Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.19■□□□□ 0.18
SFTPBP07988 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.19■□□□□ 0.18
SFTPBP07988 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.19■□□□□ 0.18
SFTPBP07988 Z98044.1-201ENST00000632503 1764 ntBASIC16.19■□□□□ 0.18
SFTPBP07988 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 TSPY7P-201ENST00000431358 1114 ntBASIC16.19■□□□□ 0.18
SFTPBP07988 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 KRT16P5-201ENST00000455284 522 ntBASIC16.19■□□□□ 0.18
SFTPBP07988 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 MIR4497-201ENST00000583208 89 ntBASIC16.19■□□□□ 0.18
SFTPBP07988 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SFTPBP07988 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SFTPBP07988 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SFTPBP07988 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SFTPBP07988 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.19■□□□□ 0.18
SFTPBP07988 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SFTPBP07988 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SFTPBP07988 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SFTPBP07988 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SFTPBP07988 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SFTPBP07988 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SFTPBP07988 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.18■□□□□ 0.18
SFTPBP07988 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SFTPBP07988 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SFTPBP07988 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.18■□□□□ 0.18
SFTPBP07988 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SFTPBP07988 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SFTPBP07988 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SFTPBP07988 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.18■□□□□ 0.18
SFTPBP07988 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.18■□□□□ 0.18
SFTPBP07988 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.18■□□□□ 0.18
SFTPBP07988 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.18■□□□□ 0.18
SFTPBP07988 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.18■□□□□ 0.18
SFTPBP07988 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.18■□□□□ 0.18
SFTPBP07988 RARRES2P10-201ENST00000564312 460 ntBASIC16.18■□□□□ 0.18
SFTPBP07988 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SFTPBP07988 AL049637.2-201ENST00000641778 930 ntBASIC16.18■□□□□ 0.18
SFTPBP07988 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SFTPBP07988 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.18■□□□□ 0.18
SFTPBP07988 WIZP1-201ENST00000531444 2299 ntBASIC16.18■□□□□ 0.18
SFTPBP07988 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SFTPBP07988 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SFTPBP07988 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.18■□□□□ 0.18
SFTPBP07988 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SFTPBP07988 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SFTPBP07988 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SFTPBP07988 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.18■□□□□ 0.18
SFTPBP07988 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SFTPBP07988 AL135905.2-201ENST00000584934 1404 ntBASIC16.18■□□□□ 0.18
SFTPBP07988 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SFTPBP07988 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SFTPBP07988 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SFTPBP07988 HTR7P1-201ENST00000538670 1336 ntBASIC16.18■□□□□ 0.18
SFTPBP07988 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.18■□□□□ 0.18
SFTPBP07988 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.18■□□□□ 0.18
SFTPBP07988 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SFTPBP07988 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SFTPBP07988 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.17■□□□□ 0.18
SFTPBP07988 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SFTPBP07988 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.17■□□□□ 0.18
SFTPBP07988 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.17■□□□□ 0.18
SFTPBP07988 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SFTPBP07988 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 TSPY21P-201ENST00000433481 731 ntBASIC16.17■□□□□ 0.18
SFTPBP07988 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.17■□□□□ 0.18
SFTPBP07988 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.17■□□□□ 0.18
SFTPBP07988 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.17■□□□□ 0.18
SFTPBP07988 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
SFTPBP07988 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.17■□□□□ 0.18
SFTPBP07988 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SFTPBP07988 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms