Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 EEB1YPL095C 1371 nt5.79□□□□□ -1.48
SSN8P47821 ALD6YPL061W 1503 nt5.79□□□□□ -1.48
SSN8P47821 SUF5tG(CCC)O 72 nt5.78□□□□□ -1.48
SSN8P47821 CBR1YIL043C 855 nt5.78□□□□□ -1.48
SSN8P47821 PRI1YIR008C 1230 nt5.78□□□□□ -1.48
SSN8P47821 YLL056CYLL056C 897 nt5.78□□□□□ -1.48
SSN8P47821 ODC2YOR222W 924 nt5.78□□□□□ -1.48
SSN8P47821 SES1YDR023W 1389 nt5.78□□□□□ -1.48
SSN8P47821 YFL042CYFL042C 2025 nt5.77□□□□□ -1.49
SSN8P47821 GPI11YDR302W 660 nt5.77□□□□□ -1.49
SSN8P47821 MRPL19YNL185C 477 nt5.77□□□□□ -1.49
SSN8P47821 ELP3YPL086C 1674 nt5.77□□□□□ -1.49
SSN8P47821 ICP55YER078C 1536 nt5.77□□□□□ -1.49
SSN8P47821 YFL052WYFL052W 1398 nt5.77□□□□□ -1.49
SSN8P47821 UBA1YKL210W 3075 nt5.76□□□□□ -1.49
SSN8P47821 YJL211CYJL211C 444 nt5.76□□□□□ -1.49
SSN8P47821 YJR107WYJR107W 987 nt5.76□□□□□ -1.49
SSN8P47821 ZIM17YNL310C 525 nt5.76□□□□□ -1.49
SSN8P47821 YPR076WYPR076W 375 nt5.76□□□□□ -1.49
SSN8P47821 ADH5YBR145W 1056 nt5.76□□□□□ -1.49
SSN8P47821 AAP1YHR047C 2571 nt5.76□□□□□ -1.49
SSN8P47821 PFK2YMR205C 2880 nt5.76□□□□□ -1.49
SSN8P47821 CMR1YDL156W 1569 nt5.76□□□□□ -1.49
SSN8P47821 YAP1801YHR161C 1914 nt5.76□□□□□ -1.49
SSN8P47821 NPL6YMR091C 1308 nt5.75□□□□□ -1.49
SSN8P47821 YFR052C-AYFR052C-A 306 nt5.75□□□□□ -1.49
SSN8P47821 YLR122CYLR122C 378 nt5.75□□□□□ -1.49
SSN8P47821 TMA46YOR091W 1038 nt5.75□□□□□ -1.49
SSN8P47821 SFB3YHR098C 2790 nt5.75□□□□□ -1.49
SSN8P47821 NUP49YGL172W 1419 nt5.74□□□□□ -1.49
SSN8P47821 VPS5YOR069W 2028 nt5.74□□□□□ -1.49
SSN8P47821 JIP4YDR475C 2631 nt5.74□□□□□ -1.49
SSN8P47821 CWC21YDR482C 408 nt5.74□□□□□ -1.49
SSN8P47821 YLR296WYLR296W 327 nt5.74□□□□□ -1.49
SSN8P47821 YOL046CYOL046C 675 nt5.74□□□□□ -1.49
SSN8P47821 MSC3YLR219W 2187 nt5.74□□□□□ -1.49
SSN8P47821 PMT3YOR321W 2262 nt5.73□□□□□ -1.49
SSN8P47821 YHR020WYHR020W 2067 nt5.73□□□□□ -1.49
SSN8P47821 TOS6YNL300W 309 nt5.73□□□□□ -1.49
SSN8P47821 IRC11YOR013W 471 nt5.73□□□□□ -1.49
SSN8P47821 LGE1YPL055C 999 nt5.73□□□□□ -1.49
SSN8P47821 SUE1YPR151C 621 nt5.73□□□□□ -1.49
SSN8P47821 TFC6YDR362C 2019 nt5.73□□□□□ -1.49
SSN8P47821 GAA1YLR088W 1845 nt5.73□□□□□ -1.49
SSN8P47821 HED1YDR014W-A 489 nt5.72□□□□□ -1.49
SSN8P47821 AGX1YFL030W 1158 nt5.72□□□□□ -1.49
SSN8P47821 YKL018C-AYKL018C-A 300 nt5.72□□□□□ -1.49
SSN8P47821 SWD1YAR003W 1281 nt5.72□□□□□ -1.49
SSN8P47821 YNL092WYNL092W 1203 nt5.72□□□□□ -1.49
SSN8P47821 MCP1YOR228C 909 nt5.72□□□□□ -1.49
SSN8P47821 SEC62YPL094C 825 nt5.72□□□□□ -1.49
SSN8P47821 COX15YER141W 1461 nt5.71□□□□□ -1.49
SSN8P47821 PPH21YDL134C 1110 nt5.71□□□□□ -1.5
SSN8P47821 TAX4YJL083W 1815 nt5.71□□□□□ -1.5
SSN8P47821 TAH18YPR048W 1872 nt5.71□□□□□ -1.5
SSN8P47821 TNA1YGR260W 1605 nt5.7□□□□□ -1.5
SSN8P47821 YDR415CYDR415C 1125 nt5.7□□□□□ -1.5
SSN8P47821 tG(GCC)BtG(GCC)B 71 nt5.7□□□□□ -1.5
SSN8P47821 SUF16tG(GCC)C 71 nt5.7□□□□□ -1.5
SSN8P47821 tG(GCC)D1tG(GCC)D1 71 nt5.7□□□□□ -1.5
SSN8P47821 tG(GCC)D2tG(GCC)D2 71 nt5.7□□□□□ -1.5
SSN8P47821 tG(GCC)EtG(GCC)E 71 nt5.7□□□□□ -1.5
SSN8P47821 SUF20tG(GCC)F1 71 nt5.7□□□□□ -1.5
SSN8P47821 tG(GCC)F2tG(GCC)F2 71 nt5.7□□□□□ -1.5
SSN8P47821 tG(GCC)G1tG(GCC)G1 71 nt5.7□□□□□ -1.5
SSN8P47821 tG(GCC)G2tG(GCC)G2 71 nt5.7□□□□□ -1.5
SSN8P47821 tG(GCC)J1tG(GCC)J1 71 nt5.7□□□□□ -1.5
SSN8P47821 SUF23tG(GCC)J2 71 nt5.7□□□□□ -1.5
SSN8P47821 tG(GCC)MtG(GCC)M 71 nt5.7□□□□□ -1.5
SSN8P47821 tG(GCC)O1tG(GCC)O1 71 nt5.7□□□□□ -1.5
SSN8P47821 SUF17tG(GCC)O2 71 nt5.7□□□□□ -1.5
SSN8P47821 tG(GCC)P1tG(GCC)P1 71 nt5.7□□□□□ -1.5
SSN8P47821 tG(GCC)P2tG(GCC)P2 71 nt5.7□□□□□ -1.5
SSN8P47821 TIF2YJL138C 1188 nt5.7□□□□□ -1.5
SSN8P47821 ATG36YJL185C 882 nt5.7□□□□□ -1.5
SSN8P47821 TIF1YKR059W 1188 nt5.7□□□□□ -1.5
SSN8P47821 ICT1YLR099C 1185 nt5.7□□□□□ -1.5
SSN8P47821 AAD14YNL331C 1131 nt5.7□□□□□ -1.5
SSN8P47821 ASR1YPR093C 867 nt5.7□□□□□ -1.5
SSN8P47821 FMP40YPL222W 2067 nt5.7□□□□□ -1.5
SSN8P47821 PYC2YBR218C 3543 nt5.69□□□□□ -1.5
SSN8P47821 TOM20YGR082W 552 nt5.69□□□□□ -1.5
SSN8P47821 PHO86YJL117W 936 nt5.69□□□□□ -1.5
SSN8P47821 HST2YPL015C 1074 nt5.69□□□□□ -1.5
SSN8P47821 SPE3YPR069C 882 nt5.69□□□□□ -1.5
SSN8P47821 PZF1YPR186C 1290 nt5.69□□□□□ -1.5
SSN8P47821 NTE1YML059C 5040 nt5.69□□□□□ -1.5
SSN8P47821 SSK1YLR006C 2139 nt5.69□□□□□ -1.5
SSN8P47821 COQ1YBR003W 1422 nt5.68□□□□□ -1.5
SSN8P47821 URA1YKL216W 945 nt5.68□□□□□ -1.5
SSN8P47821 COS10YNR075W 1125 nt5.68□□□□□ -1.5
SSN8P47821 YBR113WYBR113W 483 nt5.68□□□□□ -1.5
SSN8P47821 STT3YGL022W 2157 nt5.67□□□□□ -1.5
SSN8P47821 CDC11YJR076C 1248 nt5.67□□□□□ -1.5
SSN8P47821 ARA2YMR041C 1008 nt5.67□□□□□ -1.5
SSN8P47821 OST3YOR085W 1053 nt5.67□□□□□ -1.5
SSN8P47821 DOT1YDR440W 1749 nt5.67□□□□□ -1.5
SSN8P47821 UTP4YDR324C 2331 nt5.66□□□□□ -1.5
SSN8P47821 MDH3YDL078C 1032 nt5.66□□□□□ -1.5
SSN8P47821 ORM1YGR038W 669 nt5.66□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 71.7 ms