Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 PMT1YDL095W 2454 nt10.95□□□□□ -0.66
RKR1Q04781 RDR1YOR380W 1641 nt10.95□□□□□ -0.66
RKR1Q04781 HNM1YGL077C 1692 nt10.95□□□□□ -0.66
RKR1Q04781 YNL092WYNL092W 1203 nt10.94□□□□□ -0.66
RKR1Q04781 NUP49YGL172W 1419 nt10.94□□□□□ -0.66
RKR1Q04781 AFG3YER017C 2286 nt10.93□□□□□ -0.66
RKR1Q04781 TFG2YGR005C 1203 nt10.93□□□□□ -0.66
RKR1Q04781 CDC1YDR182W 1476 nt10.92□□□□□ -0.66
RKR1Q04781 YKR045CYKR045C 552 nt10.92□□□□□ -0.66
RKR1Q04781 YCR049CYCR049C 447 nt10.91□□□□□ -0.66
RKR1Q04781 LIP5YOR196C 1245 nt10.9□□□□□ -0.66
RKR1Q04781 YBR113WYBR113W 483 nt10.9□□□□□ -0.66
RKR1Q04781 RNH201YNL072W 924 nt10.9□□□□□ -0.67
RKR1Q04781 YOL099CYOL099C 492 nt10.9□□□□□ -0.67
RKR1Q04781 PGI1YBR196C 1665 nt10.89□□□□□ -0.67
RKR1Q04781 MSC3YLR219W 2187 nt10.89□□□□□ -0.67
RKR1Q04781 TPI1YDR050C 747 nt10.88□□□□□ -0.67
RKR1Q04781 DIA4YHR011W 1341 nt10.87□□□□□ -0.67
RKR1Q04781 YDR187CYDR187C 519 nt10.86□□□□□ -0.67
RKR1Q04781 GCG1YER163C 699 nt10.86□□□□□ -0.67
RKR1Q04781 YMR295CYMR295C 594 nt10.86□□□□□ -0.67
RKR1Q04781 RPS28AYOR167C 204 nt10.85□□□□□ -0.67
RKR1Q04781 RAD59YDL059C 717 nt10.84□□□□□ -0.67
RKR1Q04781 FMO1YHR176W 1299 nt10.82□□□□□ -0.68
RKR1Q04781 TSR2YLR435W 618 nt10.82□□□□□ -0.68
RKR1Q04781 YLL056CYLL056C 897 nt10.82□□□□□ -0.68
RKR1Q04781 ERG27YLR100W 1044 nt10.82□□□□□ -0.68
RKR1Q04781 YMR122CYMR122C 375 nt10.82□□□□□ -0.68
RKR1Q04781 YPL102CYPL102C 303 nt10.82□□□□□ -0.68
RKR1Q04781 UIP4YPL186C 915 nt10.82□□□□□ -0.68
RKR1Q04781 RPL43AYPR043W 279 nt10.82□□□□□ -0.68
RKR1Q04781 HEL2YDR266C 1920 nt10.81□□□□□ -0.68
RKR1Q04781 CDC7YDL017W 1524 nt10.81□□□□□ -0.68
RKR1Q04781 TDH2YJR009C 999 nt10.79□□□□□ -0.68
RKR1Q04781 HBS1YKR084C 1836 nt10.79□□□□□ -0.68
RKR1Q04781 ICP55YER078C 1536 nt10.78□□□□□ -0.68
RKR1Q04781 HPT1YDR399W 666 nt10.77□□□□□ -0.68
RKR1Q04781 RTC2YBR147W 891 nt10.77□□□□□ -0.68
RKR1Q04781 YGL102CYGL102C 429 nt10.77□□□□□ -0.69
RKR1Q04781 MAM3YOL060C 2121 nt10.76□□□□□ -0.69
RKR1Q04781 GTS1YGL181W 1191 nt10.76□□□□□ -0.69
RKR1Q04781 REC107YJR021C 945 nt10.74□□□□□ -0.69
RKR1Q04781 SMX3YPR182W 261 nt10.74□□□□□ -0.69
RKR1Q04781 ERR1YOR393W 1314 nt10.74□□□□□ -0.69
RKR1Q04781 ERR2YPL281C 1314 nt10.74□□□□□ -0.69
RKR1Q04781 SNF7YLR025W 723 nt10.73□□□□□ -0.69
RKR1Q04781 BEM1YBR200W 1656 nt10.73□□□□□ -0.69
RKR1Q04781 YBL113CYBL113C 2379 nt10.73□□□□□ -0.69
RKR1Q04781 YDR327WYDR327W 327 nt10.73□□□□□ -0.69
RKR1Q04781 TAE1YBR261C 699 nt10.73□□□□□ -0.69
RKR1Q04781 MSS51YLR203C 1311 nt10.72□□□□□ -0.69
RKR1Q04781 YAL045CYAL045C 309 nt10.72□□□□□ -0.69
RKR1Q04781 PRI1YIR008C 1230 nt10.7□□□□□ -0.7
RKR1Q04781 DUR3YHL016C 2208 nt10.7□□□□□ -0.7
RKR1Q04781 MAE1YKL029C 2010 nt10.7□□□□□ -0.7
RKR1Q04781 RUP1YOR138C 2016 nt10.7□□□□□ -0.7
RKR1Q04781 GPA2YER020W 1350 nt10.7□□□□□ -0.7
RKR1Q04781 HMG2YLR450W 3138 nt10.69□□□□□ -0.7
RKR1Q04781 HED1YDR014W-A 489 nt10.69□□□□□ -0.7
RKR1Q04781 YNL097W-AYNL097W-A 156 nt10.69□□□□□ -0.7
RKR1Q04781 YGL260WYGL260W 231 nt10.69□□□□□ -0.7
RKR1Q04781 SPG5YMR191W 1122 nt10.69□□□□□ -0.7
RKR1Q04781 THR1YHR025W 1074 nt10.68□□□□□ -0.7
RKR1Q04781 PTC7YHR076W 1032 nt10.68□□□□□ -0.7
RKR1Q04781 CUE4YML101C 354 nt10.68□□□□□ -0.7
RKR1Q04781 PEX3YDR329C 1326 nt10.67□□□□□ -0.7
RKR1Q04781 OM45YIL136W 1182 nt10.67□□□□□ -0.7
RKR1Q04781 LYS21YDL131W 1323 nt10.66□□□□□ -0.7
RKR1Q04781 EMP65YER140W 1671 nt10.66□□□□□ -0.7
RKR1Q04781 YKL018C-AYKL018C-A 300 nt10.65□□□□□ -0.7
RKR1Q04781 CTA1YDR256C 1548 nt10.65□□□□□ -0.7
RKR1Q04781 VMA3YEL027W 483 nt10.65□□□□□ -0.71
RKR1Q04781 YHL018WYHL018W 363 nt10.65□□□□□ -0.71
RKR1Q04781 TIF2YJL138C 1188 nt10.65□□□□□ -0.71
RKR1Q04781 TIF1YKR059W 1188 nt10.65□□□□□ -0.71
RKR1Q04781 SEN34YAR008W 828 nt10.65□□□□□ -0.71
RKR1Q04781 MHT1YLL062C 975 nt10.63□□□□□ -0.71
RKR1Q04781 DUS3YLR401C 2007 nt10.62□□□□□ -0.71
RKR1Q04781 YKL077WYKL077W 1179 nt10.62□□□□□ -0.71
RKR1Q04781 YLR157W-EYLR157W-E 165 nt10.62□□□□□ -0.71
RKR1Q04781 SEC62YPL094C 825 nt10.62□□□□□ -0.71
RKR1Q04781 RSC9YML127W 1746 nt10.62□□□□□ -0.71
RKR1Q04781 TCB1YOR086C 3561 nt10.62□□□□□ -0.71
RKR1Q04781 RPL31BYLR406C 342 nt10.61□□□□□ -0.71
RKR1Q04781 ELA1YNL230C 1140 nt10.61□□□□□ -0.71
RKR1Q04781 YBR027CYBR027C 333 nt10.61□□□□□ -0.71
RKR1Q04781 ZWF1YNL241C 1518 nt10.61□□□□□ -0.71
RKR1Q04781 ERG8YMR220W 1356 nt10.61□□□□□ -0.71
RKR1Q04781 CSL4YNL232W 879 nt10.6□□□□□ -0.71
RKR1Q04781 SGF73YGL066W 1974 nt10.59□□□□□ -0.71
RKR1Q04781 MSP1YGR028W 1089 nt10.59□□□□□ -0.71
RKR1Q04781 MRPL23YOR150W 492 nt10.59□□□□□ -0.71
RKR1Q04781 RNH1YMR234W 1047 nt10.58□□□□□ -0.72
RKR1Q04781 YOR072WYOR072W 315 nt10.57□□□□□ -0.72
RKR1Q04781 PFS2YNL317W 1398 nt10.57□□□□□ -0.72
RKR1Q04781 CUP2YGL166W 678 nt10.56□□□□□ -0.72
RKR1Q04781 MOG1YJR074W 657 nt10.56□□□□□ -0.72
RKR1Q04781 IVY1YDR229W 1362 nt10.56□□□□□ -0.72
RKR1Q04781 VBA5YKR105C 1749 nt10.56□□□□□ -0.72
RKR1Q04781 NAS6YGR232W 687 nt10.56□□□□□ -0.72
Retrieved 100 of 7,029 protein–RNA pairs in 101.9 ms