Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNAP47Q5SQN1 AC069148.1-201ENST00000608741 768 ntBASIC18.03■□□□□ 0.48
SNAP47Q5SQN1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.03■□□□□ 0.48
SNAP47Q5SQN1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNAP47Q5SQN1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNAP47Q5SQN1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNAP47Q5SQN1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNAP47Q5SQN1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNAP47Q5SQN1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SNAP47Q5SQN1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.03■□□□□ 0.48
SNAP47Q5SQN1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNAP47Q5SQN1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 HCG4P8-203ENST00000443049 980 ntBASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.02■□□□□ 0.48
SNAP47Q5SQN1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SNAP47Q5SQN1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNAP47Q5SQN1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNAP47Q5SQN1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
SNAP47Q5SQN1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNAP47Q5SQN1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.02■□□□□ 0.47
SNAP47Q5SQN1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNAP47Q5SQN1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
SNAP47Q5SQN1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.02■□□□□ 0.47
SNAP47Q5SQN1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.02■□□□□ 0.47
SNAP47Q5SQN1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.47
SNAP47Q5SQN1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.02■□□□□ 0.47
SNAP47Q5SQN1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 AC008556.1-201ENST00000610908 2040 ntBASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 AL512353.2-201ENST00000448759 1962 ntBASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 AC112497.1-201ENST00000624824 639 ntBASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 NEFHP1-201ENST00000412845 2629 ntBASIC18.01■□□□□ 0.47
SNAP47Q5SQN1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNAP47Q5SQN1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNAP47Q5SQN1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNAP47Q5SQN1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SNAP47Q5SQN1 IRX1P1-201ENST00000438849 1838 ntBASIC18■□□□□ 0.47
SNAP47Q5SQN1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNAP47Q5SQN1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18■□□□□ 0.47
SNAP47Q5SQN1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18■□□□□ 0.47
SNAP47Q5SQN1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNAP47Q5SQN1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SNAP47Q5SQN1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SNAP47Q5SQN1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SNAP47Q5SQN1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNAP47Q5SQN1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNAP47Q5SQN1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNAP47Q5SQN1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNAP47Q5SQN1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNAP47Q5SQN1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SNAP47Q5SQN1 HBZP1-201ENST00000354915 429 ntBASIC18■□□□□ 0.47
SNAP47Q5SQN1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNAP47Q5SQN1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNAP47Q5SQN1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18■□□□□ 0.47
SNAP47Q5SQN1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18■□□□□ 0.47
SNAP47Q5SQN1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
SNAP47Q5SQN1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms