Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.8■■□□□ 1.4
CHD8Q9HCK8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHD8Q9HCK8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHD8Q9HCK8 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHD8Q9HCK8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.8■■□□□ 1.4
CHD8Q9HCK8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHD8Q9HCK8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHD8Q9HCK8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHD8Q9HCK8 MIR4787-201ENST00000607364 84 ntBASIC23.79■■□□□ 1.4
CHD8Q9HCK8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD8Q9HCK8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD8Q9HCK8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD8Q9HCK8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD8Q9HCK8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD8Q9HCK8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD8Q9HCK8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHD8Q9HCK8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.78■■□□□ 1.4
CHD8Q9HCK8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.78■■□□□ 1.4
CHD8Q9HCK8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHD8Q9HCK8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.78■■□□□ 1.4
CHD8Q9HCK8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD8Q9HCK8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.77■■□□□ 1.4
CHD8Q9HCK8 UNC93B8-201ENST00000511903 705 ntBASIC23.77■■□□□ 1.4
CHD8Q9HCK8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD8Q9HCK8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD8Q9HCK8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD8Q9HCK8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.77■■□□□ 1.4
CHD8Q9HCK8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.77■■□□□ 1.39
CHD8Q9HCK8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.76■■□□□ 1.39
CHD8Q9HCK8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD8Q9HCK8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.76■■□□□ 1.39
CHD8Q9HCK8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHD8Q9HCK8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.75■■□□□ 1.39
CHD8Q9HCK8 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHD8Q9HCK8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.75■■□□□ 1.39
CHD8Q9HCK8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.74■■□□□ 1.39
CHD8Q9HCK8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHD8Q9HCK8 LONRF2P2-201ENST00000439212 571 ntBASIC23.73■■□□□ 1.39
CHD8Q9HCK8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CHD8Q9HCK8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHD8Q9HCK8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHD8Q9HCK8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHD8Q9HCK8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHD8Q9HCK8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.72■■□□□ 1.39
CHD8Q9HCK8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CHD8Q9HCK8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.72■■□□□ 1.39
CHD8Q9HCK8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CHD8Q9HCK8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.72■■□□□ 1.39
CHD8Q9HCK8 KRT16P3-201ENST00000439127 1283 ntBASIC23.71■■□□□ 1.39
CHD8Q9HCK8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.71■■□□□ 1.39
CHD8Q9HCK8 MIR5787-201ENST00000611784 55 ntBASIC23.71■■□□□ 1.39
CHD8Q9HCK8 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHD8Q9HCK8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CHD8Q9HCK8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHD8Q9HCK8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.7■■□□□ 1.38
CHD8Q9HCK8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.7■■□□□ 1.38
CHD8Q9HCK8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.7■■□□□ 1.38
CHD8Q9HCK8 AL359258.2-201ENST00000564063 1566 ntBASIC23.7■■□□□ 1.38
CHD8Q9HCK8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHD8Q9HCK8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHD8Q9HCK8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHD8Q9HCK8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.69■■□□□ 1.38
CHD8Q9HCK8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHD8Q9HCK8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHD8Q9HCK8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.69■■□□□ 1.38
CHD8Q9HCK8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.69■■□□□ 1.38
CHD8Q9HCK8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD8Q9HCK8 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.68■■□□□ 1.38
CHD8Q9HCK8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD8Q9HCK8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.68■■□□□ 1.38
CHD8Q9HCK8 AL161658.1-201ENST00000623641 1967 ntBASIC23.68■■□□□ 1.38
CHD8Q9HCK8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD8Q9HCK8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CHD8Q9HCK8 AC018755.3-202ENST00000596210 929 ntBASIC23.67■■□□□ 1.38
CHD8Q9HCK8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHD8Q9HCK8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
CHD8Q9HCK8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.66■■□□□ 1.38
CHD8Q9HCK8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.66■■□□□ 1.38
CHD8Q9HCK8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHD8Q9HCK8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CHD8Q9HCK8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHD8Q9HCK8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CHD8Q9HCK8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CHD8Q9HCK8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHD8Q9HCK8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHD8Q9HCK8 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CHD8Q9HCK8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHD8Q9HCK8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.65■■□□□ 1.38
CHD8Q9HCK8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.65■■□□□ 1.38
CHD8Q9HCK8 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CHD8Q9HCK8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHD8Q9HCK8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.64■■□□□ 1.37
CHD8Q9HCK8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.64■■□□□ 1.37
CHD8Q9HCK8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHD8Q9HCK8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHD8Q9HCK8 AC133561.4-201ENST00000566112 224 ntBASIC23.63■■□□□ 1.37
CHD8Q9HCK8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.63■■□□□ 1.37
CHD8Q9HCK8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.63■■□□□ 1.37
CHD8Q9HCK8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
CHD8Q9HCK8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms