Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SFTPBP07988 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SFTPBP07988 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SFTPBP07988 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.05■□□□□ 0.16
SFTPBP07988 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SFTPBP07988 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SFTPBP07988 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.05■□□□□ 0.16
SFTPBP07988 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SFTPBP07988 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SFTPBP07988 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SFTPBP07988 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SFTPBP07988 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SFTPBP07988 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SFTPBP07988 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SFTPBP07988 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.04■□□□□ 0.16
SFTPBP07988 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SFTPBP07988 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SFTPBP07988 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SFTPBP07988 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.04■□□□□ 0.16
SFTPBP07988 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SFTPBP07988 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.04■□□□□ 0.16
SFTPBP07988 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SFTPBP07988 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SFTPBP07988 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SFTPBP07988 KRT8P11-201ENST00000409686 1436 ntBASIC16.04■□□□□ 0.16
SFTPBP07988 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SFTPBP07988 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SFTPBP07988 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SFTPBP07988 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SFTPBP07988 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.04■□□□□ 0.16
SFTPBP07988 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SFTPBP07988 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SFTPBP07988 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SFTPBP07988 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.04■□□□□ 0.16
SFTPBP07988 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SFTPBP07988 AC004980.1-204ENST00000429707 299 ntBASIC16.04■□□□□ 0.16
SFTPBP07988 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.04■□□□□ 0.16
SFTPBP07988 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SFTPBP07988 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.04■□□□□ 0.16
SFTPBP07988 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.04■□□□□ 0.16
SFTPBP07988 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.04■□□□□ 0.16
SFTPBP07988 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.04■□□□□ 0.16
SFTPBP07988 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.04■□□□□ 0.16
SFTPBP07988 AL355075.4-201ENST00000554988 638 ntBASIC16.04■□□□□ 0.16
SFTPBP07988 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.04■□□□□ 0.16
SFTPBP07988 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.04■□□□□ 0.16
SFTPBP07988 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.04■□□□□ 0.16
SFTPBP07988 AL353708.3-201ENST00000610272 989 ntBASIC16.04■□□□□ 0.16
SFTPBP07988 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SFTPBP07988 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SFTPBP07988 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SFTPBP07988 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SFTPBP07988 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.04■□□□□ 0.16
SFTPBP07988 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SFTPBP07988 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SFTPBP07988 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.04■□□□□ 0.16
SFTPBP07988 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SFTPBP07988 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SFTPBP07988 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SFTPBP07988 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SFTPBP07988 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.03■□□□□ 0.16
SFTPBP07988 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.03■□□□□ 0.16
SFTPBP07988 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.03■□□□□ 0.16
SFTPBP07988 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.03■□□□□ 0.16
SFTPBP07988 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SFTPBP07988 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.03■□□□□ 0.16
SFTPBP07988 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
SFTPBP07988 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SFTPBP07988 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.03■□□□□ 0.16
SFTPBP07988 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
SFTPBP07988 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.03■□□□□ 0.16
SFTPBP07988 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.03■□□□□ 0.16
SFTPBP07988 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.03■□□□□ 0.16
SFTPBP07988 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.03■□□□□ 0.16
SFTPBP07988 AC131212.4-201ENST00000623606 975 ntBASIC16.03■□□□□ 0.16
SFTPBP07988 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.03■□□□□ 0.16
SFTPBP07988 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.03■□□□□ 0.16
SFTPBP07988 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
SFTPBP07988 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SFTPBP07988 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SFTPBP07988 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms