Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KRT78Q8N1N4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KRT78Q8N1N4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.08■□□□□ 0.48
KRT78Q8N1N4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.08■□□□□ 0.48
KRT78Q8N1N4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KRT78Q8N1N4 AC093827.2-201ENST00000512654 315 ntBASIC18.08■□□□□ 0.48
KRT78Q8N1N4 FITM1-202ENST00000559294 800 ntBASIC18.08■□□□□ 0.48
KRT78Q8N1N4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
KRT78Q8N1N4 AP000525.1-201ENST00000608286 694 ntBASIC18.08■□□□□ 0.48
KRT78Q8N1N4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.08■□□□□ 0.48
KRT78Q8N1N4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.08■□□□□ 0.48
KRT78Q8N1N4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KRT78Q8N1N4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
KRT78Q8N1N4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KRT78Q8N1N4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.08■□□□□ 0.48
KRT78Q8N1N4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 AL355075.4-201ENST00000554988 638 ntBASIC18.07■□□□□ 0.48
KRT78Q8N1N4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 RCC2P3-201ENST00000418112 1537 ntBASIC18.07■□□□□ 0.48
KRT78Q8N1N4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 AL138781.2-201ENST00000617896 1843 ntBASIC18.07■□□□□ 0.48
KRT78Q8N1N4 AC079598.2-202ENST00000546624 1451 ntBASIC18.07■□□□□ 0.48
KRT78Q8N1N4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
KRT78Q8N1N4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 MIR1238-201ENST00000408483 83 ntBASIC18.06■□□□□ 0.48
KRT78Q8N1N4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 AC066615.1-201ENST00000640911 628 ntBASIC18.06■□□□□ 0.48
KRT78Q8N1N4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
KRT78Q8N1N4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 SLC25A1P2-201ENST00000430693 912 ntBASIC18.05■□□□□ 0.48
KRT78Q8N1N4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 C2orf69P3-201ENST00000565542 1120 ntBASIC18.05■□□□□ 0.48
KRT78Q8N1N4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.05■□□□□ 0.48
KRT78Q8N1N4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms