Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 COX10YPL172C 1389 nt5.98□□□□□ -1.45
CUP9P41817 HEL1YKR017C 1656 nt5.98□□□□□ -1.45
CUP9P41817 PUS7YOR243C 2031 nt5.98□□□□□ -1.45
CUP9P41817 YDL177CYDL177C 513 nt5.97□□□□□ -1.45
CUP9P41817 TRS31YDR472W 852 nt5.97□□□□□ -1.45
CUP9P41817 HHY1YEL059W 309 nt5.97□□□□□ -1.45
CUP9P41817 MSP1YGR028W 1089 nt5.97□□□□□ -1.45
CUP9P41817 CBR1YIL043C 855 nt5.97□□□□□ -1.45
CUP9P41817 COQ1YBR003W 1422 nt5.97□□□□□ -1.45
CUP9P41817 YHR020WYHR020W 2067 nt5.97□□□□□ -1.45
CUP9P41817 PPM2YOL141W 2088 nt5.97□□□□□ -1.45
CUP9P41817 TUF1YOR187W 1314 nt5.97□□□□□ -1.45
CUP9P41817 YGR068W-AYGR068W-A 96 nt5.96□□□□□ -1.46
CUP9P41817 SNT309YPR101W 528 nt5.96□□□□□ -1.46
CUP9P41817 YCR061WYCR061W 1896 nt5.95□□□□□ -1.46
CUP9P41817 CDC13YDL220C 2775 nt5.95□□□□□ -1.46
CUP9P41817 URH1YDR400W 1023 nt5.95□□□□□ -1.46
CUP9P41817 YMR295CYMR295C 594 nt5.95□□□□□ -1.46
CUP9P41817 MRPL10YNL284C 969 nt5.95□□□□□ -1.46
CUP9P41817 CTF19YPL018W 1110 nt5.95□□□□□ -1.46
CUP9P41817 CCT8YJL008C 1707 nt5.94□□□□□ -1.46
CUP9P41817 PPS1YBR276C 2424 nt5.94□□□□□ -1.46
CUP9P41817 SMC5YOL034W 3282 nt5.94□□□□□ -1.46
CUP9P41817 YLR157W-EYLR157W-E 165 nt5.94□□□□□ -1.46
CUP9P41817 SEC23YPR181C 2307 nt5.94□□□□□ -1.46
CUP9P41817 SRF1YDL133W 1314 nt5.94□□□□□ -1.46
CUP9P41817 PAC2YER007W 1557 nt5.93□□□□□ -1.46
CUP9P41817 EFM1YHL039W 1758 nt5.93□□□□□ -1.46
CUP9P41817 MCH2YKL221W 1422 nt5.93□□□□□ -1.46
CUP9P41817 GPH1YPR160W 2709 nt5.93□□□□□ -1.46
CUP9P41817 CEM1YER061C 1329 nt5.93□□□□□ -1.46
CUP9P41817 AMN1YBR158W 1650 nt5.92□□□□□ -1.46
CUP9P41817 PPH22YDL188C 1134 nt5.92□□□□□ -1.46
CUP9P41817 MTR3YGR158C 753 nt5.92□□□□□ -1.46
CUP9P41817 ATG36YJL185C 882 nt5.92□□□□□ -1.46
CUP9P41817 RFC4YOL094C 972 nt5.92□□□□□ -1.46
CUP9P41817 KIN1YDR122W 3195 nt5.91□□□□□ -1.46
CUP9P41817 FAL1YDR021W 1200 nt5.91□□□□□ -1.46
CUP9P41817 SGF29YCL010C 780 nt5.91□□□□□ -1.46
CUP9P41817 YMR279CYMR279C 1623 nt5.91□□□□□ -1.46
CUP9P41817 MRPL28YDR462W 444 nt5.9□□□□□ -1.46
CUP9P41817 LYS1YIR034C 1122 nt5.9□□□□□ -1.46
CUP9P41817 YNL097W-AYNL097W-A 156 nt5.9□□□□□ -1.46
CUP9P41817 RUF23RUF23 254 nt5.9□□□□□ -1.46
CUP9P41817 ARC35YNR035C 1029 nt5.9□□□□□ -1.46
CUP9P41817 MSO1YNR049C 633 nt5.9□□□□□ -1.46
CUP9P41817 EDC3YEL015W 1656 nt5.9□□□□□ -1.47
CUP9P41817 SLA2YNL243W 2907 nt5.89□□□□□ -1.47
CUP9P41817 CCT3YJL014W 1605 nt5.89□□□□□ -1.47
CUP9P41817 CYB2YML054C 1776 nt5.89□□□□□ -1.47
CUP9P41817 MED6YHR058C 888 nt5.89□□□□□ -1.47
CUP9P41817 MPC2YHR162W 390 nt5.89□□□□□ -1.47
CUP9P41817 COQ3YOL096C 939 nt5.89□□□□□ -1.47
CUP9P41817 YPL257WYPL257W 582 nt5.89□□□□□ -1.47
CUP9P41817 GSH1YJL101C 2037 nt5.88□□□□□ -1.47
CUP9P41817 ERS1YCR075C 783 nt5.88□□□□□ -1.47
CUP9P41817 TAH11YJR046W 1815 nt5.88□□□□□ -1.47
CUP9P41817 PRE3YJL001W 648 nt5.87□□□□□ -1.47
CUP9P41817 NTG1YAL015C 1200 nt5.87□□□□□ -1.47
CUP9P41817 ECM27YJR106W 2178 nt5.87□□□□□ -1.47
CUP9P41817 DSF1YEL070W 1509 nt5.86□□□□□ -1.47
CUP9P41817 YNR073CYNR073C 1509 nt5.86□□□□□ -1.47
CUP9P41817 PTC3YBL056W 1407 nt5.86□□□□□ -1.47
CUP9P41817 YFL013W-AYFL013W-A 804 nt5.86□□□□□ -1.47
CUP9P41817 RDN5-2RDN5-2 119 nt5.86□□□□□ -1.47
CUP9P41817 RDN5-3RDN5-3 119 nt5.86□□□□□ -1.47
CUP9P41817 RDN5-4RDN5-4 119 nt5.86□□□□□ -1.47
CUP9P41817 RDN5-5RDN5-5 119 nt5.86□□□□□ -1.47
CUP9P41817 IRC11YOR013W 471 nt5.86□□□□□ -1.47
CUP9P41817 HBN1YCL026C-B 582 nt5.86□□□□□ -1.47
CUP9P41817 YPR196WYPR196W 1413 nt5.85□□□□□ -1.47
CUP9P41817 HVG1YER039C 750 nt5.85□□□□□ -1.47
CUP9P41817 YJR146WYJR146W 354 nt5.85□□□□□ -1.47
CUP9P41817 SRL2YLR082C 1179 nt5.85□□□□□ -1.47
CUP9P41817 OPI11YPR044C 354 nt5.85□□□□□ -1.47
CUP9P41817 STT3YGL022W 2157 nt5.84□□□□□ -1.47
CUP9P41817 YLL066CYLL066C 3618 nt5.84□□□□□ -1.47
CUP9P41817 YLL067CYLL067C 3618 nt5.84□□□□□ -1.47
CUP9P41817 ARE2YNR019W 1929 nt5.84□□□□□ -1.47
CUP9P41817 TIM22YDL217C 624 nt5.84□□□□□ -1.47
CUP9P41817 VPS24YKL041W 675 nt5.84□□□□□ -1.47
CUP9P41817 RPS28AYOR167C 204 nt5.84□□□□□ -1.47
CUP9P41817 DFR1YOR236W 636 nt5.84□□□□□ -1.47
CUP9P41817 AGP2YBR132C 1791 nt5.84□□□□□ -1.47
CUP9P41817 ERG1YGR175C 1491 nt5.83□□□□□ -1.48
CUP9P41817 YBR241CYBR241C 1467 nt5.83□□□□□ -1.48
CUP9P41817 TOS2YGR221C 1869 nt5.83□□□□□ -1.48
CUP9P41817 TRR1YDR353W 960 nt5.83□□□□□ -1.48
CUP9P41817 MIA40YKL195W 1212 nt5.83□□□□□ -1.48
CUP9P41817 ZRT2YLR130C 1269 nt5.83□□□□□ -1.48
CUP9P41817 ADH5YBR145W 1056 nt5.83□□□□□ -1.48
CUP9P41817 RQC1YDR333C 2172 nt5.83□□□□□ -1.48
CUP9P41817 ICL2YPR006C 1728 nt5.82□□□□□ -1.48
CUP9P41817 YOR389WYOR389W 1875 nt5.82□□□□□ -1.48
CUP9P41817 tG(GCC)BtG(GCC)B 71 nt5.82□□□□□ -1.48
CUP9P41817 SUF16tG(GCC)C 71 nt5.82□□□□□ -1.48
CUP9P41817 tG(GCC)D1tG(GCC)D1 71 nt5.82□□□□□ -1.48
CUP9P41817 tG(GCC)D2tG(GCC)D2 71 nt5.82□□□□□ -1.48
CUP9P41817 tG(GCC)EtG(GCC)E 71 nt5.82□□□□□ -1.48
CUP9P41817 SUF20tG(GCC)F1 71 nt5.82□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 25.9 ms