Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 CDC23YHR166C 1881 nt6.84□□□□□ -1.31
TY2A-LR1P0C2J4 PRC1YMR297W 1599 nt6.84□□□□□ -1.31
TY2A-LR1P0C2J4 GGC1YDL198C 903 nt6.84□□□□□ -1.31
TY2A-LR1P0C2J4 ATP10YLR393W 840 nt6.84□□□□□ -1.31
TY2A-LR1P0C2J4 LIP5YOR196C 1245 nt6.84□□□□□ -1.31
TY2A-LR1P0C2J4 SDH8YBR269C 417 nt6.84□□□□□ -1.31
TY2A-LR1P0C2J4 ITR1YDR497C 1755 nt6.84□□□□□ -1.31
TY2A-LR1P0C2J4 CIT2YCR005C 1383 nt6.83□□□□□ -1.32
TY2A-LR1P0C2J4 PET117YER058W 324 nt6.83□□□□□ -1.32
TY2A-LR1P0C2J4 YGL260WYGL260W 231 nt6.83□□□□□ -1.32
TY2A-LR1P0C2J4 PUP2YGR253C 783 nt6.83□□□□□ -1.32
TY2A-LR1P0C2J4 YKL147CYKL147C 618 nt6.83□□□□□ -1.32
TY2A-LR1P0C2J4 BEM1YBR200W 1656 nt6.83□□□□□ -1.32
TY2A-LR1P0C2J4 MFG1YDL233W 1377 nt6.82□□□□□ -1.32
TY2A-LR1P0C2J4 UME1YPL139C 1383 nt6.82□□□□□ -1.32
TY2A-LR1P0C2J4 MAM3YOL060C 2121 nt6.82□□□□□ -1.32
TY2A-LR1P0C2J4 SUF3tG(CCC)D 72 nt6.82□□□□□ -1.32
TY2A-LR1P0C2J4 TRR2YHR106W 1029 nt6.82□□□□□ -1.32
TY2A-LR1P0C2J4 YAL019W-AYAL019W-A 570 nt6.82□□□□□ -1.32
TY2A-LR1P0C2J4 ARA2YMR041C 1008 nt6.82□□□□□ -1.32
TY2A-LR1P0C2J4 PTH2YBL057C 627 nt6.82□□□□□ -1.32
TY2A-LR1P0C2J4 YBR226CYBR226C 411 nt6.82□□□□□ -1.32
TY2A-LR1P0C2J4 BIM1YER016W 1035 nt6.81□□□□□ -1.32
TY2A-LR1P0C2J4 YPL067CYPL067C 597 nt6.81□□□□□ -1.32
TY2A-LR1P0C2J4 DML1YMR211W 1428 nt6.81□□□□□ -1.32
TY2A-LR1P0C2J4 NPL6YMR091C 1308 nt6.8□□□□□ -1.32
TY2A-LR1P0C2J4 YPQ2YDR352W 954 nt6.8□□□□□ -1.32
TY2A-LR1P0C2J4 PRS4YBL068W 981 nt6.8□□□□□ -1.32
TY2A-LR1P0C2J4 FRT1YOR324C 1809 nt6.8□□□□□ -1.32
TY2A-LR1P0C2J4 RDR1YOR380W 1641 nt6.79□□□□□ -1.32
TY2A-LR1P0C2J4 TOP3YLR234W 1971 nt6.79□□□□□ -1.32
TY2A-LR1P0C2J4 YMR074CYMR074C 438 nt6.79□□□□□ -1.32
TY2A-LR1P0C2J4 RPR1RPR1 369 nt6.79□□□□□ -1.32
TY2A-LR1P0C2J4 YPQ1YOL092W 927 nt6.79□□□□□ -1.32
TY2A-LR1P0C2J4 PZF1YPR186C 1290 nt6.79□□□□□ -1.32
TY2A-LR1P0C2J4 TUB1YML085C 1344 nt6.78□□□□□ -1.32
TY2A-LR1P0C2J4 YNL017CYNL017C 339 nt6.78□□□□□ -1.32
TY2A-LR1P0C2J4 CST26YBR042C 1194 nt6.78□□□□□ -1.32
TY2A-LR1P0C2J4 NFS1YCL017C 1494 nt6.78□□□□□ -1.32
TY2A-LR1P0C2J4 GFA1YKL104C 2154 nt6.78□□□□□ -1.32
TY2A-LR1P0C2J4 CAN1YEL063C 1773 nt6.77□□□□□ -1.33
TY2A-LR1P0C2J4 CDC7YDL017W 1524 nt6.77□□□□□ -1.33
TY2A-LR1P0C2J4 CYS3YAL012W 1185 nt6.77□□□□□ -1.33
TY2A-LR1P0C2J4 DPM1YPR183W 804 nt6.77□□□□□ -1.33
TY2A-LR1P0C2J4 GCD11YER025W 1584 nt6.77□□□□□ -1.33
TY2A-LR1P0C2J4 BUD9YGR041W 1644 nt6.76□□□□□ -1.33
TY2A-LR1P0C2J4 MBF1YOR298C-A 456 nt6.76□□□□□ -1.33
TY2A-LR1P0C2J4 RPL43AYPR043W 279 nt6.76□□□□□ -1.33
TY2A-LR1P0C2J4 ELP3YPL086C 1674 nt6.76□□□□□ -1.33
TY2A-LR1P0C2J4 MPE1YKL059C 1326 nt6.76□□□□□ -1.33
TY2A-LR1P0C2J4 RBS1YDL189W 1374 nt6.75□□□□□ -1.33
TY2A-LR1P0C2J4 ORM1YGR038W 669 nt6.75□□□□□ -1.33
TY2A-LR1P0C2J4 DPH5YLR172C 903 nt6.75□□□□□ -1.33
TY2A-LR1P0C2J4 LAT1YNL071W 1449 nt6.75□□□□□ -1.33
TY2A-LR1P0C2J4 CTF3YLR381W 2202 nt6.74□□□□□ -1.33
TY2A-LR1P0C2J4 YOX1YML027W 1158 nt6.74□□□□□ -1.33
TY2A-LR1P0C2J4 YMR253CYMR253C 1245 nt6.74□□□□□ -1.33
TY2A-LR1P0C2J4 RTC4YNL254C 1206 nt6.74□□□□□ -1.33
TY2A-LR1P0C2J4 FLC2YAL053W 2352 nt6.74□□□□□ -1.33
TY2A-LR1P0C2J4 PGI1YBR196C 1665 nt6.74□□□□□ -1.33
TY2A-LR1P0C2J4 GUT1YHL032C 2130 nt6.73□□□□□ -1.33
TY2A-LR1P0C2J4 RRP46YGR095C 672 nt6.73□□□□□ -1.33
TY2A-LR1P0C2J4 YHM2YMR241W 945 nt6.73□□□□□ -1.33
TY2A-LR1P0C2J4 OST3YOR085W 1053 nt6.73□□□□□ -1.33
TY2A-LR1P0C2J4 RMD8YFR048W 1989 nt6.73□□□□□ -1.33
TY2A-LR1P0C2J4 ERR3YMR323W 1314 nt6.73□□□□□ -1.33
TY2A-LR1P0C2J4 ERR1YOR393W 1314 nt6.73□□□□□ -1.33
TY2A-LR1P0C2J4 ERR2YPL281C 1314 nt6.73□□□□□ -1.33
TY2A-LR1P0C2J4 FCY2YER056C 1602 nt6.72□□□□□ -1.33
TY2A-LR1P0C2J4 NUP57YGR119C 1626 nt6.72□□□□□ -1.33
TY2A-LR1P0C2J4 DMC1YER179W 1005 nt6.72□□□□□ -1.33
TY2A-LR1P0C2J4 YKR018CYKR018C 2178 nt6.72□□□□□ -1.33
TY2A-LR1P0C2J4 PDA1YER178W 1263 nt6.71□□□□□ -1.34
TY2A-LR1P0C2J4 AIM46YHR199C 933 nt6.71□□□□□ -1.34
TY2A-LR1P0C2J4 ERG27YLR100W 1044 nt6.71□□□□□ -1.34
TY2A-LR1P0C2J4 GET4YOR164C 939 nt6.71□□□□□ -1.34
TY2A-LR1P0C2J4 YPR130CYPR130C 408 nt6.71□□□□□ -1.34
TY2A-LR1P0C2J4 snR30snR30 606 nt6.71□□□□□ -1.34
TY2A-LR1P0C2J4 GDA1YEL042W 1557 nt6.7□□□□□ -1.34
TY2A-LR1P0C2J4 YPL247CYPL247C 1572 nt6.7□□□□□ -1.34
TY2A-LR1P0C2J4 NAF1YNL124W 1479 nt6.7□□□□□ -1.34
TY2A-LR1P0C2J4 PMA2YPL036W 2844 nt6.7□□□□□ -1.34
TY2A-LR1P0C2J4 HOG1YLR113W 1308 nt6.7□□□□□ -1.34
TY2A-LR1P0C2J4 EXG2YDR261C 1689 nt6.69□□□□□ -1.34
TY2A-LR1P0C2J4 DAL7YIR031C 1665 nt6.69□□□□□ -1.34
TY2A-LR1P0C2J4 YCR049CYCR049C 447 nt6.69□□□□□ -1.34
TY2A-LR1P0C2J4 YHR145CYHR145C 357 nt6.69□□□□□ -1.34
TY2A-LR1P0C2J4 PRB1YEL060C 1908 nt6.69□□□□□ -1.34
TY2A-LR1P0C2J4 NDE1YMR145C 1683 nt6.68□□□□□ -1.34
TY2A-LR1P0C2J4 CIA1YDR267C 993 nt6.68□□□□□ -1.34
TY2A-LR1P0C2J4 PLB2YMR006C 2121 nt6.68□□□□□ -1.34
TY2A-LR1P0C2J4 POX1YGL205W 2247 nt6.68□□□□□ -1.34
TY2A-LR1P0C2J4 MHP1YJL042W 4197 nt6.67□□□□□ -1.34
TY2A-LR1P0C2J4 YER137CYER137C 447 nt6.67□□□□□ -1.34
TY2A-LR1P0C2J4 THR1YHR025W 1074 nt6.67□□□□□ -1.34
TY2A-LR1P0C2J4 SUN4YNL066W 1263 nt6.67□□□□□ -1.34
TY2A-LR1P0C2J4 TOD6YBL054W 1578 nt6.66□□□□□ -1.34
TY2A-LR1P0C2J4 COS10YNR075W 1125 nt6.66□□□□□ -1.34
TY2A-LR1P0C2J4 SEC24YIL109C 2781 nt6.66□□□□□ -1.34
TY2A-LR1P0C2J4 AQR1YNL065W 1761 nt6.65□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms