCC)G2tG(GCC)G2 71 nt7.22□□□□□ -1.25
VPS4P52917 tG(GCC)J1tG(GCC)J1 71 nt7.22□□□□□ -1.25
VPS4P52917 SUF23tG(GCC)J2 71 nt7.22□□□□□ -1.25
VPS4P52917 tG(GCC)MtG(GCC)M 71 nt7.22□□□□□ -1.25
VPS4P52917 tG(GCC)O1tG(GCC)O1 71 nt7.22□□□□□ -1.25
VPS4P52917 SUF17tG(GCC)O2 71 nt7.22□□□□□ -1.25
VPS4P52917 tG(GCC)P1tG(GCC)P1 71 nt7.22□□□□□ -1.25
VPS4P52917 tG(GCC)P2tG(GCC)P2 71 nt7.22□□□□□ -1.25
VPS4P52917 FHN1YGR131W 525 nt7.22□□□□□ -1.25
VPS4P52917 MTR3YGR158C 753 nt7.22□□□□□ -1.25
VPS4P52917 ECM14YHR132C 1293 nt7.22□□□□□ -1.25
Retrieved 100 of 7,029 protein–RNA pairs in 31.3 ms