Protein–RNA interactions for Protein: P38735

VMR1, ABC transporter ATP-binding protein/permease VMR1, yeastyeast

Predictions only

Length 1,592 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMR1P38735 tG(GCC)F2tG(GCC)F2 71 nt9.05□□□□□ -0.96
VMR1P38735 tG(GCC)G1tG(GCC)G1 71 nt9.05□□□□□ -0.96
VMR1P38735 tG(GCC)G2tG(GCC)G2 71 nt9.05□□□□□ -0.96
VMR1P38735 tG(GCC)J1tG(GCC)J1 71 nt9.05□□□□□ -0.96
VMR1P38735 SUF23tG(GCC)J2 71 nt9.05□□□□□ -0.96
VMR1P38735 tG(GCC)MtG(GCC)M 71 nt9.05□□□□□ -0.96
VMR1P38735 tG(GCC)O1tG(GCC)O1 71 nt9.05□□□□□ -0.96
VMR1P38735 SUF17tG(GCC)O2 71 nt9.05□□□□□ -0.96
VMR1P38735 tG(GCC)P1tG(GCC)P1 71 nt9.05□□□□□ -0.96
VMR1P38735 tG(GCC)P2tG(GCC)P2 71 nt9.05□□□□□ -0.96
VMR1P38735 GLC8YMR311C 690 nt9.05□□□□□ -0.96
VMR1P38735 ENB1YOL158C 1821 nt9.04□□□□□ -0.96
VMR1P38735 MRPL28YDR462W 444 nt9.04□□□□□ -0.96
VMR1P38735 YLR126CYLR126C 756 nt9.04□□□□□ -0.96
VMR1P38735 YDL177CYDL177C 513 nt9.03□□□□□ -0.96
VMR1P38735 DFM1YDR411C 1026 nt9.03□□□□□ -0.96
VMR1P38735 TMA46YOR091W 1038 nt9.03□□□□□ -0.96
VMR1P38735 RVB2YPL235W 1416 nt9.03□□□□□ -0.96
VMR1P38735 SIT4YDL047W 936 nt9.03□□□□□ -0.96
VMR1P38735 LYS1YIR034C 1122 nt9.03□□□□□ -0.96
VMR1P38735 TIM22YDL217C 624 nt9.02□□□□□ -0.97
VMR1P38735 MDL2YPL270W 2322 nt9.02□□□□□ -0.97
VMR1P38735 FAL1YDR021W 1200 nt9.01□□□□□ -0.97
VMR1P38735 ENV7YPL236C 1095 nt9.01□□□□□ -0.97
VMR1P38735 FRA1YLL029W 2250 nt9.01□□□□□ -0.97
VMR1P38735 MTF2YDL044C 1323 nt9□□□□□ -0.97
VMR1P38735 YDR015CYDR015C 240 nt9□□□□□ -0.97
VMR1P38735 CTF19YPL018W 1110 nt9□□□□□ -0.97
VMR1P38735 SNT309YPR101W 528 nt9□□□□□ -0.97
VMR1P38735 MLS1YNL117W 1665 nt9□□□□□ -0.97
VMR1P38735 YBR056C-BYBR056C-B 159 nt8.99□□□□□ -0.97
VMR1P38735 GCV3YAL044C 513 nt8.99□□□□□ -0.97
VMR1P38735 SRL2YLR082C 1179 nt8.99□□□□□ -0.97
VMR1P38735 KSH1YNL024C-A 219 nt8.99□□□□□ -0.97
VMR1P38735 MNS1YJR131W 1650 nt8.98□□□□□ -0.97
VMR1P38735 ATG36YJL185C 882 nt8.98□□□□□ -0.97
VMR1P38735 YJR146WYJR146W 354 nt8.98□□□□□ -0.97
VMR1P38735 CCC2YDR270W 3015 nt8.97□□□□□ -0.97
VMR1P38735 YFL013W-AYFL013W-A 804 nt8.97□□□□□ -0.97
VMR1P38735 BUD32YGR262C 786 nt8.97□□□□□ -0.97
VMR1P38735 TSR3YOR006C 942 nt8.97□□□□□ -0.97
VMR1P38735 POX1YGL205W 2247 nt8.96□□□□□ -0.97
VMR1P38735 ECM14YHR132C 1293 nt8.96□□□□□ -0.97
VMR1P38735 YNL285WYNL285W 372 nt8.96□□□□□ -0.97
VMR1P38735 RSC30YHR056C 2652 nt8.96□□□□□ -0.98
VMR1P38735 UTP4YDR324C 2331 nt8.95□□□□□ -0.98
VMR1P38735 SHP1YBL058W 1272 nt8.95□□□□□ -0.98
VMR1P38735 MDE1YJR024C 735 nt8.95□□□□□ -0.98
VMR1P38735 AAT2YLR027C 1257 nt8.95□□□□□ -0.98
VMR1P38735 SNF4YGL115W 969 nt8.94□□□□□ -0.98
VMR1P38735 MRPS12YNR036C 462 nt8.94□□□□□ -0.98
VMR1P38735 MHP1YJL042W 4197 nt8.93□□□□□ -0.98
VMR1P38735 TOK1YJL093C 2076 nt8.93□□□□□ -0.98
VMR1P38735 YET3YDL072C 612 nt8.93□□□□□ -0.98
VMR1P38735 AMD2YDR242W 1650 nt8.93□□□□□ -0.98
VMR1P38735 RPN11YFR004W 921 nt8.92□□□□□ -0.98
VMR1P38735 SPE4YLR146C 903 nt8.92□□□□□ -0.98
VMR1P38735 GTO3YMR251W 1101 nt8.92□□□□□ -0.98
VMR1P38735 PPT1YGR123C 1542 nt8.92□□□□□ -0.98
VMR1P38735 COX10YPL172C 1389 nt8.92□□□□□ -0.98
VMR1P38735 MET2YNL277W 1461 nt8.91□□□□□ -0.98
VMR1P38735 MAK31YCR020C-A 267 nt8.91□□□□□ -0.98
VMR1P38735 LOT6YLR011W 576 nt8.91□□□□□ -0.98
VMR1P38735 IRC11YOR013W 471 nt8.91□□□□□ -0.98
VMR1P38735 YBR241CYBR241C 1467 nt8.9□□□□□ -0.98
VMR1P38735 EDE1YBL047C 4146 nt8.9□□□□□ -0.98
VMR1P38735 UFD1YGR048W 1086 nt8.9□□□□□ -0.99
VMR1P38735 RUF23RUF23 254 nt8.9□□□□□ -0.99
VMR1P38735 PRC1YMR297W 1599 nt8.89□□□□□ -0.99
VMR1P38735 YLR112WYLR112W 420 nt8.89□□□□□ -0.99
VMR1P38735 RFC4YOL094C 972 nt8.89□□□□□ -0.99
VMR1P38735 DFR1YOR236W 636 nt8.89□□□□□ -0.99
VMR1P38735 TOD6YBL054W 1578 nt8.89□□□□□ -0.99
VMR1P38735 NUP84YDL116W 2181 nt8.88□□□□□ -0.99
VMR1P38735 AMN1YBR158W 1650 nt8.88□□□□□ -0.99
VMR1P38735 HRQ1YDR291W 3234 nt8.87□□□□□ -0.99
VMR1P38735 RPL10YLR075W 666 nt8.87□□□□□ -0.99
VMR1P38735 YCR041WYCR041W 333 nt8.86□□□□□ -0.99
VMR1P38735 RDN5-2RDN5-2 119 nt8.86□□□□□ -0.99
VMR1P38735 RDN5-3RDN5-3 119 nt8.86□□□□□ -0.99
VMR1P38735 RDN5-4RDN5-4 119 nt8.86□□□□□ -0.99
VMR1P38735 RDN5-5RDN5-5 119 nt8.86□□□□□ -0.99
VMR1P38735 PRB1YEL060C 1908 nt8.86□□□□□ -0.99
VMR1P38735 YJR084WYJR084W 1272 nt8.86□□□□□ -0.99
VMR1P38735 MTC2YKL098W 1074 nt8.86□□□□□ -0.99
VMR1P38735 SEC24YIL109C 2781 nt8.86□□□□□ -0.99
VMR1P38735 snR82snR82 268 nt8.85□□□□□ -0.99
VMR1P38735 MTR3YGR158C 753 nt8.85□□□□□ -0.99
VMR1P38735 RPS5YJR123W 678 nt8.85□□□□□ -0.99
VMR1P38735 OPI11YPR044C 354 nt8.85□□□□□ -0.99
VMR1P38735 YRF1-3YGR296W 5580 nt8.84□□□□□ -0.99
VMR1P38735 YRF1-6YNL339C 5580 nt8.84□□□□□ -0.99
VMR1P38735 YRF1-7YPL283C 5580 nt8.84□□□□□ -0.99
VMR1P38735 GON7YJL184W 372 nt8.84□□□□□ -0.99
VMR1P38735 CHA1YCL064C 1083 nt8.83□□□□□ -1
VMR1P38735 YOR012WYOR012W 414 nt8.83□□□□□ -1
VMR1P38735 SFP1YLR403W 2052 nt8.82□□□□□ -1
VMR1P38735 AIM2YAL049C 741 nt8.82□□□□□ -1
VMR1P38735 CAF40YNL288W 1122 nt8.82□□□□□ -1
VMR1P38735 ERS1YCR075C 783 nt8.82□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 82.3 ms