Protein–RNA interactions for Protein: P21771

MRPS28, 37S ribosomal protein S28, mitochondrial, yeast

Predictions only

Length 286 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPS28	P21771	GSH1	YJL101C	2037 nt		7.28	□□□□□ -1.24
MRPS28	P21771	THI73	YLR004C	1572 nt		7.28	□□□□□ -1.24
MRPS28	P21771	BDF2	YDL070W	1917 nt		7.27	□□□□□ -1.25
MRPS28	P21771	YDR215C	YDR215C	414 nt		7.27	□□□□□ -1.25
MRPS28	P21771	MAS1	YLR163C	1389 nt		7.27	□□□□□ -1.25
MRPS28	P21771	SGE1	YPR198W	1632 nt		7.27	□□□□□ -1.25
MRPS28	P21771	SHC1	YER096W	1539 nt		7.27	□□□□□ -1.25
MRPS28	P21771	YBR241C	YBR241C	1467 nt		7.26	□□□□□ -1.25
MRPS28	P21771	YAL045C	YAL045C	309 nt		7.26	□□□□□ -1.25
MRPS28	P21771	BXI1	YNL305C	894 nt		7.26	□□□□□ -1.25
MRPS28	P21771	KRE1	YNL322C	942 nt		7.26	□□□□□ -1.25
MRPS28	P21771	SNT309	YPR101W	528 nt		7.26	□□□□□ -1.25
MRPS28	P21771	ERS1	YCR075C	783 nt		7.25	□□□□□ -1.25
MRPS28	P21771	NAP1	YKR048C	1254 nt		7.25	□□□□□ -1.25
MRPS28	P21771	YPC1	YBR183W	951 nt		7.25	□□□□□ -1.25
MRPS28	P21771	GPH1	YPR160W	2709 nt		7.25	□□□□□ -1.25
MRPS28	P21771	ARP3	YJR065C	1350 nt		7.24	□□□□□ -1.25
MRPS28	P21771	HSP12	YFL014W	330 nt		7.24	□□□□□ -1.25
MRPS28	P21771	TAH11	YJR046W	1815 nt		7.24	□□□□□ -1.25
MRPS28	P21771	PRP2	YNR011C	2631 nt		7.23	□□□□□ -1.25
MRPS28	P21771	SUR7	YML052W	909 nt		7.23	□□□□□ -1.25
MRPS28	P21771	FSH2	YMR222C	672 nt		7.23	□□□□□ -1.25
MRPS28	P21771	TKL2	YBR117C	2046 nt		7.22	□□□□□ -1.25
MRPS28	P21771	FCY22	YER060W-A	1593 nt		7.22	□□□□□ -1.25
MRPS28	P21771	SEN2	YLR105C	1134 nt		7.22	□□□□□ -1.25
MRPS28	P21771	HOG1	YLR113W	1308 nt		7.22	□□□□□ -1.25
MRPS28	P21771	AMN1	YBR158W	1650 nt		7.21	□□□□□ -1.26
MRPS28	P21771	THP3	YPR045C	1413 nt		7.2	□□□□□ -1.26
MRPS28	P21771	SMC5	YOL034W	3282 nt		7.2	□□□□□ -1.26
MRPS28	P21771	ERG24	YNL280C	1317 nt		7.2	□□□□□ -1.26
MRPS28	P21771	PHO3	YBR092C	1404 nt		7.19	□□□□□ -1.26
MRPS28	P21771	NIF3	YGL221C	867 nt		7.19	□□□□□ -1.26
MRPS28	P21771	ADE17	YMR120C	1779 nt		7.18	□□□□□ -1.26
MRPS28	P21771	CCT3	YJL014W	1605 nt		7.18	□□□□□ -1.26
MRPS28	P21771	DAL80	YKR034W	810 nt		7.17	□□□□□ -1.26
MRPS28	P21771	YNL200C	YNL200C	741 nt		7.17	□□□□□ -1.26
MRPS28	P21771	ENO1	YGR254W	1314 nt		7.16	□□□□□ -1.26
MRPS28	P21771	ARG7	YMR062C	1326 nt		7.16	□□□□□ -1.26
MRPS28	P21771	AVT4	YNL101W	2142 nt		7.16	□□□□□ -1.26
MRPS28	P21771	PRE10	YOR362C	867 nt		7.15	□□□□□ -1.26
MRPS28	P21771	HBN1	YCL026C-B	582 nt		7.15	□□□□□ -1.26
MRPS28	P21771	VBA5	YKR105C	1749 nt		7.15	□□□□□ -1.27
MRPS28	P21771	NAS2	YIL007C	663 nt		7.14	□□□□□ -1.27
MRPS28	P21771	OPI8	YKR035C	642 nt		7.14	□□□□□ -1.27
MRPS28	P21771	KNS1	YLL019C	2214 nt		7.14	□□□□□ -1.27
MRPS28	P21771	YDR510C-A	YDR510C-A	117 nt		7.13	□□□□□ -1.27
MRPS28	P21771	HXT2	YMR011W	1626 nt		7.12	□□□□□ -1.27
MRPS28	P21771	CEM1	YER061C	1329 nt		7.12	□□□□□ -1.27
MRPS28	P21771	COX16	YJL003W	357 nt		7.12	□□□□□ -1.27
MRPS28	P21771	YJL064W	YJL064W	396 nt		7.12	□□□□□ -1.27
MRPS28	P21771	PAU19	YMR325W	375 nt		7.12	□□□□□ -1.27
MRPS28	P21771	SUN4	YNL066W	1263 nt		7.12	□□□□□ -1.27
MRPS28	P21771	OCH1	YGL038C	1443 nt		7.11	□□□□□ -1.27
MRPS28	P21771	CEF1	YMR213W	1773 nt		7.11	□□□□□ -1.27
MRPS28	P21771	IGD1	YFR017C	588 nt		7.11	□□□□□ -1.27
MRPS28	P21771	TOS1	YBR162C	1368 nt		7.09	□□□□□ -1.27
MRPS28	P21771	MRPL28	YDR462W	444 nt		7.09	□□□□□ -1.27
MRPS28	P21771	CPR2	YHR057C	618 nt		7.09	□□□□□ -1.27
MRPS28	P21771	YNR014W	YNR014W	639 nt		7.09	□□□□□ -1.27
MRPS28	P21771	TIM50	YPL063W	1431 nt		7.09	□□□□□ -1.28
MRPS28	P21771	TDP1	YBR223C	1635 nt		7.09	□□□□□ -1.28
MRPS28	P21771	YUR1	YJL139C	1287 nt		7.08	□□□□□ -1.28
MRPS28	P21771	PUP1	YOR157C	786 nt		7.08	□□□□□ -1.28
MRPS28	P21771	ISC1	YER019W	1434 nt		7.07	□□□□□ -1.28
MRPS28	P21771	SWM1	YDR260C	513 nt		7.06	□□□□□ -1.28
MRPS28	P21771	PHO85	YPL031C	918 nt		7.06	□□□□□ -1.28
MRPS28	P21771	ECM27	YJR106W	2178 nt		7.06	□□□□□ -1.28
MRPS28	P21771	CDC7	YDL017W	1524 nt		7.06	□□□□□ -1.28
MRPS28	P21771	MHP1	YJL042W	4197 nt		7.05	□□□□□ -1.28
MRPS28	P21771	YPT31	YER031C	672 nt		7.05	□□□□□ -1.28
MRPS28	P21771	OPI1	YHL020C	1215 nt		7.05	□□□□□ -1.28
MRPS28	P21771	RPL5	YPL131W	894 nt		7.05	□□□□□ -1.28
MRPS28	P21771	IRC5	YFR038W	2562 nt		7.05	□□□□□ -1.28
MRPS28	P21771	RDR1	YOR380W	1641 nt		7.05	□□□□□ -1.28
MRPS28	P21771	NMD5	YJR132W	3147 nt		7.04	□□□□□ -1.28
MRPS28	P21771	PHB2	YGR231C	933 nt		7.04	□□□□□ -1.28
MRPS28	P21771	ADH3	YMR083W	1128 nt		7.04	□□□□□ -1.28
MRPS28	P21771	RDN5-2	RDN5-2	119 nt		7.03	□□□□□ -1.28
MRPS28	P21771	RDN5-3	RDN5-3	119 nt		7.03	□□□□□ -1.28
MRPS28	P21771	RDN5-4	RDN5-4	119 nt		7.03	□□□□□ -1.28
MRPS28	P21771	RDN5-5	RDN5-5	119 nt		7.03	□□□□□ -1.28
MRPS28	P21771	IPL1	YPL209C	1104 nt		7.02	□□□□□ -1.29
MRPS28	P21771	YPR127W	YPR127W	1038 nt		7.02	□□□□□ -1.29
MRPS28	P21771	JHD1	YER051W	1479 nt		7.02	□□□□□ -1.29
MRPS28	P21771	YIL055C	YIL055C	1884 nt		7.02	□□□□□ -1.29
MRPS28	P21771	RAP1	YNL216W	2484 nt		7.02	□□□□□ -1.29
MRPS28	P21771	RIO1	YOR119C	1455 nt		7.01	□□□□□ -1.29
MRPS28	P21771	PPH22	YDL188C	1134 nt		7.01	□□□□□ -1.29
MRPS28	P21771	CAK1	YFL029C	1107 nt		7.01	□□□□□ -1.29
MRPS28	P21771	MOB1	YIL106W	945 nt		7.01	□□□□□ -1.29
MRPS28	P21771	CDD1	YLR245C	429 nt		7.01	□□□□□ -1.29
MRPS28	P21771	AIM33	YML087C	939 nt		7.01	□□□□□ -1.29
MRPS28	P21771	MIX17	YMR002W	471 nt		7.01	□□□□□ -1.29
MRPS28	P21771	CRN1	YLR429W	1956 nt		7	□□□□□ -1.29
MRPS28	P21771	tA(AGC)D	tA(AGC)D	73 nt		7	□□□□□ -1.29
MRPS28	P21771	tA(AGC)F	tA(AGC)F	73 nt		7	□□□□□ -1.29
MRPS28	P21771	tA(AGC)G	tA(AGC)G	73 nt		7	□□□□□ -1.29
MRPS28	P21771	tA(AGC)H	tA(AGC)H	73 nt		7	□□□□□ -1.29
MRPS28	P21771	tA(AGC)J	tA(AGC)J	73 nt		7	□□□□□ -1.29
MRPS28	P21771	tA(AGC)K1	tA(AGC)K1	73 nt		7	□□□□□ -1.29

Retrieved 100 of 7,029 protein–RNA pairs in 34.9 ms