Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF546Q86UE3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.61■□□□□ 0.89
ZNF546Q86UE3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF546Q86UE3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF546Q86UE3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ZNF546Q86UE3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ZNF546Q86UE3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF546Q86UE3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ZNF546Q86UE3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF546Q86UE3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF546Q86UE3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF546Q86UE3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.59■□□□□ 0.89
ZNF546Q86UE3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF546Q86UE3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF546Q86UE3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF546Q86UE3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF546Q86UE3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
ZNF546Q86UE3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ZNF546Q86UE3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ZNF546Q86UE3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
ZNF546Q86UE3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF546Q86UE3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF546Q86UE3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF546Q86UE3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF546Q86UE3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF546Q86UE3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF546Q86UE3 AC133561.1-201ENST00000568600 2415 ntBASIC20.56■□□□□ 0.88
ZNF546Q86UE3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ZNF546Q86UE3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF546Q86UE3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF546Q86UE3 AC100797.4-201ENST00000631653 1827 ntBASIC20.55■□□□□ 0.88
ZNF546Q86UE3 ERN1-208ENST00000606895 2068 ntBASIC20.55■□□□□ 0.88
ZNF546Q86UE3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF546Q86UE3 WASH5P-204ENST00000632292 975 ntBASIC20.55■□□□□ 0.88
ZNF546Q86UE3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF546Q86UE3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF546Q86UE3 AP002365.1-201ENST00000603448 772 ntBASIC20.54■□□□□ 0.88
ZNF546Q86UE3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF546Q86UE3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF546Q86UE3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF546Q86UE3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF546Q86UE3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.53■□□□□ 0.88
ZNF546Q86UE3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
ZNF546Q86UE3 AP002414.2-202ENST00000590929 1450 ntBASIC20.53■□□□□ 0.88
ZNF546Q86UE3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF546Q86UE3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF546Q86UE3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF546Q86UE3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ZNF546Q86UE3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ZNF546Q86UE3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF546Q86UE3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF546Q86UE3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ZNF546Q86UE3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF546Q86UE3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF546Q86UE3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZNF546Q86UE3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZNF546Q86UE3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZNF546Q86UE3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ZNF546Q86UE3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.51■□□□□ 0.87
ZNF546Q86UE3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
ZNF546Q86UE3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF546Q86UE3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.51■□□□□ 0.87
ZNF546Q86UE3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ZNF546Q86UE3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.51■□□□□ 0.87
ZNF546Q86UE3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF546Q86UE3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.51■□□□□ 0.87
ZNF546Q86UE3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF546Q86UE3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF546Q86UE3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.5■□□□□ 0.87
ZNF546Q86UE3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ZNF546Q86UE3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF546Q86UE3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF546Q86UE3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF546Q86UE3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.49■□□□□ 0.87
ZNF546Q86UE3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF546Q86UE3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF546Q86UE3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ZNF546Q86UE3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF546Q86UE3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF546Q86UE3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF546Q86UE3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF546Q86UE3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.47■□□□□ 0.87
ZNF546Q86UE3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF546Q86UE3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.47■□□□□ 0.87
ZNF546Q86UE3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF546Q86UE3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF546Q86UE3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ZNF546Q86UE3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF546Q86UE3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
ZNF546Q86UE3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ZNF546Q86UE3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF546Q86UE3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.45■□□□□ 0.86
ZNF546Q86UE3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.45■□□□□ 0.86
ZNF546Q86UE3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.45■□□□□ 0.86
ZNF546Q86UE3 AC012676.1-201ENST00000574705 1949 ntBASIC20.45■□□□□ 0.86
ZNF546Q86UE3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ZNF546Q86UE3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF546Q86UE3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.44■□□□□ 0.86
ZNF546Q86UE3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF546Q86UE3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms