Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 SEC24YIL109C 2781 nt6.06□□□□□ -1.44
SSU72P53538 YAH1YPL252C 519 nt6.06□□□□□ -1.44
SSU72P53538 BRN1YBL097W 2265 nt6.06□□□□□ -1.44
SSU72P53538 PSP2YML017W 1782 nt6.06□□□□□ -1.44
SSU72P53538 ERG24YNL280C 1317 nt6.05□□□□□ -1.44
SSU72P53538 SPR1YOR190W 1338 nt6.05□□□□□ -1.44
SSU72P53538 DAL80YKR034W 810 nt6.05□□□□□ -1.44
SSU72P53538 YML034C-AYML034C-A 399 nt6.05□□□□□ -1.44
SSU72P53538 CPT1YNL130C 1182 nt6.05□□□□□ -1.44
SSU72P53538 HXK2YGL253W 1461 nt6.04□□□□□ -1.44
SSU72P53538 TAD2YJL035C 753 nt6.04□□□□□ -1.44
SSU72P53538 YPT10YBR264C 600 nt6.04□□□□□ -1.44
SSU72P53538 YNL295WYNL295W 1575 nt6.04□□□□□ -1.44
SSU72P53538 GDH1YOR375C 1365 nt6.04□□□□□ -1.44
SSU72P53538 RRP43YCR035C 1185 nt6.03□□□□□ -1.44
SSU72P53538 SNA3YJL151C 402 nt6.03□□□□□ -1.44
SSU72P53538 CCP1YKR066C 1086 nt6.03□□□□□ -1.44
SSU72P53538 VPS65YLR322W 315 nt6.03□□□□□ -1.44
SSU72P53538 ERV25YML012W 636 nt6.03□□□□□ -1.44
SSU72P53538 YBL113CYBL113C 2379 nt6.03□□□□□ -1.44
SSU72P53538 TCB1YOR086C 3561 nt6.03□□□□□ -1.44
SSU72P53538 FPR2YDR519W 408 nt6.02□□□□□ -1.45
SSU72P53538 OPI1YHL020C 1215 nt6.02□□□□□ -1.45
SSU72P53538 STS1YIR011C 960 nt6.02□□□□□ -1.45
SSU72P53538 CDC23YHR166C 1881 nt6.02□□□□□ -1.45
SSU72P53538 PNS1YOR161C 1620 nt6.02□□□□□ -1.45
SSU72P53538 ELP4YPL101W 1371 nt6.02□□□□□ -1.45
SSU72P53538 MRP1YDR347W 966 nt6.01□□□□□ -1.45
SSU72P53538 YJL043WYJL043W 774 nt6.01□□□□□ -1.45
SSU72P53538 PRY2YKR013W 990 nt6.01□□□□□ -1.45
SSU72P53538 HNM1YGL077C 1692 nt6.01□□□□□ -1.45
SSU72P53538 CAN1YEL063C 1773 nt6.01□□□□□ -1.45
SSU72P53538 MSS51YLR203C 1311 nt6□□□□□ -1.45
SSU72P53538 YGR127WYGR127W 939 nt6□□□□□ -1.45
SSU72P53538 SOD2YHR008C 702 nt6□□□□□ -1.45
SSU72P53538 RIB1YBL033C 1038 nt6□□□□□ -1.45
SSU72P53538 DSC3YOR223W 879 nt6□□□□□ -1.45
SSU72P53538 POP1YNL221C 2628 nt6□□□□□ -1.45
SSU72P53538 NUP53YMR153W 1428 nt5.99□□□□□ -1.45
SSU72P53538 PSA1YDL055C 1086 nt5.99□□□□□ -1.45
SSU72P53538 MSS1YMR023C 1581 nt5.98□□□□□ -1.45
SSU72P53538 YBR284WYBR284W 2394 nt5.98□□□□□ -1.45
SSU72P53538 YDR476CYDR476C 675 nt5.98□□□□□ -1.45
SSU72P53538 GRH1YDR517W 1119 nt5.98□□□□□ -1.45
SSU72P53538 HRA1HRA1 564 nt5.98□□□□□ -1.45
SSU72P53538 IRS4YKR019C 1848 nt5.97□□□□□ -1.45
SSU72P53538 KIN1YDR122W 3195 nt5.97□□□□□ -1.45
SSU72P53538 SHO1YER118C 1104 nt5.97□□□□□ -1.45
SSU72P53538 HAC1YFL031W 717 nt5.97□□□□□ -1.45
SSU72P53538 THI4YGR144W 981 nt5.97□□□□□ -1.45
SSU72P53538 ERV2YPR037C 591 nt5.97□□□□□ -1.45
SSU72P53538 PAB1YER165W 1734 nt5.96□□□□□ -1.45
SSU72P53538 YNL200CYNL200C 741 nt5.96□□□□□ -1.46
SSU72P53538 DUG1YFR044C 1446 nt5.96□□□□□ -1.46
SSU72P53538 SPS1YDR523C 1473 nt5.96□□□□□ -1.46
SSU72P53538 BDS1YOL164W 1941 nt5.95□□□□□ -1.46
SSU72P53538 OSM1YJR051W 1506 nt5.95□□□□□ -1.46
SSU72P53538 YKL147CYKL147C 618 nt5.95□□□□□ -1.46
SSU72P53538 SEC23YPR181C 2307 nt5.95□□□□□ -1.46
SSU72P53538 RIX7YLL034C 2514 nt5.95□□□□□ -1.46
SSU72P53538 CYC8YBR112C 2901 nt5.95□□□□□ -1.46
SSU72P53538 AFG3YER017C 2286 nt5.94□□□□□ -1.46
SSU72P53538 SMK1YPR054W 1167 nt5.94□□□□□ -1.46
SSU72P53538 YBR226CYBR226C 411 nt5.94□□□□□ -1.46
SSU72P53538 PCS60YBR222C 1632 nt5.94□□□□□ -1.46
SSU72P53538 CIT3YPR001W 1461 nt5.94□□□□□ -1.46
SSU72P53538 YIL055CYIL055C 1884 nt5.94□□□□□ -1.46
SSU72P53538 RMD8YFR048W 1989 nt5.93□□□□□ -1.46
SSU72P53538 YGL260WYGL260W 231 nt5.93□□□□□ -1.46
SSU72P53538 PAC10YGR078C 600 nt5.93□□□□□ -1.46
SSU72P53538 YIL077CYIL077C 963 nt5.93□□□□□ -1.46
SSU72P53538 ADE1YAR015W 921 nt5.93□□□□□ -1.46
SSU72P53538 IMA2YOL157C 1770 nt5.93□□□□□ -1.46
SSU72P53538 POX1YGL205W 2247 nt5.93□□□□□ -1.46
SSU72P53538 YEL020CYEL020C 1683 nt5.92□□□□□ -1.46
SSU72P53538 LIP5YOR196C 1245 nt5.92□□□□□ -1.46
SSU72P53538 EFM1YHL039W 1758 nt5.92□□□□□ -1.46
SSU72P53538 FCY22YER060W-A 1593 nt5.92□□□□□ -1.46
SSU72P53538 FLC2YAL053W 2352 nt5.92□□□□□ -1.46
SSU72P53538 MHP1YJL042W 4197 nt5.91□□□□□ -1.46
SSU72P53538 SUB2YDL084W 1341 nt5.91□□□□□ -1.46
SSU72P53538 CIT2YCR005C 1383 nt5.91□□□□□ -1.46
SSU72P53538 MSN2YMR037C 2115 nt5.9□□□□□ -1.46
SSU72P53538 GLN3YER040W 2193 nt5.9□□□□□ -1.46
SSU72P53538 SKP1YDR328C 585 nt5.9□□□□□ -1.46
SSU72P53538 YJL213WYJL213W 996 nt5.9□□□□□ -1.46
SSU72P53538 YJR142WYJR142W 1029 nt5.9□□□□□ -1.46
SSU72P53538 HRB1YNL004W 1365 nt5.9□□□□□ -1.47
SSU72P53538 CEF1YMR213W 1773 nt5.9□□□□□ -1.47
SSU72P53538 YCR041WYCR041W 333 nt5.89□□□□□ -1.47
SSU72P53538 YGL081WYGL081W 963 nt5.89□□□□□ -1.47
SSU72P53538 PIL1YGR086C 1020 nt5.89□□□□□ -1.47
SSU72P53538 MSI1YBR195C 1269 nt5.89□□□□□ -1.47
SSU72P53538 LDB19YOR322C 2457 nt5.89□□□□□ -1.47
SSU72P53538 snR82snR82 268 nt5.88□□□□□ -1.47
SSU72P53538 SUF3tG(CCC)D 72 nt5.88□□□□□ -1.47
SSU72P53538 HHY1YEL059W 309 nt5.88□□□□□ -1.47
SSU72P53538 CDC11YJR076C 1248 nt5.88□□□□□ -1.47
SSU72P53538 GAA1YLR088W 1845 nt5.88□□□□□ -1.47
SSU72P53538 AIM2YAL049C 741 nt5.87□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 46.3 ms