Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPDEFO95238 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.74■□□□□ 0.91
SPDEFO95238 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPDEFO95238 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SPDEFO95238 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.74■□□□□ 0.91
SPDEFO95238 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.73■□□□□ 0.91
SPDEFO95238 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPDEFO95238 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.73■□□□□ 0.91
SPDEFO95238 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SPDEFO95238 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SPDEFO95238 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPDEFO95238 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPDEFO95238 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SPDEFO95238 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPDEFO95238 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.71■□□□□ 0.91
SPDEFO95238 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SPDEFO95238 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPDEFO95238 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SPDEFO95238 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPDEFO95238 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SPDEFO95238 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPDEFO95238 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPDEFO95238 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDEFO95238 AL162393.1-201ENST00000437852 946 ntBASIC20.7■□□□□ 0.9
SPDEFO95238 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDEFO95238 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.7■□□□□ 0.9
SPDEFO95238 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDEFO95238 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SPDEFO95238 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDEFO95238 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDEFO95238 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SPDEFO95238 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDEFO95238 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPDEFO95238 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPDEFO95238 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.68■□□□□ 0.9
SPDEFO95238 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
SPDEFO95238 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.68■□□□□ 0.9
SPDEFO95238 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.67■□□□□ 0.9
SPDEFO95238 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPDEFO95238 AC087741.3-201ENST00000624270 1347 ntBASIC20.67■□□□□ 0.9
SPDEFO95238 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.67■□□□□ 0.9
SPDEFO95238 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPDEFO95238 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPDEFO95238 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPDEFO95238 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPDEFO95238 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPDEFO95238 AC133561.1-201ENST00000568600 2415 ntBASIC20.66■□□□□ 0.9
SPDEFO95238 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPDEFO95238 AC044849.2-201ENST00000606596 710 ntBASIC20.66■□□□□ 0.9
SPDEFO95238 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPDEFO95238 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.66■□□□□ 0.9
SPDEFO95238 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.65■□□□□ 0.9
SPDEFO95238 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPDEFO95238 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.65■□□□□ 0.9
SPDEFO95238 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPDEFO95238 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPDEFO95238 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SPDEFO95238 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SPDEFO95238 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPDEFO95238 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SPDEFO95238 MIR6090-201ENST00000622481 60 ntBASIC20.64■□□□□ 0.89
SPDEFO95238 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.64■□□□□ 0.89
SPDEFO95238 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
SPDEFO95238 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPDEFO95238 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPDEFO95238 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SPDEFO95238 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPDEFO95238 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPDEFO95238 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPDEFO95238 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
SPDEFO95238 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.62■□□□□ 0.89
SPDEFO95238 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SPDEFO95238 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPDEFO95238 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPDEFO95238 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPDEFO95238 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SPDEFO95238 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SPDEFO95238 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPDEFO95238 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPDEFO95238 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPDEFO95238 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.61■□□□□ 0.89
SPDEFO95238 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.61■□□□□ 0.89
SPDEFO95238 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
SPDEFO95238 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SPDEFO95238 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
SPDEFO95238 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPDEFO95238 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SPDEFO95238 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPDEFO95238 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPDEFO95238 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPDEFO95238 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SPDEFO95238 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SPDEFO95238 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.59■□□□□ 0.89
SPDEFO95238 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPDEFO95238 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.59■□□□□ 0.89
SPDEFO95238 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPDEFO95238 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SPDEFO95238 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPDEFO95238 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.58■□□□□ 0.89
SPDEFO95238 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms