Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SFTPBP07988 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SFTPBP07988 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.22■□□□□ 0.19
SFTPBP07988 AC004264.1-201ENST00000608354 794 ntBASIC16.22■□□□□ 0.19
SFTPBP07988 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.22■□□□□ 0.19
SFTPBP07988 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SFTPBP07988 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.22■□□□□ 0.19
SFTPBP07988 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SFTPBP07988 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SFTPBP07988 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SFTPBP07988 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SFTPBP07988 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SFTPBP07988 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SFTPBP07988 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.21■□□□□ 0.19
SFTPBP07988 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SFTPBP07988 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SFTPBP07988 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
SFTPBP07988 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.21■□□□□ 0.19
SFTPBP07988 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SFTPBP07988 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.21■□□□□ 0.19
SFTPBP07988 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SFTPBP07988 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SFTPBP07988 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SFTPBP07988 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SFTPBP07988 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.21■□□□□ 0.19
SFTPBP07988 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SFTPBP07988 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SFTPBP07988 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SFTPBP07988 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SFTPBP07988 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SFTPBP07988 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.21■□□□□ 0.19
SFTPBP07988 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SFTPBP07988 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.21■□□□□ 0.19
SFTPBP07988 AL160286.2-201ENST00000567150 934 ntBASIC16.21■□□□□ 0.19
SFTPBP07988 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SFTPBP07988 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.21■□□□□ 0.19
SFTPBP07988 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
SFTPBP07988 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SFTPBP07988 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SFTPBP07988 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SFTPBP07988 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
SFTPBP07988 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SFTPBP07988 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SFTPBP07988 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
SFTPBP07988 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
SFTPBP07988 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.21■□□□□ 0.18
SFTPBP07988 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SFTPBP07988 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 AC009113.1-201ENST00000570267 2443 ntBASIC16.2■□□□□ 0.18
SFTPBP07988 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
SFTPBP07988 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SFTPBP07988 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.2■□□□□ 0.18
SFTPBP07988 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SFTPBP07988 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 AC012618.2-201ENST00000428058 849 ntBASIC16.2■□□□□ 0.18
SFTPBP07988 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.2■□□□□ 0.18
SFTPBP07988 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.2■□□□□ 0.18
SFTPBP07988 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.2■□□□□ 0.18
SFTPBP07988 AC233702.5-201ENST00000584107 538 ntBASIC16.2■□□□□ 0.18
SFTPBP07988 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.2■□□□□ 0.18
SFTPBP07988 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
SFTPBP07988 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.2■□□□□ 0.18
SFTPBP07988 AC079598.2-202ENST00000546624 1451 ntBASIC16.2■□□□□ 0.18
SFTPBP07988 AL390961.4-201ENST00000623958 2535 ntBASIC16.2■□□□□ 0.18
SFTPBP07988 AC093525.10-201ENST00000625130 1569 ntBASIC16.2■□□□□ 0.18
SFTPBP07988 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SFTPBP07988 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SFTPBP07988 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 AL512353.2-201ENST00000448759 1962 ntBASIC16.2■□□□□ 0.18
SFTPBP07988 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SFTPBP07988 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.19■□□□□ 0.18
SFTPBP07988 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.19■□□□□ 0.18
SFTPBP07988 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.19■□□□□ 0.18
SFTPBP07988 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.19■□□□□ 0.18
SFTPBP07988 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.19■□□□□ 0.18
SFTPBP07988 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SFTPBP07988 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.19■□□□□ 0.18
SFTPBP07988 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SFTPBP07988 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms