Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 YOR012WYOR012W 414 nt6.86□□□□□ -1.31
RPH1P39956 FIT2YOR382W 462 nt6.86□□□□□ -1.31
RPH1P39956 EMP65YER140W 1671 nt6.86□□□□□ -1.31
RPH1P39956 APE4YHR113W 1473 nt6.85□□□□□ -1.31
RPH1P39956 GPD1YDL022W 1176 nt6.85□□□□□ -1.31
RPH1P39956 PPH21YDL134C 1110 nt6.85□□□□□ -1.31
RPH1P39956 SNF4YGL115W 969 nt6.85□□□□□ -1.31
RPH1P39956 LIA1YJR070C 978 nt6.85□□□□□ -1.31
RPH1P39956 RRN10YBL025W 438 nt6.85□□□□□ -1.31
RPH1P39956 FCY22YER060W-A 1593 nt6.85□□□□□ -1.31
RPH1P39956 CLN1YMR199W 1641 nt6.84□□□□□ -1.31
RPH1P39956 MRPL35YDR322W 1104 nt6.84□□□□□ -1.31
RPH1P39956 NTG2YOL043C 1143 nt6.84□□□□□ -1.31
RPH1P39956 THR1YHR025W 1074 nt6.83□□□□□ -1.32
RPH1P39956 SUN4YNL066W 1263 nt6.83□□□□□ -1.32
RPH1P39956 COX15YER141W 1461 nt6.83□□□□□ -1.32
RPH1P39956 PAC10YGR078C 600 nt6.82□□□□□ -1.32
RPH1P39956 SMK1YPR054W 1167 nt6.82□□□□□ -1.32
RPH1P39956 MRPL19YNL185C 477 nt6.81□□□□□ -1.32
RPH1P39956 YAL045CYAL045C 309 nt6.8□□□□□ -1.32
RPH1P39956 YLL056CYLL056C 897 nt6.8□□□□□ -1.32
RPH1P39956 PRP2YNR011C 2631 nt6.8□□□□□ -1.32
RPH1P39956 NUP57YGR119C 1626 nt6.79□□□□□ -1.32
RPH1P39956 HPT1YDR399W 666 nt6.79□□□□□ -1.32
RPH1P39956 YGL102CYGL102C 429 nt6.79□□□□□ -1.32
RPH1P39956 SRY1YKL218C 981 nt6.79□□□□□ -1.32
RPH1P39956 LOT6YLR011W 576 nt6.79□□□□□ -1.32
RPH1P39956 PHO85YPL031C 918 nt6.79□□□□□ -1.32
RPH1P39956 ASR1YPR093C 867 nt6.79□□□□□ -1.32
RPH1P39956 YPR127WYPR127W 1038 nt6.79□□□□□ -1.32
RPH1P39956 MHP1YJL042W 4197 nt6.79□□□□□ -1.32
RPH1P39956 SGE1YPR198W 1632 nt6.79□□□□□ -1.32
RPH1P39956 EXG2YDR261C 1689 nt6.78□□□□□ -1.32
RPH1P39956 CTA1YDR256C 1548 nt6.78□□□□□ -1.32
RPH1P39956 AIM2YAL049C 741 nt6.78□□□□□ -1.32
RPH1P39956 FMP40YPL222W 2067 nt6.77□□□□□ -1.33
RPH1P39956 PTC7YHR076W 1032 nt6.76□□□□□ -1.33
RPH1P39956 ADE17YMR120C 1779 nt6.76□□□□□ -1.33
RPH1P39956 FCY2YER056C 1602 nt6.76□□□□□ -1.33
RPH1P39956 DLD1YDL174C 1764 nt6.75□□□□□ -1.33
RPH1P39956 ICP55YER078C 1536 nt6.75□□□□□ -1.33
RPH1P39956 NUP49YGL172W 1419 nt6.75□□□□□ -1.33
RPH1P39956 YIP4YGL198W 708 nt6.74□□□□□ -1.33
RPH1P39956 REC107YJR021C 945 nt6.74□□□□□ -1.33
RPH1P39956 SMX3YPR182W 261 nt6.74□□□□□ -1.33
RPH1P39956 YLL058WYLL058W 1728 nt6.73□□□□□ -1.33
RPH1P39956 MIX17YMR002W 471 nt6.73□□□□□ -1.33
RPH1P39956 IRC5YFR038W 2562 nt6.73□□□□□ -1.33
RPH1P39956 YHR131CYHR131C 2553 nt6.73□□□□□ -1.33
RPH1P39956 YCR041WYCR041W 333 nt6.72□□□□□ -1.33
RPH1P39956 FPR2YDR519W 408 nt6.72□□□□□ -1.33
RPH1P39956 LCL3YGL085W 825 nt6.72□□□□□ -1.33
RPH1P39956 RPL2BYIL018W 765 nt6.72□□□□□ -1.33
RPH1P39956 PRI1YIR008C 1230 nt6.72□□□□□ -1.33
RPH1P39956 MSC3YLR219W 2187 nt6.72□□□□□ -1.33
RPH1P39956 GLN3YER040W 2193 nt6.71□□□□□ -1.33
RPH1P39956 NMD5YJR132W 3147 nt6.71□□□□□ -1.34
RPH1P39956 VBA5YKR105C 1749 nt6.71□□□□□ -1.34
RPH1P39956 NUP84YDL116W 2181 nt6.7□□□□□ -1.34
RPH1P39956 GTT3YEL017W 1014 nt6.7□□□□□ -1.34
RPH1P39956 AIM20YIL158W 615 nt6.7□□□□□ -1.34
RPH1P39956 NOG2YNR053C 1461 nt6.7□□□□□ -1.34
RPH1P39956 DAL7YIR031C 1665 nt6.7□□□□□ -1.34
RPH1P39956 CRH1YGR189C 1524 nt6.7□□□□□ -1.34
RPH1P39956 IMG1YCR046C 510 nt6.69□□□□□ -1.34
RPH1P39956 NTG1YAL015C 1200 nt6.69□□□□□ -1.34
RPH1P39956 TAF9YMR236W 474 nt6.69□□□□□ -1.34
RPH1P39956 YLL066CYLL066C 3618 nt6.69□□□□□ -1.34
RPH1P39956 TDP1YBR223C 1635 nt6.68□□□□□ -1.34
RPH1P39956 MSG5YNL053W 1470 nt6.68□□□□□ -1.34
RPH1P39956 SAL1YNL083W 1485 nt6.68□□□□□ -1.34
RPH1P39956 ECM38YLR299W 1983 nt6.68□□□□□ -1.34
RPH1P39956 MRPS28YDR337W 861 nt6.68□□□□□ -1.34
RPH1P39956 YIL029W-AYIL029W-A 372 nt6.68□□□□□ -1.34
RPH1P39956 CSM2YIL132C 642 nt6.68□□□□□ -1.34
RPH1P39956 ASF1YJL115W 840 nt6.68□□□□□ -1.34
RPH1P39956 HMS2YJR147W 1077 nt6.68□□□□□ -1.34
RPH1P39956 RPL31BYLR406C 342 nt6.68□□□□□ -1.34
RPH1P39956 ASN2YGR124W 1719 nt6.67□□□□□ -1.34
RPH1P39956 YLR112WYLR112W 420 nt6.67□□□□□ -1.34
RPH1P39956 SPG5YMR191W 1122 nt6.67□□□□□ -1.34
RPH1P39956 MRPS18YNL306W 654 nt6.67□□□□□ -1.34
RPH1P39956 LSC1YOR142W 990 nt6.67□□□□□ -1.34
RPH1P39956 YPL136WYPL136W 369 nt6.67□□□□□ -1.34
RPH1P39956 ILV6YCL009C 930 nt6.67□□□□□ -1.34
RPH1P39956 CYB2YML054C 1776 nt6.67□□□□□ -1.34
RPH1P39956 YKL018C-AYKL018C-A 300 nt6.66□□□□□ -1.34
RPH1P39956 YOS9YDR057W 1629 nt6.65□□□□□ -1.34
RPH1P39956 PAB1YER165W 1734 nt6.65□□□□□ -1.34
RPH1P39956 HED1YDR014W-A 489 nt6.65□□□□□ -1.34
RPH1P39956 FMO1YHR176W 1299 nt6.65□□□□□ -1.34
RPH1P39956 CTF8YHR191C 402 nt6.65□□□□□ -1.34
RPH1P39956 TPK1YJL164C 1194 nt6.65□□□□□ -1.34
RPH1P39956 YMR034CYMR034C 1305 nt6.65□□□□□ -1.35
RPH1P39956 PMP3YDR276C 168 nt6.64□□□□□ -1.35
RPH1P39956 OPI7YDR360W 435 nt6.64□□□□□ -1.35
RPH1P39956 POR2YIL114C 846 nt6.64□□□□□ -1.35
RPH1P39956 SWD1YAR003W 1281 nt6.64□□□□□ -1.35
RPH1P39956 SEC62YPL094C 825 nt6.64□□□□□ -1.35
RPH1P39956 MGM101YJR144W 810 nt6.63□□□□□ -1.35
Retrieved 100 of 7,029 protein–RNA pairs in 31.6 ms