Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 AP003733.1-201ENST00000491725 852 ntBASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 Z83836.1-201ENST00000624605 1642 ntBASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SNAP47Q5SQN1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 CHCHD2P8-201ENST00000429873 447 ntBASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 AP002383.4-201ENST00000442518 975 ntBASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SNAP47Q5SQN1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SNAP47Q5SQN1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SNAP47Q5SQN1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SNAP47Q5SQN1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SNAP47Q5SQN1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
SNAP47Q5SQN1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SNAP47Q5SQN1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.77■□□□□ 0.43
SNAP47Q5SQN1 HEIH-201ENST00000623091 1652 ntBASIC17.77■□□□□ 0.43
SNAP47Q5SQN1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SNAP47Q5SQN1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.43
SNAP47Q5SQN1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.77■□□□□ 0.43
SNAP47Q5SQN1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNAP47Q5SQN1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNAP47Q5SQN1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 AL691432.3-201ENST00000621860 400 ntBASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAP47Q5SQN1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms