RNA–Protein interactions for RNA: ENST00000597711.5

SMIM7-214, Transcript of small integral membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene SMIM7, Length 1,075 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-214ENST00000597711 AEBP2Q6ZN18 517 aaPredicted RBP26.65■■□□□ 1.86
SMIM7-214ENST00000597711 CHIC1Q5VXU3 224 aa26.52■■□□□ 1.84
SMIM7-214ENST00000597711 NISCHQ9Y2I1 1504 aa25.06■■□□□ 1.6
SMIM7-214ENST00000597711 PHF23Q9BUL5 403 aaPredicted RBP23.29■■□□□ 1.32
SMIM7-214ENST00000597711 ABCC9O60706 1549 aa23.23■■□□□ 1.31
SMIM7-214ENST00000597711 SENP3Q9H4L4 574 aaPredicted RBP22.69■■□□□ 1.22
SMIM7-214ENST00000597711 CCDC180Q9P1Z9 1646 aa22.68■■□□□ 1.22
SMIM7-214ENST00000597711 DNAJC5BQ9UF47 199 aa22.22■■□□□ 1.15
SMIM7-214ENST00000597711 RB1CC1Q8TDY2 1594 aa21.8■■□□□ 1.08
SMIM7-214ENST00000597711 PLPPR3Q6T4P5 718 aa21.78■■□□□ 1.08
SMIM7-214ENST00000597711 PABPN1Q86U42 306 aaKnown RBP eCLIP21.53■■□□□ 1.04
SMIM7-214ENST00000597711 NACADO15069 1562 aa21.53■■□□□ 1.04
SMIM7-214ENST00000597711 UNC13AQ9UPW8 1703 aa21.45■■□□□ 1.02
SMIM7-214ENST00000597711 DCAF8L2P0C7V8 631 aa21.33■■□□□ 1.01
SMIM7-214ENST00000597711 BICRAQ9NZM4 1560 aa21.28■■□□□ 1
SMIM7-214ENST00000597711 MYO15BQ96JP2 1530 aa21.03■□□□□ 0.96
SMIM7-214ENST00000597711 CC2D2AQ9P2K1 1620 aa20.94■□□□□ 0.94
SMIM7-214ENST00000597711 CECR2Q9BXF3 1484 aa20.93■□□□□ 0.94
SMIM7-214ENST00000597711 FOXD1Q16676 465 aa20.91■□□□□ 0.94
SMIM7-214ENST00000597711 SHROOM4Q9ULL8 1493 aa20.78■□□□□ 0.92
SMIM7-214ENST00000597711 EIF4G1Q04637 1599 aaKnown RBP20.76■□□□□ 0.91
SMIM7-214ENST00000597711 SCRIBQ14160 1630 aa20.74■□□□□ 0.91
SMIM7-214ENST00000597711 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
SMIM7-214ENST00000597711 DNAJC5Q9H3Z4 198 aa20.64■□□□□ 0.89
SMIM7-214ENST00000597711 DCAF1Q9Y4B6 1507 aa20.6■□□□□ 0.89
SMIM7-214ENST00000597711 ADRA2BP18089 450 aa20.42■□□□□ 0.86
SMIM7-214ENST00000597711 PPP6R1Q9UPN7 881 aa20.39■□□□□ 0.85
SMIM7-214ENST00000597711 CUX2O14529 1486 aa20.11■□□□□ 0.81
SMIM7-214ENST00000597711 ERCC6Q03468 1493 aa20.02■□□□□ 0.8
SMIM7-214ENST00000597711 PIAS4Q8N2W9 510 aaPredicted RBP19.88■□□□□ 0.77
SMIM7-214ENST00000597711 NCAPD3P42695 1498 aa19.87■□□□□ 0.77
SMIM7-214ENST00000597711 NESP48681 1621 aa19.84■□□□□ 0.77
SMIM7-214ENST00000597711 ATAD2BQ9ULI0 1458 aa19.79■□□□□ 0.76
SMIM7-214ENST00000597711 THOC2Q8NI27 1593 aaKnown RBP19.73■□□□□ 0.75
SMIM7-214ENST00000597711 HMGXB3Q12766 1538 aa19.71■□□□□ 0.75
SMIM7-214ENST00000597711 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
SMIM7-214ENST00000597711 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
SMIM7-214ENST00000597711 TRIM41Q8WV44 630 aa19.6■□□□□ 0.73
SMIM7-214ENST00000597711 KIF21AQ7Z4S6 1674 aa19.57■□□□□ 0.72
SMIM7-214ENST00000597711 BAZ1BQ9UIG0 1483 aaKnown RBP19.57■□□□□ 0.72
SMIM7-214ENST00000597711 LAMC3Q9Y6N6 1575 aa19.52■□□□□ 0.71
SMIM7-214ENST00000597711 PEG3Q9GZU2 1588 aa19.45■□□□□ 0.7
SMIM7-214ENST00000597711 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
SMIM7-214ENST00000597711 PDS5BQ9NTI5 1447 aa19.37■□□□□ 0.69
SMIM7-214ENST00000597711 MROH2BQ7Z745 1585 aa19.36■□□□□ 0.69
SMIM7-214ENST00000597711 MRC2Q9UBG0 1479 aa19.31■□□□□ 0.68
SMIM7-214ENST00000597711 WDR62O43379 1518 aa19.3■□□□□ 0.68
SMIM7-214ENST00000597711 CADPSQ9ULU8 1353 aa19.25■□□□□ 0.67
SMIM7-214ENST00000597711 MSH5O43196 834 aa19.23■□□□□ 0.67
SMIM7-214ENST00000597711 PPP4R3CPQ6ZMV5 832 aa19.19■□□□□ 0.66
SMIM7-214ENST00000597711 KCNA4P22459 653 aa19.18■□□□□ 0.66
SMIM7-214ENST00000597711 CEP164Q9UPV0 1460 aa19.13■□□□□ 0.65
SMIM7-214ENST00000597711 WIZO95785 1651 aa19.13■□□□□ 0.65
SMIM7-214ENST00000597711 FANCD2Q9BXW9 1451 aa19.08■□□□□ 0.64
SMIM7-214ENST00000597711 OSCARQ8IYS5 282 aa19.06■□□□□ 0.64
SMIM7-214ENST00000597711 RIMBP3CA6NJZ7 1639 aa19.02■□□□□ 0.64
SMIM7-214ENST00000597711 RIMBP3BA6NNM3 1639 aa19.02■□□□□ 0.64
SMIM7-214ENST00000597711 RIMBP3Q9UFD9 1639 aa19.02■□□□□ 0.64
SMIM7-214ENST00000597711 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
SMIM7-214ENST00000597711 CFTRP13569 1480 aa18.95■□□□□ 0.62
SMIM7-214ENST00000597711 NCBP3Q53F19 620 aaKnown RBP18.9■□□□□ 0.62
SMIM7-214ENST00000597711 ARHGEF11O15085 1522 aa18.88■□□□□ 0.61
SMIM7-214ENST00000597711 ZNF608Q9ULD9 1512 aaPredicted RBP18.86■□□□□ 0.61
SMIM7-214ENST00000597711 SCAF1Q9H7N4 1312 aaKnown RBP18.85■□□□□ 0.61
SMIM7-214ENST00000597711 TOP2AP11388 1531 aaKnown RBP18.79■□□□□ 0.6
SMIM7-214ENST00000597711 PRDM2Q13029 1718 aa18.77■□□□□ 0.6
SMIM7-214ENST00000597711 IFT140Q96RY7 1462 aa18.74■□□□□ 0.59
SMIM7-214ENST00000597711 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
SMIM7-214ENST00000597711 EIF4G3O43432 1585 aaKnown RBP18.72■□□□□ 0.59
SMIM7-214ENST00000597711 CYB5RLQ6IPT4 315 aa18.72■□□□□ 0.59
SMIM7-214ENST00000597711 CHD1O14646 1710 aa18.69■□□□□ 0.58
SMIM7-214ENST00000597711 ARAP1Q96P48 1450 aa18.69■□□□□ 0.58
SMIM7-214ENST00000597711 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
SMIM7-214ENST00000597711 TRHP20396 242 aaPredicted RBP18.65■□□□□ 0.58
SMIM7-214ENST00000597711 CNKSR2Q8WXI2 1034 aa18.6■□□□□ 0.57
SMIM7-214ENST00000597711 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.57
SMIM7-214ENST00000597711 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.57
SMIM7-214ENST00000597711 TARBP1Q13395 1621 aaKnown RBP18.56■□□□□ 0.56
SMIM7-214ENST00000597711 DNMBPQ6XZF7 1577 aa18.55■□□□□ 0.56
SMIM7-214ENST00000597711 NPM3O75607 178 aaKnown RBP18.52■□□□□ 0.56
SMIM7-214ENST00000597711 FBLN2P98095 1184 aa18.51■□□□□ 0.55
SMIM7-214ENST00000597711 ABCC8Q09428 1581 aa18.48■□□□□ 0.55
SMIM7-214ENST00000597711 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.55
SMIM7-214ENST00000597711 RAD54L2Q9Y4B4 1467 aa18.44■□□□□ 0.54
SMIM7-214ENST00000597711 CLASP1Q7Z460 1538 aa18.44■□□□□ 0.54
SMIM7-214ENST00000597711 SNAPC4Q5SXM2 1469 aa18.4■□□□□ 0.54
SMIM7-214ENST00000597711 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
SMIM7-214ENST00000597711 TDRD9Q8NDG6 1382 aaKnown RBP18.39■□□□□ 0.53
SMIM7-214ENST00000597711 MAPK8IP2Q13387 824 aaPredicted RBP18.37■□□□□ 0.53
SMIM7-214ENST00000597711 SYNJ1O43426 1573 aa18.32■□□□□ 0.52
SMIM7-214ENST00000597711 SOGA1O94964 1423 aa18.32■□□□□ 0.52
SMIM7-214ENST00000597711 EHMT2Q96KQ7 1210 aa18.31■□□□□ 0.52
SMIM7-214ENST00000597711 FGD5Q6ZNL6 1462 aa18.29■□□□□ 0.52
SMIM7-214ENST00000597711 MAGI1Q96QZ7 1491 aaPredicted RBP18.26■□□□□ 0.51
SMIM7-214ENST00000597711 CHMP7Q8WUX9 453 aaPredicted RBP18.25■□□□□ 0.51
SMIM7-214ENST00000597711 WDR97A6NE52 1622 aa18.24■□□□□ 0.51
SMIM7-214ENST00000597711 GAPVD1Q14C86 1478 aa18.23■□□□□ 0.51
SMIM7-214ENST00000597711 CUX1P39880 1505 aa18.22■□□□□ 0.51
SMIM7-214ENST00000597711 SYNJ2O15056 1496 aa18.21■□□□□ 0.51
SMIM7-214ENST00000597711 GRIN2BQ13224 1484 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms