Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
GRIN3BO60391 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC30.78■■■□□ 2.52
GRIN3BO60391 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC30.78■■■□□ 2.52
GRIN3BO60391 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
GRIN3BO60391 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
GRIN3BO60391 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
GRIN3BO60391 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC30.77■■■□□ 2.52
GRIN3BO60391 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC30.77■■■□□ 2.52
GRIN3BO60391 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.76■■■□□ 2.52
GRIN3BO60391 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
GRIN3BO60391 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
GRIN3BO60391 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
GRIN3BO60391 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
GRIN3BO60391 RARRES2P6-201ENST00000567333 442 ntBASIC30.75■■■□□ 2.51
GRIN3BO60391 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC30.75■■■□□ 2.51
GRIN3BO60391 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
GRIN3BO60391 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC30.74■■■□□ 2.51
GRIN3BO60391 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC30.74■■■□□ 2.51
GRIN3BO60391 AC110285.6-201ENST00000617652 491 ntBASIC30.74■■■□□ 2.51
GRIN3BO60391 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
GRIN3BO60391 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.74■■■□□ 2.51
GRIN3BO60391 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
GRIN3BO60391 AC131281.2-201ENST00000520478 145 ntBASIC30.73■■■□□ 2.51
GRIN3BO60391 TRIR-202ENST00000588213 841 ntTSL 3 BASIC30.72■■■□□ 2.51
GRIN3BO60391 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC30.71■■■□□ 2.51
GRIN3BO60391 AL136116.3-201ENST00000402907 1138 ntBASIC30.71■■■□□ 2.51
GRIN3BO60391 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
GRIN3BO60391 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC30.71■■■□□ 2.51
GRIN3BO60391 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.7■■■□□ 2.51
GRIN3BO60391 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
GRIN3BO60391 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
GRIN3BO60391 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.51
GRIN3BO60391 AC104564.3-201ENST00000582367 638 ntBASIC30.7■■■□□ 2.51
GRIN3BO60391 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
GRIN3BO60391 RPP21-222ENST00000433076 577 ntTSL 2 BASIC30.69■■■□□ 2.5
GRIN3BO60391 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
GRIN3BO60391 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
GRIN3BO60391 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
GRIN3BO60391 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.68■■■□□ 2.5
GRIN3BO60391 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC30.68■■■□□ 2.5
GRIN3BO60391 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC30.68■■■□□ 2.5
GRIN3BO60391 AC087393.1-201ENST00000582896 145 ntBASIC30.68■■■□□ 2.5
GRIN3BO60391 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.68■■■□□ 2.5
GRIN3BO60391 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
GRIN3BO60391 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC30.67■■■□□ 2.5
GRIN3BO60391 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
GRIN3BO60391 AC133561.4-201ENST00000566112 224 ntBASIC30.66■■■□□ 2.5
GRIN3BO60391 SRR-208ENST00000576848 588 ntTSL 4 BASIC30.66■■■□□ 2.5
GRIN3BO60391 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
GRIN3BO60391 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
GRIN3BO60391 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
GRIN3BO60391 GUK1-205ENST00000366722 850 ntTSL 3 BASIC30.65■■■□□ 2.5
GRIN3BO60391 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC30.64■■■□□ 2.5
GRIN3BO60391 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC30.64■■■□□ 2.5
GRIN3BO60391 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
GRIN3BO60391 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
GRIN3BO60391 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC30.63■■■□□ 2.49
GRIN3BO60391 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30.63■■■□□ 2.49
GRIN3BO60391 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
GRIN3BO60391 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
GRIN3BO60391 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
GRIN3BO60391 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
GRIN3BO60391 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC30.62■■■□□ 2.49
GRIN3BO60391 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
GRIN3BO60391 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
GRIN3BO60391 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC30.61■■■□□ 2.49
GRIN3BO60391 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC30.61■■■□□ 2.49
GRIN3BO60391 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC30.6■■■□□ 2.49
GRIN3BO60391 TSPY9P-201ENST00000440215 945 ntBASIC30.6■■■□□ 2.49
GRIN3BO60391 TSPY11P-201ENST00000442607 1045 ntBASIC30.6■■■□□ 2.49
GRIN3BO60391 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC30.6■■■□□ 2.49
GRIN3BO60391 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
GRIN3BO60391 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
GRIN3BO60391 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC30.59■■■□□ 2.49
GRIN3BO60391 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC30.59■■■□□ 2.49
GRIN3BO60391 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC30.59■■■□□ 2.49
GRIN3BO60391 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.58■■■□□ 2.49
GRIN3BO60391 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
GRIN3BO60391 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
GRIN3BO60391 EBPL-204ENST00000378272 766 ntTSL 3 BASIC30.58■■■□□ 2.49
GRIN3BO60391 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
GRIN3BO60391 AC096631.2-201ENST00000436136 790 ntBASIC30.58■■■□□ 2.49
GRIN3BO60391 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC30.58■■■□□ 2.49
GRIN3BO60391 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC30.58■■■□□ 2.49
GRIN3BO60391 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC30.58■■■□□ 2.49
GRIN3BO60391 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
GRIN3BO60391 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC30.57■■■□□ 2.48
GRIN3BO60391 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC30.56■■■□□ 2.48
GRIN3BO60391 AC026271.2-201ENST00000428091 497 ntBASIC30.56■■■□□ 2.48
GRIN3BO60391 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC30.56■■■□□ 2.48
GRIN3BO60391 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
GRIN3BO60391 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
GRIN3BO60391 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
GRIN3BO60391 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
GRIN3BO60391 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
GRIN3BO60391 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.54■■■□□ 2.48
GRIN3BO60391 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
GRIN3BO60391 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
GRIN3BO60391 ZNRF2P3-201ENST00000424200 374 ntBASIC30.53■■■□□ 2.48
GRIN3BO60391 MIR5787-201ENST00000611784 55 ntBASIC30.53■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms