RNA–Protein interactions for RNA: ENST00000614800.4

SNX9-203, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-203ENST00000614800 NISCHQ9Y2I1 1504 aa14.75□□□□□ -0.05
SNX9-203ENST00000614800 CCDC180Q9P1Z9 1646 aa13.34□□□□□ -0.27
SNX9-203ENST00000614800 ABCC9O60706 1549 aa13.25□□□□□ -0.29
SNX9-203ENST00000614800 RB1CC1Q8TDY2 1594 aa12.66□□□□□ -0.38
SNX9-203ENST00000614800 UNC13AQ9UPW8 1703 aa12.51□□□□□ -0.41
SNX9-203ENST00000614800 NACADO15069 1562 aa12.51□□□□□ -0.41
SNX9-203ENST00000614800 DNAJC5BQ9UF47 199 aa12.44□□□□□ -0.42
SNX9-203ENST00000614800 AEBP2Q6ZN18 517 aaPredicted RBP12.39□□□□□ -0.43
SNX9-203ENST00000614800 ZCCHC6Q5VYS8 1495 aaKnown RBP12.38□□□□□ -0.43
SNX9-203ENST00000614800 MYO15BQ96JP2 1530 aa12.31□□□□□ -0.44
SNX9-203ENST00000614800 BICRAQ9NZM4 1560 aa12.3□□□□□ -0.44
SNX9-203ENST00000614800 DCAF8L2P0C7V8 631 aa12.25□□□□□ -0.45
SNX9-203ENST00000614800 DCAF1Q9Y4B6 1507 aa12.23□□□□□ -0.45
SNX9-203ENST00000614800 SHROOM4Q9ULL8 1493 aa12.21□□□□□ -0.45
SNX9-203ENST00000614800 PABPN1Q86U42 306 aaKnown RBP eCLIP12.12□□□□□ -0.47
SNX9-203ENST00000614800 CC2D2AQ9P2K1 1620 aa12.08□□□□□ -0.48
SNX9-203ENST00000614800 EIF4G1Q04637 1599 aaKnown RBP12.01□□□□□ -0.49
SNX9-203ENST00000614800 SCRIBQ14160 1630 aa12□□□□□ -0.49
SNX9-203ENST00000614800 CECR2Q9BXF3 1484 aa11.99□□□□□ -0.49
SNX9-203ENST00000614800 CHIC1Q5VXU3 224 aa11.75□□□□□ -0.53
SNX9-203ENST00000614800 SUPT5HO00267 1087 aaKnown RBP11.64□□□□□ -0.55
SNX9-203ENST00000614800 CUX2O14529 1486 aa11.63□□□□□ -0.55
SNX9-203ENST00000614800 DNAJC5Q9H3Z4 198 aa11.62□□□□□ -0.55
SNX9-203ENST00000614800 HMGXB3Q12766 1538 aa11.5□□□□□ -0.57
SNX9-203ENST00000614800 ERCC6Q03468 1493 aa11.49□□□□□ -0.57
SNX9-203ENST00000614800 THOC2Q8NI27 1593 aaKnown RBP11.47□□□□□ -0.57
SNX9-203ENST00000614800 NCAPD3P42695 1498 aa11.46□□□□□ -0.57
SNX9-203ENST00000614800 SMARCA4P51532 1647 aa11.46□□□□□ -0.58
SNX9-203ENST00000614800 SMARCA2P51531 1590 aa11.45□□□□□ -0.58
SNX9-203ENST00000614800 RSF1Q96T23 1441 aaPredicted RBP11.43□□□□□ -0.58
SNX9-203ENST00000614800 BAZ1AQ9NRL2 1556 aaPredicted RBP11.42□□□□□ -0.58
SNX9-203ENST00000614800 ATAD2BQ9ULI0 1458 aa11.4□□□□□ -0.58
SNX9-203ENST00000614800 PEG3Q9GZU2 1588 aa11.37□□□□□ -0.59
SNX9-203ENST00000614800 KIF21AQ7Z4S6 1674 aa11.37□□□□□ -0.59
SNX9-203ENST00000614800 LAMC3Q9Y6N6 1575 aa11.37□□□□□ -0.59
SNX9-203ENST00000614800 MROH2BQ7Z745 1585 aa11.36□□□□□ -0.59
SNX9-203ENST00000614800 NESP48681 1621 aa11.34□□□□□ -0.59
SNX9-203ENST00000614800 BAZ1BQ9UIG0 1483 aaKnown RBP11.31□□□□□ -0.6
SNX9-203ENST00000614800 WIZO95785 1651 aa11.26□□□□□ -0.61
SNX9-203ENST00000614800 WDR62O43379 1518 aa11.21□□□□□ -0.61
SNX9-203ENST00000614800 TOP2AP11388 1531 aaKnown RBP11.19□□□□□ -0.62
SNX9-203ENST00000614800 PDS5BQ9NTI5 1447 aa11.16□□□□□ -0.62
SNX9-203ENST00000614800 MRC2Q9UBG0 1479 aa11.15□□□□□ -0.62
SNX9-203ENST00000614800 PRDM2Q13029 1718 aa11.11□□□□□ -0.63
SNX9-203ENST00000614800 CEP164Q9UPV0 1460 aa11.07□□□□□ -0.64
SNX9-203ENST00000614800 CCDC88BA6NC98 1476 aa11.06□□□□□ -0.64
SNX9-203ENST00000614800 CADPSQ9ULU8 1353 aa11.03□□□□□ -0.64
SNX9-203ENST00000614800 TRIM41Q8WV44 630 aa10.99□□□□□ -0.65
SNX9-203ENST00000614800 FANCD2Q9BXW9 1451 aa10.99□□□□□ -0.65
SNX9-203ENST00000614800 RIMBP3CA6NJZ7 1639 aa10.97□□□□□ -0.65
SNX9-203ENST00000614800 RIMBP3BA6NNM3 1639 aa10.97□□□□□ -0.65
SNX9-203ENST00000614800 RIMBP3Q9UFD9 1639 aa10.97□□□□□ -0.65
SNX9-203ENST00000614800 CFTRP13569 1480 aa10.95□□□□□ -0.66
SNX9-203ENST00000614800 URB2Q14146 1524 aaKnown RBP10.94□□□□□ -0.66
SNX9-203ENST00000614800 EIF4G3O43432 1585 aaKnown RBP10.9□□□□□ -0.67
SNX9-203ENST00000614800 CHD1O14646 1710 aa10.87□□□□□ -0.67
SNX9-203ENST00000614800 ARHGEF11O15085 1522 aa10.86□□□□□ -0.67
SNX9-203ENST00000614800 IFT140Q96RY7 1462 aa10.83□□□□□ -0.68
SNX9-203ENST00000614800 WRNQ14191 1432 aaPredicted RBP eCLIP10.81□□□□□ -0.689e-6■■■■■ 50.1
SNX9-203ENST00000614800 ABCC8Q09428 1581 aa10.81□□□□□ -0.68
SNX9-203ENST00000614800 DNMBPQ6XZF7 1577 aa10.8□□□□□ -0.68
SNX9-203ENST00000614800 ZNF608Q9ULD9 1512 aaPredicted RBP10.79□□□□□ -0.68
SNX9-203ENST00000614800 OSCARQ8IYS5 282 aa10.79□□□□□ -0.68
SNX9-203ENST00000614800 TARBP1Q13395 1621 aaKnown RBP10.78□□□□□ -0.68
SNX9-203ENST00000614800 TOPBP1Q92547 1522 aa10.78□□□□□ -0.68
SNX9-203ENST00000614800 WDR97A6NE52 1622 aa10.75□□□□□ -0.69
SNX9-203ENST00000614800 ARAP1Q96P48 1450 aa10.74□□□□□ -0.69
SNX9-203ENST00000614800 FAM9AQ8IZU1 332 aaPredicted RBP10.73□□□□□ -0.69
SNX9-203ENST00000614800 EEA1Q15075 1411 aa10.72□□□□□ -0.69
SNX9-203ENST00000614800 TOP2BQ02880 1626 aa10.69□□□□□ -0.7
SNX9-203ENST00000614800 SYNJ1O43426 1573 aa10.69□□□□□ -0.7
SNX9-203ENST00000614800 CLASP1Q7Z460 1538 aa10.69□□□□□ -0.7
SNX9-203ENST00000614800 LOC105371045A0A1W2PR82 267 aa10.68□□□□□ -0.7
SNX9-203ENST00000614800 BIVM-ERCC5R4GMW8 1640 aa10.67□□□□□ -0.7
SNX9-203ENST00000614800 POLA1P09884 1462 aaPredicted RBP10.66□□□□□ -0.7
SNX9-203ENST00000614800 PBRM1Q86U86 1689 aa10.66□□□□□ -0.7
SNX9-203ENST00000614800 CSRNP3Q8WYN3 585 aa10.64□□□□□ -0.71
SNX9-203ENST00000614800 CUX1P39880 1505 aa10.63□□□□□ -0.71
SNX9-203ENST00000614800 SOGA1O94964 1423 aa10.62□□□□□ -0.71
SNX9-203ENST00000614800 SNAPC4Q5SXM2 1469 aa10.61□□□□□ -0.71
SNX9-203ENST00000614800 AQRO60306 1485 aaKnown RBP eCLIP10.6□□□□□ -0.712e-7■■■■■ 29.8
SNX9-203ENST00000614800 MAGI1Q96QZ7 1491 aaPredicted RBP10.6□□□□□ -0.71
SNX9-203ENST00000614800 SENP3Q9H4L4 574 aaPredicted RBP10.58□□□□□ -0.72
SNX9-203ENST00000614800 KIF27Q86VH2 1401 aa10.57□□□□□ -0.72
SNX9-203ENST00000614800 ABCA5Q8WWZ7 1642 aa10.56□□□□□ -0.72
SNX9-203ENST00000614800 EHMT2Q96KQ7 1210 aa10.56□□□□□ -0.72
SNX9-203ENST00000614800 FGD5Q6ZNL6 1462 aa10.55□□□□□ -0.72
SNX9-203ENST00000614800 RUSC2Q8N2Y8 1516 aa10.55□□□□□ -0.72
SNX9-203ENST00000614800 GOLGA3Q08378 1498 aa10.54□□□□□ -0.72
SNX9-203ENST00000614800 RAD54L2Q9Y4B4 1467 aa10.54□□□□□ -0.72
SNX9-203ENST00000614800 UBTFP17480 764 aaKnown RBP10.53□□□□□ -0.72
SNX9-203ENST00000614800 SYNJ2O15056 1496 aa10.53□□□□□ -0.72
SNX9-203ENST00000614800 CYB5RLQ6IPT4 315 aa10.52□□□□□ -0.73
SNX9-203ENST00000614800 KIF21BO75037 1637 aa10.51□□□□□ -0.73
SNX9-203ENST00000614800 GRIN2BQ13224 1484 aa10.51□□□□□ -0.73
SNX9-203ENST00000614800 TNIKQ9UKE5 1360 aa10.51□□□□□ -0.73
SNX9-203ENST00000614800 PHF23Q9BUL5 403 aaPredicted RBP10.5□□□□□ -0.73
SNX9-203ENST00000614800 ADAMTS12P58397 1594 aa10.49□□□□□ -0.73
SNX9-203ENST00000614800 TRHP20396 242 aaPredicted RBP10.48□□□□□ -0.73
SNX9-203ENST00000614800 SHROOM2Q13796 1616 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms