Protein–RNA interactions for Protein: P40550

PDR11, ATP-dependent permease PDR11, yeastyeast

Predictions only

Length 1,411 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDR11P40550 SUF16tG(GCC)C 71 nt8.96□□□□□ -0.98
PDR11P40550 tG(GCC)D1tG(GCC)D1 71 nt8.96□□□□□ -0.98
PDR11P40550 tG(GCC)D2tG(GCC)D2 71 nt8.96□□□□□ -0.98
PDR11P40550 tG(GCC)EtG(GCC)E 71 nt8.96□□□□□ -0.98
PDR11P40550 SUF20tG(GCC)F1 71 nt8.96□□□□□ -0.98
PDR11P40550 tG(GCC)F2tG(GCC)F2 71 nt8.96□□□□□ -0.98
PDR11P40550 tG(GCC)G1tG(GCC)G1 71 nt8.96□□□□□ -0.98
PDR11P40550 tG(GCC)G2tG(GCC)G2 71 nt8.96□□□□□ -0.98
PDR11P40550 tG(GCC)J1tG(GCC)J1 71 nt8.96□□□□□ -0.98
PDR11P40550 SUF23tG(GCC)J2 71 nt8.96□□□□□ -0.98
PDR11P40550 tG(GCC)MtG(GCC)M 71 nt8.96□□□□□ -0.98
PDR11P40550 tG(GCC)O1tG(GCC)O1 71 nt8.96□□□□□ -0.98
PDR11P40550 SUF17tG(GCC)O2 71 nt8.96□□□□□ -0.98
PDR11P40550 tG(GCC)P1tG(GCC)P1 71 nt8.96□□□□□ -0.98
PDR11P40550 tG(GCC)P2tG(GCC)P2 71 nt8.96□□□□□ -0.98
PDR11P40550 SNF4YGL115W 969 nt8.96□□□□□ -0.98
PDR11P40550 NAS6YGR232W 687 nt8.96□□□□□ -0.98
PDR11P40550 RVB2YPL235W 1416 nt8.95□□□□□ -0.98
PDR11P40550 YDL172CYDL172C 480 nt8.94□□□□□ -0.98
PDR11P40550 YJR146WYJR146W 354 nt8.94□□□□□ -0.98
PDR11P40550 CSL4YNL232W 879 nt8.94□□□□□ -0.98
PDR11P40550 PRB1YEL060C 1908 nt8.94□□□□□ -0.98
PDR11P40550 ERG1YGR175C 1491 nt8.93□□□□□ -0.98
PDR11P40550 LYS1YIR034C 1122 nt8.92□□□□□ -0.98
PDR11P40550 ATG36YJL185C 882 nt8.92□□□□□ -0.98
PDR11P40550 RGD2YFL047W 2145 nt8.92□□□□□ -0.98
PDR11P40550 TOD6YBL054W 1578 nt8.92□□□□□ -0.98
PDR11P40550 SYF2YGR129W 648 nt8.91□□□□□ -0.98
PDR11P40550 ERP5YHR110W 639 nt8.91□□□□□ -0.98
PDR11P40550 GTO3YMR251W 1101 nt8.91□□□□□ -0.98
PDR11P40550 YPL257WYPL257W 582 nt8.91□□□□□ -0.98
PDR11P40550 COX10YPL172C 1389 nt8.91□□□□□ -0.98
PDR11P40550 FAL1YDR021W 1200 nt8.9□□□□□ -0.98
PDR11P40550 YFL013W-AYFL013W-A 804 nt8.9□□□□□ -0.98
PDR11P40550 EGD2YHR193C 525 nt8.9□□□□□ -0.98
PDR11P40550 ELA1YNL230C 1140 nt8.9□□□□□ -0.98
PDR11P40550 PRY3YJL078C 2646 nt8.9□□□□□ -0.99
PDR11P40550 ERS1YCR075C 783 nt8.88□□□□□ -0.99
PDR11P40550 YNL017CYNL017C 339 nt8.88□□□□□ -0.99
PDR11P40550 RFC4YOL094C 972 nt8.88□□□□□ -0.99
PDR11P40550 YOR012WYOR012W 414 nt8.88□□□□□ -0.99
PDR11P40550 YDL218WYDL218W 954 nt8.88□□□□□ -0.99
PDR11P40550 DON1YDR273W 1098 nt8.87□□□□□ -0.99
PDR11P40550 YLR112WYLR112W 420 nt8.87□□□□□ -0.99
PDR11P40550 YRF1-3YGR296W 5580 nt8.87□□□□□ -0.99
PDR11P40550 YRF1-6YNL339C 5580 nt8.87□□□□□ -0.99
PDR11P40550 YRF1-7YPL283C 5580 nt8.87□□□□□ -0.99
PDR11P40550 AMN1YBR158W 1650 nt8.86□□□□□ -0.99
PDR11P40550 YER137CYER137C 447 nt8.86□□□□□ -0.99
PDR11P40550 YBR241CYBR241C 1467 nt8.86□□□□□ -0.99
PDR11P40550 CCC2YDR270W 3015 nt8.85□□□□□ -0.99
PDR11P40550 EDE1YBL047C 4146 nt8.84□□□□□ -0.99
PDR11P40550 YCR041WYCR041W 333 nt8.84□□□□□ -0.99
PDR11P40550 SIT4YDL047W 936 nt8.84□□□□□ -0.99
PDR11P40550 BUD32YGR262C 786 nt8.84□□□□□ -0.99
PDR11P40550 RDN5-2RDN5-2 119 nt8.84□□□□□ -0.99
PDR11P40550 RDN5-3RDN5-3 119 nt8.84□□□□□ -0.99
PDR11P40550 RDN5-4RDN5-4 119 nt8.84□□□□□ -0.99
PDR11P40550 RDN5-5RDN5-5 119 nt8.84□□□□□ -0.99
PDR11P40550 SUR7YML052W 909 nt8.84□□□□□ -0.99
PDR11P40550 SCS7YMR272C 1155 nt8.84□□□□□ -0.99
PDR11P40550 TSR3YOR006C 942 nt8.84□□□□□ -0.99
PDR11P40550 PPT1YGR123C 1542 nt8.83□□□□□ -1
PDR11P40550 YNL200CYNL200C 741 nt8.83□□□□□ -1
PDR11P40550 DFR1YOR236W 636 nt8.83□□□□□ -1
PDR11P40550 POX1YGL205W 2247 nt8.83□□□□□ -1
PDR11P40550 GNP1YDR508C 1992 nt8.83□□□□□ -1
PDR11P40550 NPP1YCR026C 2229 nt8.82□□□□□ -1
PDR11P40550 MTR3YGR158C 753 nt8.82□□□□□ -1
PDR11P40550 ENV7YPL236C 1095 nt8.82□□□□□ -1
PDR11P40550 YRF1-1YDR545W 5391 nt8.82□□□□□ -1
PDR11P40550 YRF1-5YLR467W 5391 nt8.82□□□□□ -1
PDR11P40550 YRF1-8YOR396W 5391 nt8.82□□□□□ -1
PDR11P40550 ITR1YDR497C 1755 nt8.82□□□□□ -1
PDR11P40550 MDE1YJR024C 735 nt8.81□□□□□ -1
PDR11P40550 RUF23RUF23 254 nt8.81□□□□□ -1
PDR11P40550 AMD2YDR242W 1650 nt8.81□□□□□ -1
PDR11P40550 YDR015CYDR015C 240 nt8.8□□□□□ -1
PDR11P40550 YNL285WYNL285W 372 nt8.8□□□□□ -1
PDR11P40550 OPI11YPR044C 354 nt8.8□□□□□ -1
PDR11P40550 PMA2YPL036W 2844 nt8.8□□□□□ -1
PDR11P40550 NHA1YLR138W 2958 nt8.8□□□□□ -1
PDR11P40550 MNS1YJR131W 1650 nt8.8□□□□□ -1
PDR11P40550 LPD1YFL018C 1500 nt8.8□□□□□ -1
PDR11P40550 MIP1YOR330C 3765 nt8.8□□□□□ -1
PDR11P40550 DYS1YHR068W 1164 nt8.8□□□□□ -1
PDR11P40550 YNL120CYNL120C 486 nt8.8□□□□□ -1
PDR11P40550 YPL250W-AYPL250W-A 288 nt8.8□□□□□ -1
PDR11P40550 FRA1YLL029W 2250 nt8.79□□□□□ -1
PDR11P40550 MLS1YNL117W 1665 nt8.79□□□□□ -1
PDR11P40550 UTP4YDR324C 2331 nt8.78□□□□□ -1
PDR11P40550 AAT2YLR027C 1257 nt8.78□□□□□ -1
PDR11P40550 YLR126CYLR126C 756 nt8.78□□□□□ -1
PDR11P40550 HEM1YDR232W 1647 nt8.78□□□□□ -1
PDR11P40550 MTF2YDL044C 1323 nt8.77□□□□□ -1
PDR11P40550 ECM14YHR132C 1293 nt8.77□□□□□ -1.01
PDR11P40550 GCV3YAL044C 513 nt8.77□□□□□ -1.01
PDR11P40550 YMR253CYMR253C 1245 nt8.77□□□□□ -1.01
PDR11P40550 CCT3YJL014W 1605 nt8.77□□□□□ -1.01
PDR11P40550 PEX31YGR004W 1389 nt8.76□□□□□ -1.01
Retrieved 100 of 7,029 protein–RNA pairs in 50.2 ms