Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	GPA1	YHR005C	1419 nt		7.93	□□□□□ -1.14
TY4B-P	A0A0B7P3V8	PRP2	YNR011C	2631 nt		7.93	□□□□□ -1.14
TY4B-P	A0A0B7P3V8	NUP57	YGR119C	1626 nt		7.92	□□□□□ -1.14
TY4B-P	A0A0B7P3V8	YIL092W	YIL092W	1902 nt		7.92	□□□□□ -1.14
TY4B-P	A0A0B7P3V8	YHR054C	YHR054C	1065 nt		7.92	□□□□□ -1.14
TY4B-P	A0A0B7P3V8	NAS2	YIL007C	663 nt		7.92	□□□□□ -1.14
TY4B-P	A0A0B7P3V8	MRS4	YKR052C	915 nt		7.92	□□□□□ -1.14
TY4B-P	A0A0B7P3V8	YNL319W	YNL319W	441 nt		7.92	□□□□□ -1.14
TY4B-P	A0A0B7P3V8	YOR041C	YOR041C	432 nt		7.92	□□□□□ -1.14
TY4B-P	A0A0B7P3V8	TAZ1	YPR140W	1146 nt		7.92	□□□□□ -1.14
TY4B-P	A0A0B7P3V8	PTC6	YCR079W	1329 nt		7.92	□□□□□ -1.14
TY4B-P	A0A0B7P3V8	DIA4	YHR011W	1341 nt		7.92	□□□□□ -1.14
TY4B-P	A0A0B7P3V8	TRP2	YER090W	1524 nt		7.92	□□□□□ -1.14
TY4B-P	A0A0B7P3V8	YPT11	YNL304W	1254 nt		7.91	□□□□□ -1.14
TY4B-P	A0A0B7P3V8	NMD5	YJR132W	3147 nt		7.91	□□□□□ -1.14
TY4B-P	A0A0B7P3V8	ADE17	YMR120C	1779 nt		7.9	□□□□□ -1.14
TY4B-P	A0A0B7P3V8	POB3	YML069W	1659 nt		7.9	□□□□□ -1.14
TY4B-P	A0A0B7P3V8	YIP4	YGL198W	708 nt		7.9	□□□□□ -1.14
TY4B-P	A0A0B7P3V8	NMD4	YLR363C	657 nt		7.9	□□□□□ -1.14
TY4B-P	A0A0B7P3V8	YGR011W	YGR011W	327 nt		7.89	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	PTC7	YHR076W	1032 nt		7.89	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	EMC3	YKL207W	762 nt		7.89	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	YKR012C	YKR012C	378 nt		7.89	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	RSA3	YLR221C	663 nt		7.89	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	YPL264C	YPL264C	1062 nt		7.89	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	RGT2	YDL138W	2292 nt		7.89	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	SLX1	YBR228W	915 nt		7.88	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	ICL2	YPR006C	1728 nt		7.88	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	HXT11	YOL156W	1704 nt		7.87	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	COS6	YGR295C	1146 nt		7.87	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	Q0017	Q0017	162 nt		7.87	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	ACO1	YLR304C	2337 nt		7.87	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	VTS1	YOR359W	1572 nt		7.87	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	PEX22	YAL055W	543 nt		7.86	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	APT1	YML022W	564 nt		7.86	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	AGP2	YBR132C	1791 nt		7.86	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	HGH1	YGR187C	1185 nt		7.85	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	CDD1	YLR245C	429 nt		7.85	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	SDS24	YBR214W	1584 nt		7.84	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	PMT7	YDR307W	1989 nt		7.84	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	EHD3	YDR036C	1503 nt		7.84	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	TRR1	YDR353W	960 nt		7.84	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	IGD1	YFR017C	588 nt		7.84	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	DBR1	YKL149C	1218 nt		7.84	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	MRPL24	YMR193W	777 nt		7.84	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	YOL107W	YOL107W	1029 nt		7.84	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	NDE2	YDL085W	1638 nt		7.84	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	TMS1	YDR105C	1422 nt		7.84	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	GFA1	YKL104C	2154 nt		7.84	□□□□□ -1.15
TY4B-P	A0A0B7P3V8	YIL177C	YIL177C	5277 nt		7.83	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	YJL064W	YJL064W	396 nt		7.83	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	LIP2	YLR239C	987 nt		7.83	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	YNL303W	YNL303W	348 nt		7.83	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	PRM4	YPL156C	855 nt		7.83	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	FES1	YBR101C	873 nt		7.83	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	MAD2	YJL030W	591 nt		7.82	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	RSM7	YJR113C	744 nt		7.82	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	REX3	YLR107W	1215 nt		7.82	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	YLR412C-A	YLR412C-A	207 nt		7.82	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	SPC24	YMR117C	642 nt		7.82	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	PAU19	YMR325W	375 nt		7.82	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	LRO1	YNR008W	1986 nt		7.82	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	VBA3	YCL069W	1377 nt		7.82	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	ISR1	YPR106W	1332 nt		7.81	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	SRM1	YGL097W	1449 nt		7.81	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	LYS20	YDL182W	1287 nt		7.81	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	snR86	snR86	1004 nt		7.81	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	PHB2	YGR231C	933 nt		7.81	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	YHR145C	YHR145C	357 nt		7.81	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	ADH3	YMR083W	1128 nt		7.81	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	SGE1	YPR198W	1632 nt		7.81	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	YJL009W	YJL009W	327 nt		7.8	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	YLR169W	YLR169W	354 nt		7.8	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	OSW1	YOR255W	837 nt		7.8	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	ARR1	YPR199C	885 nt		7.8	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	MOB1	YIL106W	945 nt		7.79	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	VAM3	YOR106W	852 nt		7.79	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	PUP1	YOR157C	786 nt		7.79	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	ENO1	YGR254W	1314 nt		7.78	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	YGR283C	YGR283C	1026 nt		7.78	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	YHR022C	YHR022C	771 nt		7.78	□□□□□ -1.16
TY4B-P	A0A0B7P3V8	YIR035C	YIR035C	765 nt		7.77	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	RCF2	YNR018W	675 nt		7.77	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	YOL079W	YOL079W	399 nt		7.77	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	POS5	YPL188W	1245 nt		7.77	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	snR189	snR189	189 nt		7.77	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	MHO1	YJR008W	1017 nt		7.76	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	YJR149W	YJR149W	1215 nt		7.76	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	MSA2	YKR077W	1092 nt		7.76	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	CSI1	YMR025W	888 nt		7.76	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	YPL277C	YPL277C	1464 nt		7.75	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	YFR020W	YFR020W	699 nt		7.75	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	ISA2	YPR067W	558 nt		7.75	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	RER1	YCL001W	567 nt		7.75	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	HXT9	YJL219W	1704 nt		7.75	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	ECM9	YKR004C	1134 nt		7.74	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	YKR104W	YKR104W	921 nt		7.74	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	BUB2	YMR055C	921 nt		7.74	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	DSC2	YOL073C	969 nt		7.74	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	RRP40	YOL142W	723 nt		7.74	□□□□□ -1.17

Retrieved 100 of 7,029 protein–RNA pairs in 17.3 ms