RNA–Protein interactions for RNA: ENST00000569718.5

TK2-220, Transcript of thymidine kinase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene TK2, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TK2-220ENST00000569718 NISCHQ9Y2I1 1504 aa21.12■□□□□ 0.97
TK2-220ENST00000569718 CCDC180Q9P1Z9 1646 aa18.96■□□□□ 0.63
TK2-220ENST00000569718 ABCC9O60706 1549 aa18.25■□□□□ 0.51
TK2-220ENST00000569718 NACADO15069 1562 aa17.74■□□□□ 0.43
TK2-220ENST00000569718 RB1CC1Q8TDY2 1594 aa17.74■□□□□ 0.43
TK2-220ENST00000569718 MYO15BQ96JP2 1530 aa17.74■□□□□ 0.43
TK2-220ENST00000569718 ZCCHC6Q5VYS8 1495 aaKnown RBP17.65■□□□□ 0.42
TK2-220ENST00000569718 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
TK2-220ENST00000569718 UNC13AQ9UPW8 1703 aa17.32■□□□□ 0.36
TK2-220ENST00000569718 DCAF8L2P0C7V8 631 aa17.28■□□□□ 0.36
TK2-220ENST00000569718 SHROOM4Q9ULL8 1493 aa17.21■□□□□ 0.35
TK2-220ENST00000569718 BICRAQ9NZM4 1560 aa17.15■□□□□ 0.34
TK2-220ENST00000569718 SCRIBQ14160 1630 aa17.08■□□□□ 0.32
TK2-220ENST00000569718 PABPN1Q86U42 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
TK2-220ENST00000569718 EIF4G1Q04637 1599 aaKnown RBP16.72■□□□□ 0.27
TK2-220ENST00000569718 DNAJC5BQ9UF47 199 aa16.62■□□□□ 0.25
TK2-220ENST00000569718 CC2D2AQ9P2K1 1620 aa16.61■□□□□ 0.25
TK2-220ENST00000569718 CECR2Q9BXF3 1484 aa16.48■□□□□ 0.23
TK2-220ENST00000569718 BAZ1AQ9NRL2 1556 aaPredicted RBP16.43■□□□□ 0.22
TK2-220ENST00000569718 SMARCA4P51532 1647 aa16.43■□□□□ 0.22
TK2-220ENST00000569718 SMARCA2P51531 1590 aa16.35■□□□□ 0.21
TK2-220ENST00000569718 PEG3Q9GZU2 1588 aa16.35■□□□□ 0.21
TK2-220ENST00000569718 HMGXB3Q12766 1538 aa16.33■□□□□ 0.2
TK2-220ENST00000569718 NCAPD3P42695 1498 aa16.31■□□□□ 0.2
TK2-220ENST00000569718 ATAD2BQ9ULI0 1458 aa16.28■□□□□ 0.2
TK2-220ENST00000569718 MROH2BQ7Z745 1585 aa16.21■□□□□ 0.18
TK2-220ENST00000569718 BAZ1BQ9UIG0 1483 aaKnown RBP16.16■□□□□ 0.18
TK2-220ENST00000569718 WIZO95785 1651 aa16.03■□□□□ 0.16
TK2-220ENST00000569718 RSF1Q96T23 1441 aaPredicted RBP16.02■□□□□ 0.15
TK2-220ENST00000569718 TOP2AP11388 1531 aaKnown RBP15.97■□□□□ 0.15
TK2-220ENST00000569718 LAMC3Q9Y6N6 1575 aa15.95■□□□□ 0.14
TK2-220ENST00000569718 ERCC6Q03468 1493 aa15.8■□□□□ 0.12
TK2-220ENST00000569718 NESP48681 1621 aa15.79■□□□□ 0.12
TK2-220ENST00000569718 CADPSQ9ULU8 1353 aa15.78■□□□□ 0.12
TK2-220ENST00000569718 CUX2O14529 1486 aa15.77■□□□□ 0.11
TK2-220ENST00000569718 PDS5BQ9NTI5 1447 aa15.77■□□□□ 0.11
TK2-220ENST00000569718 PRDM2Q13029 1718 aa15.75■□□□□ 0.11
TK2-220ENST00000569718 CFTRP13569 1480 aa15.74■□□□□ 0.11
TK2-220ENST00000569718 THOC2Q8NI27 1593 aaKnown RBP15.73■□□□□ 0.11
TK2-220ENST00000569718 KIF21AQ7Z4S6 1674 aa15.71■□□□□ 0.11
TK2-220ENST00000569718 CCDC88BA6NC98 1476 aa15.65■□□□□ 0.1
TK2-220ENST00000569718 CEP164Q9UPV0 1460 aa15.64■□□□□ 0.09
TK2-220ENST00000569718 MRC2Q9UBG0 1479 aa15.62■□□□□ 0.09
TK2-220ENST00000569718 WDR62O43379 1518 aa15.62■□□□□ 0.09
TK2-220ENST00000569718 FANCD2Q9BXW9 1451 aa15.61■□□□□ 0.09
TK2-220ENST00000569718 ABCC8Q09428 1581 aa15.45■□□□□ 0.06
TK2-220ENST00000569718 URB2Q14146 1524 aaKnown RBP15.44■□□□□ 0.06
TK2-220ENST00000569718 DNMBPQ6XZF7 1577 aa15.41■□□□□ 0.06
TK2-220ENST00000569718 AEBP2Q6ZN18 517 aaPredicted RBP15.38■□□□□ 0.05
TK2-220ENST00000569718 TOPBP1Q92547 1522 aa15.38■□□□□ 0.05
TK2-220ENST00000569718 SUPT5HO00267 1087 aaKnown RBP15.36■□□□□ 0.05
TK2-220ENST00000569718 IFT140Q96RY7 1462 aa15.31■□□□□ 0.04
TK2-220ENST00000569718 WDR97A6NE52 1622 aa15.29■□□□□ 0.04
TK2-220ENST00000569718 TARBP1Q13395 1621 aaKnown RBP15.25■□□□□ 0.03
TK2-220ENST00000569718 POLA1P09884 1462 aaPredicted RBP15.25■□□□□ 0.03
TK2-220ENST00000569718 CUX1P39880 1505 aa15.23■□□□□ 0.03
TK2-220ENST00000569718 BIVM-ERCC5R4GMW8 1640 aa15.21■□□□□ 0.02
TK2-220ENST00000569718 EIF4G3O43432 1585 aaKnown RBP15.2■□□□□ 0.02
TK2-220ENST00000569718 TOP2BQ02880 1626 aa15.18■□□□□ 0.02
TK2-220ENST00000569718 FGD5Q6ZNL6 1462 aa15.18■□□□□ 0.02
TK2-220ENST00000569718 ZNF608Q9ULD9 1512 aaPredicted RBP15.13■□□□□ 0.01
TK2-220ENST00000569718 WRNQ14191 1432 aaPredicted RBP eCLIP15.13■□□□□ 0.01
TK2-220ENST00000569718 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
TK2-220ENST00000569718 SOGA1O94964 1423 aa15.1■□□□□ 0.01
TK2-220ENST00000569718 ABCA10Q8WWZ4 1543 aa15.1■□□□□ 0.01
TK2-220ENST00000569718 DNAJC5Q9H3Z4 198 aa15.09■□□□□ 0.01
TK2-220ENST00000569718 ABCA5Q8WWZ7 1642 aa15.08■□□□□ 0
TK2-220ENST00000569718 CHIC1Q5VXU3 224 aa15.07■□□□□ 0
TK2-220ENST00000569718 RAD54L2Q9Y4B4 1467 aa15.06■□□□□ 0
TK2-220ENST00000569718 MAGI1Q96QZ7 1491 aaPredicted RBP15.04■□□□□ -0
TK2-220ENST00000569718 PBRM1Q86U86 1689 aa15.03■□□□□ -0
TK2-220ENST00000569718 GRIN2BQ13224 1484 aa15.02■□□□□ -0
TK2-220ENST00000569718 AQRO60306 1485 aaKnown RBP eCLIP15.01□□□□□ -0.012e-9■■■■■ 39.4
TK2-220ENST00000569718 GAPVD1Q14C86 1478 aa14.99□□□□□ -0.01
TK2-220ENST00000569718 CHD1O14646 1710 aa14.98□□□□□ -0.01
TK2-220ENST00000569718 SNAPC4Q5SXM2 1469 aa14.96□□□□□ -0.01
TK2-220ENST00000569718 ERICH3Q5RHP9 1530 aa14.96□□□□□ -0.02
TK2-220ENST00000569718 TDRD9Q8NDG6 1382 aaKnown RBP14.96□□□□□ -0.02
TK2-220ENST00000569718 SYNJ2O15056 1496 aa14.94□□□□□ -0.02
TK2-220ENST00000569718 ADAMTS12P58397 1594 aa14.93□□□□□ -0.02
TK2-220ENST00000569718 OSCARQ8IYS5 282 aa14.9□□□□□ -0.02
TK2-220ENST00000569718 CLASP1Q7Z460 1538 aa14.87□□□□□ -0.03
TK2-220ENST00000569718 CUL7Q14999 1698 aa14.85□□□□□ -0.03
TK2-220ENST00000569718 FHAD1B1AJZ9 1412 aa14.83□□□□□ -0.03
TK2-220ENST00000569718 GRIN2AQ12879 1464 aa14.83□□□□□ -0.03
TK2-220ENST00000569718 KIF27Q86VH2 1401 aa14.83□□□□□ -0.04
TK2-220ENST00000569718 ARHGEF11O15085 1522 aa14.79□□□□□ -0.04
TK2-220ENST00000569718 RIMBP3CA6NJZ7 1639 aa14.78□□□□□ -0.04
TK2-220ENST00000569718 RIMBP3BA6NNM3 1639 aa14.78□□□□□ -0.04
TK2-220ENST00000569718 RIMBP3Q9UFD9 1639 aa14.78□□□□□ -0.04
TK2-220ENST00000569718 NUP160Q12769 1436 aa14.78□□□□□ -0.04
TK2-220ENST00000569718 CHMP7Q8WUX9 453 aaPredicted RBP14.76□□□□□ -0.05
TK2-220ENST00000569718 CEP170Q5SW79 1584 aa14.74□□□□□ -0.05
TK2-220ENST00000569718 SHROOM2Q13796 1616 aa14.73□□□□□ -0.05
TK2-220ENST00000569718 RUSC2Q8N2Y8 1516 aa14.72□□□□□ -0.05
TK2-220ENST00000569718 FBLN2P98095 1184 aa14.71□□□□□ -0.05
TK2-220ENST00000569718 IGF1RP08069 1367 aa14.69□□□□□ -0.06
TK2-220ENST00000569718 ARAP1Q96P48 1450 aa14.65□□□□□ -0.06
TK2-220ENST00000569718 KIAA0586Q9BVV6 1533 aa14.62□□□□□ -0.07
TK2-220ENST00000569718 EEA1Q15075 1411 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms