Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 SQSTM1-206ENST00000466342 808 ntTSL 212.25□□□□□ -0.453e-8■□□□□ 8.1
SND1Q7KZF4 MS4A3-206ENST00000528298 486 ntTSL 312.11□□□□□ -0.475e-7■□□□□ 8.1
SND1Q7KZF4 MTA2-202ENST00000524902 2577 ntTSL 1 (best) BASIC12.1□□□□□ -0.472e-6■□□□□ 8.1
SND1Q7KZF4 G3BP2-211ENST00000507947 665 ntTSL 211.97□□□□□ -0.492e-6■□□□□ 8.1
SND1Q7KZF4 SQSTM1-203ENST00000422245 628 ntTSL 411.9□□□□□ -0.53e-8■□□□□ 8.1
SND1Q7KZF4 DAZAP2-203ENST00000436900 1811 ntTSL 511.9□□□□□ -0.52e-9■□□□□ 8.1
SND1Q7KZF4 AP2B1-218ENST00000619183 1595 ntTSL 511.76□□□□□ -0.532e-6■□□□□ 8.1
SND1Q7KZF4 DAZAP2-205ENST00000449723 2098 ntTSL 5 BASIC11.74□□□□□ -0.532e-9■□□□□ 8.1
SND1Q7KZF4 DAZAP2-215ENST00000604900 1045 ntTSL 3 BASIC11.48□□□□□ -0.572e-9■□□□□ 8.1
SND1Q7KZF4 DGUOK-204ENST00000462551 573 ntTSL 210.76□□□□□ -0.692e-6■□□□□ 8.1
SND1Q7KZF4 DGUOK-206ENST00000489796 692 ntTSL 310.74□□□□□ -0.692e-6■□□□□ 8.1
SND1Q7KZF4 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC10.55□□□□□ -0.722e-9■□□□□ 8.1
SND1Q7KZF4 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC10.55□□□□□ -0.722e-9■□□□□ 8.1
SND1Q7KZF4 ARPC3-201ENST00000228825 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.732e-6■□□□□ 8.1
SND1Q7KZF4 CENPK-205ENST00000505960 834 ntTSL 510.26□□□□□ -0.773e-8■□□□□ 8.1
SND1Q7KZF4 ATP5F1-203ENST00000464154 621 ntTSL 210.23□□□□□ -0.774e-13■□□□□ 8.1
SND1Q7KZF4 RPS17-206ENST00000560612 1877 ntTSL 29.78□□□□□ -0.844e-32■□□□□ 8.1
SND1Q7KZF4 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC9.29□□□□□ -0.923e-8■□□□□ 8.1
SND1Q7KZF4 ARPC3-203ENST00000467622 1098 ntTSL 59.27□□□□□ -0.932e-6■□□□□ 8.1
SND1Q7KZF4 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.942e-9■□□□□ 8.1
SND1Q7KZF4 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC9.01□□□□□ -0.974e-32■□□□□ 8.1
SND1Q7KZF4 G3BP2-210ENST00000507745 584 ntTSL 48.57□□□□□ -1.042e-6■□□□□ 8.1
SND1Q7KZF4 RPL5-203ENST00000461952 1116 ntTSL 28.56□□□□□ -1.042e-15■□□□□ 8.1
SND1Q7KZF4 DAZAP2-212ENST00000551919 485 ntTSL 48.5□□□□□ -1.052e-9■□□□□ 8.1
SND1Q7KZF4 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC8.4□□□□□ -1.062e-9■□□□□ 8.1
SND1Q7KZF4 ADH5-209ENST00000512604 331 ntTSL 38.31□□□□□ -1.081e-10■□□□□ 8.1
SND1Q7KZF4 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC8.27□□□□□ -1.093e-8■□□□□ 8.1
SND1Q7KZF4 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC8.26□□□□□ -1.092e-9■□□□□ 8.1
SND1Q7KZF4 RPS17-207ENST00000560639 932 ntTSL 58.15□□□□□ -1.14e-32■□□□□ 8.1
SND1Q7KZF4 CENPK-217ENST00000515873 279 ntTSL 57.74□□□□□ -1.173e-8■□□□□ 8.1
SND1Q7KZF4 PGD-210ENST00000498356 790 ntTSL 37.73□□□□□ -1.175e-7■□□□□ 8.1
SND1Q7KZF4 CENPK-212ENST00000510768 725 ntTSL 57.58□□□□□ -1.23e-8■□□□□ 8.1
SND1Q7KZF4 ARPC3-206ENST00000476566 362 ntTSL 27.54□□□□□ -1.22e-6■□□□□ 8.1
SND1Q7KZF4 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.212e-9■□□□□ 8.1
SND1Q7KZF4 ADH5-205ENST00000505652 623 ntTSL 57.27□□□□□ -1.251e-10■□□□□ 8.1
SND1Q7KZF4 PDCD6IP-208ENST00000465122 894 ntTSL 37.24□□□□□ -1.252e-6■□□□□ 8.1
SND1Q7KZF4 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC7.2□□□□□ -1.262e-6■□□□□ 8.1
SND1Q7KZF4 ARPC3-208ENST00000548878 532 ntTSL 57.14□□□□□ -1.272e-6■□□□□ 8.1
SND1Q7KZF4 AP2B1-201ENST00000587805 690 ntTSL 27□□□□□ -1.292e-6■□□□□ 8.1
SND1Q7KZF4 ARPC3-202ENST00000426440 349 ntTSL 36.94□□□□□ -1.32e-6■□□□□ 8.1
SND1Q7KZF4 AP2B1-203ENST00000588116 779 ntTSL 56.68□□□□□ -1.342e-6■□□□□ 8.1
SND1Q7KZF4 ARPC3-207ENST00000547365 308 ntTSL 26.54□□□□□ -1.362e-6■□□□□ 8.1
SND1Q7KZF4 PDCD6IP-209ENST00000473593 540 ntTSL 26.2□□□□□ -1.422e-6■□□□□ 8.1
SND1Q7KZF4 DGUOK-207ENST00000493055 593 ntTSL 25.81□□□□□ -1.482e-6■□□□□ 8.1
SND1Q7KZF4 PDCD6IP-214ENST00000489869 842 ntTSL 25.56□□□□□ -1.522e-6■□□□□ 8.1
SND1Q7KZF4 G3BP2-215ENST00000510902 338 ntTSL 35.53□□□□□ -1.522e-6■□□□□ 8.1
SND1Q7KZF4 IMPDH2-209ENST00000484872 643 ntTSL 25.46□□□□□ -1.542e-6■□□□□ 8.1
SND1Q7KZF4 RPL5-204ENST00000470843 694 ntTSL 35.36□□□□□ -1.552e-15■□□□□ 8.1
SND1Q7KZF4 RPS17-208ENST00000561068 522 ntTSL 34.88□□□□□ -1.634e-32■□□□□ 8.1
SND1Q7KZF4 RPS17-202ENST00000558397 583 ntTSL 34.82□□□□□ -1.644e-32■□□□□ 8.1
SND1Q7KZF4 XPO1-219ENST00000481073 3706 ntTSL 24.82□□□□□ -1.642e-9■□□□□ 8.1
SND1Q7KZF4 RPS4XP22-201ENST00000480755 780 ntBASIC4.44□□□□□ -1.75e-7■□□□□ 8.1
SND1Q7KZF4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.17□□□□□ -1.742e-9■□□□□ 8.1
SND1Q7KZF4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.334e-14■□□□□ 8.1
SND1Q7KZF4 SEMA3B-205ENST00000434030 1011 ntTSL 322.82■■□□□ 1.246e-7■□□□□ 8
SND1Q7KZF4 SEMA3B-206ENST00000439487 594 ntTSL 320.19■□□□□ 0.826e-7■□□□□ 8
SND1Q7KZF4 PNPLA6-210ENST00000595176 999 ntTSL 319.05■□□□□ 0.646e-7■□□□□ 8
SND1Q7KZF4 PNPLA6-217ENST00000599311 1005 ntTSL 517.97■□□□□ 0.476e-7■□□□□ 8
SND1Q7KZF4 NOP56-220ENST00000616692 2662 ntTSL 1 (best)16.47■□□□□ 0.236e-7■□□□□ 8
SND1Q7KZF4 NOP56-219ENST00000612233 2980 nt14.87□□□□□ -0.036e-7■□□□□ 8
SND1Q7KZF4 NOP56-216ENST00000492135 1143 ntTSL 1 (best)14.74□□□□□ -0.056e-7■□□□□ 8
SND1Q7KZF4 NOP56-202ENST00000415272 1628 ntTSL 510.5□□□□□ -0.736e-7■□□□□ 8
SND1Q7KZF4 NOP56-207ENST00000467196 1320 ntTSL 58.86□□□□□ -0.996e-7■□□□□ 8
SND1Q7KZF4 NOP56-214ENST00000484998 998 ntTSL 58.14□□□□□ -1.116e-7■□□□□ 8
SND1Q7KZF4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.222e-9■□□□□ 8
SND1Q7KZF4 GORASP2-202ENST00000442798 1976 ntTSL 215.22■□□□□ 0.032e-9■□□□□ 8
SND1Q7KZF4 GORASP2-207ENST00000486498 2096 ntTSL 213.76□□□□□ -0.212e-9■□□□□ 8
Retrieved 67 of 13,567 protein–RNA pairs in 302.2 ms