Protein–RNA interactions for Protein: P34223

SHP1, UBX domain-containing protein 1, yeastyeast

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHP1P34223 HHY1YEL059W 309 nt6.83□□□□□ -1.32
SHP1P34223 SPO7YAL009W 780 nt6.83□□□□□ -1.32
SHP1P34223 ASK1YKL052C 879 nt6.83□□□□□ -1.32
SHP1P34223 ILV1YER086W 1731 nt6.83□□□□□ -1.32
SHP1P34223 ADE12YNL220W 1302 nt6.82□□□□□ -1.32
SHP1P34223 POB3YML069W 1659 nt6.82□□□□□ -1.32
SHP1P34223 CSM2YIL132C 642 nt6.82□□□□□ -1.32
SHP1P34223 AIM24YJR080C 1185 nt6.82□□□□□ -1.32
SHP1P34223 NTG1YAL015C 1200 nt6.81□□□□□ -1.32
SHP1P34223 YJR107WYJR107W 987 nt6.81□□□□□ -1.32
SHP1P34223 UTP4YDR324C 2331 nt6.8□□□□□ -1.32
SHP1P34223 FAF1YIL019W 1041 nt6.8□□□□□ -1.32
SHP1P34223 RPL5YPL131W 894 nt6.8□□□□□ -1.32
SHP1P34223 CDC13YDL220C 2775 nt6.79□□□□□ -1.32
SHP1P34223 UGX2YDL169C 672 nt6.79□□□□□ -1.32
SHP1P34223 CDC34YDR054C 888 nt6.79□□□□□ -1.32
SHP1P34223 LCB3YJL134W 1230 nt6.79□□□□□ -1.32
SHP1P34223 YKR032WYKR032W 315 nt6.79□□□□□ -1.32
SHP1P34223 YTH1YPR107C 627 nt6.79□□□□□ -1.32
SHP1P34223 ISN1YOR155C 1353 nt6.79□□□□□ -1.32
SHP1P34223 PMT3YOR321W 2262 nt6.78□□□□□ -1.32
SHP1P34223 CCC2YDR270W 3015 nt6.78□□□□□ -1.32
SHP1P34223 YCR061WYCR061W 1896 nt6.77□□□□□ -1.33
SHP1P34223 MDM31YHR194W 1740 nt6.77□□□□□ -1.33
SHP1P34223 YDL022C-AYDL022C-A 249 nt6.77□□□□□ -1.33
SHP1P34223 snR82snR82 268 nt6.77□□□□□ -1.33
SHP1P34223 TMT1YER175C 900 nt6.77□□□□□ -1.33
SHP1P34223 MTC2YKL098W 1074 nt6.77□□□□□ -1.33
SHP1P34223 YLR123CYLR123C 330 nt6.77□□□□□ -1.33
SHP1P34223 YNL042W-BYNL042W-B 258 nt6.77□□□□□ -1.33
SHP1P34223 MRPS12YNR036C 462 nt6.77□□□□□ -1.33
SHP1P34223 PRY3YJL078C 2646 nt6.77□□□□□ -1.33
SHP1P34223 PYC2YBR218C 3543 nt6.76□□□□□ -1.33
SHP1P34223 YDL129WYDL129W 876 nt6.76□□□□□ -1.33
SHP1P34223 RPN11YFR004W 921 nt6.76□□□□□ -1.33
SHP1P34223 RKI1YOR095C 777 nt6.76□□□□□ -1.33
SHP1P34223 RGT2YDL138W 2292 nt6.75□□□□□ -1.33
SHP1P34223 EFM1YHL039W 1758 nt6.75□□□□□ -1.33
SHP1P34223 SEC23YPR181C 2307 nt6.75□□□□□ -1.33
SHP1P34223 COR1YBL045C 1374 nt6.75□□□□□ -1.33
SHP1P34223 YDR034W-BYDR034W-B 156 nt6.75□□□□□ -1.33
SHP1P34223 SSP120YLR250W 705 nt6.75□□□□□ -1.33
SHP1P34223 YML012C-AYML012C-A 378 nt6.75□□□□□ -1.33
SHP1P34223 KTR1YOR099W 1182 nt6.75□□□□□ -1.33
SHP1P34223 TKL2YBR117C 2046 nt6.75□□□□□ -1.33
SHP1P34223 COX20YDR231C 618 nt6.74□□□□□ -1.33
SHP1P34223 RPE1YJL121C 717 nt6.74□□□□□ -1.33
SHP1P34223 LDS1YAL018C 978 nt6.74□□□□□ -1.33
SHP1P34223 HEL1YKR017C 1656 nt6.74□□□□□ -1.33
SHP1P34223 ATG22YCL038C 1587 nt6.74□□□□□ -1.33
SHP1P34223 YTP1YNL237W 1380 nt6.73□□□□□ -1.33
SHP1P34223 RRS1YOR294W 612 nt6.73□□□□□ -1.33
SHP1P34223 YCK1YHR135C 1617 nt6.72□□□□□ -1.33
SHP1P34223 YHR131CYHR131C 2553 nt6.72□□□□□ -1.33
SHP1P34223 CDC19YAL038W 1503 nt6.72□□□□□ -1.33
SHP1P34223 QCR8YJL166W 285 nt6.72□□□□□ -1.33
SHP1P34223 PEX13YLR191W 1161 nt6.72□□□□□ -1.33
SHP1P34223 CIN4YMR138W 576 nt6.72□□□□□ -1.33
SHP1P34223 IDP3YNL009W 1263 nt6.72□□□□□ -1.33
SHP1P34223 IES2YNL215W 963 nt6.72□□□□□ -1.33
SHP1P34223 YMC1YPR058W 924 nt6.72□□□□□ -1.33
SHP1P34223 NHA1YLR138W 2958 nt6.71□□□□□ -1.34
SHP1P34223 UTR2YEL040W 1404 nt6.71□□□□□ -1.34
SHP1P34223 EXG1YLR300W 1347 nt6.71□□□□□ -1.34
SHP1P34223 YPR204WYPR204W 3099 nt6.7□□□□□ -1.34
SHP1P34223 YJL045WYJL045W 1905 nt6.7□□□□□ -1.34
SHP1P34223 HRQ1YDR291W 3234 nt6.7□□□□□ -1.34
SHP1P34223 ECM27YJR106W 2178 nt6.7□□□□□ -1.34
SHP1P34223 POP5YAL033W 522 nt6.7□□□□□ -1.34
SHP1P34223 SNO4YMR322C 714 nt6.7□□□□□ -1.34
SHP1P34223 ELA1YNL230C 1140 nt6.7□□□□□ -1.34
SHP1P34223 HSP33YOR391C 714 nt6.7□□□□□ -1.34
SHP1P34223 HSP32YPL280W 714 nt6.7□□□□□ -1.34
SHP1P34223 ATG12YBR217W 561 nt6.7□□□□□ -1.34
SHP1P34223 GEF1YJR040W 2340 nt6.7□□□□□ -1.34
SHP1P34223 EDC3YEL015W 1656 nt6.69□□□□□ -1.34
SHP1P34223 RPL10YLR075W 666 nt6.69□□□□□ -1.34
SHP1P34223 MRPS16YPL013C 366 nt6.69□□□□□ -1.34
SHP1P34223 PYK2YOR347C 1521 nt6.69□□□□□ -1.34
SHP1P34223 KDX1YKL161C 1302 nt6.69□□□□□ -1.34
SHP1P34223 PRI2YKL045W 1587 nt6.69□□□□□ -1.34
SHP1P34223 KIN1YDR122W 3195 nt6.69□□□□□ -1.34
SHP1P34223 PXL1YKR090W 2121 nt6.68□□□□□ -1.34
SHP1P34223 SMC5YOL034W 3282 nt6.68□□□□□ -1.34
SHP1P34223 YEL068CYEL068C 333 nt6.68□□□□□ -1.34
SHP1P34223 LEU5YHR002W 1074 nt6.68□□□□□ -1.34
SHP1P34223 MRPS5YBR251W 924 nt6.68□□□□□ -1.34
SHP1P34223 HST3YOR025W 1344 nt6.68□□□□□ -1.34
SHP1P34223 WHI2YOR043W 1461 nt6.67□□□□□ -1.34
SHP1P34223 TPO3YPR156C 1869 nt6.67□□□□□ -1.34
SHP1P34223 SUF5tG(CCC)O 72 nt6.67□□□□□ -1.34
SHP1P34223 MRK1YDL079C 1506 nt6.66□□□□□ -1.34
SHP1P34223 YDL119CYDL119C 924 nt6.66□□□□□ -1.34
SHP1P34223 RPR2YIR015W 435 nt6.66□□□□□ -1.34
SHP1P34223 OPI8YKR035C 642 nt6.66□□□□□ -1.34
SHP1P34223 PUS5YLR165C 765 nt6.66□□□□□ -1.34
SHP1P34223 TSA1YML028W 591 nt6.66□□□□□ -1.34
SHP1P34223 YKR023WYKR023W 1593 nt6.65□□□□□ -1.34
SHP1P34223 TOS2YGR221C 1869 nt6.65□□□□□ -1.34
SHP1P34223 RHB1YCR027C 630 nt6.65□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 53.5 ms