RNA–Protein interactions for RNA: ENST00000554649.1

AC087633.1-201, humanhuman

TSL 3 BASIC

Gene AC087633.1, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087633.1-201ENST00000554649 AEBP2Q6ZN18 517 aaPredicted RBP24.41■■□□□ 1.5
AC087633.1-201ENST00000554649 CHIC1Q5VXU3 224 aa23.85■■□□□ 1.41
AC087633.1-201ENST00000554649 NISCHQ9Y2I1 1504 aa21.22■□□□□ 0.99
AC087633.1-201ENST00000554649 PHF23Q9BUL5 403 aaPredicted RBP20.97■□□□□ 0.95
AC087633.1-201ENST00000554649 SENP3Q9H4L4 574 aaPredicted RBP20.71■□□□□ 0.91
AC087633.1-201ENST00000554649 ABCC9O60706 1549 aa19.97■□□□□ 0.79
AC087633.1-201ENST00000554649 CCDC180Q9P1Z9 1646 aa19.46■□□□□ 0.71
AC087633.1-201ENST00000554649 PLPPR3Q6T4P5 718 aa19.34■□□□□ 0.69
AC087633.1-201ENST00000554649 DNAJC5BQ9UF47 199 aa19.27■□□□□ 0.68
AC087633.1-201ENST00000554649 FOXD1Q16676 465 aa19.21■□□□□ 0.67
AC087633.1-201ENST00000554649 RB1CC1Q8TDY2 1594 aa18.79■□□□□ 0.6
AC087633.1-201ENST00000554649 NACADO15069 1562 aa18.49■□□□□ 0.55
AC087633.1-201ENST00000554649 PPP6R1Q9UPN7 881 aa18.48■□□□□ 0.55
AC087633.1-201ENST00000554649 UNC13AQ9UPW8 1703 aa18.42■□□□□ 0.54
AC087633.1-201ENST00000554649 ADRA2BP18089 450 aa18.41■□□□□ 0.54
AC087633.1-201ENST00000554649 PABPN1Q86U42 306 aaKnown RBP eCLIP18.39■□□□□ 0.53
AC087633.1-201ENST00000554649 BICRAQ9NZM4 1560 aa18.26■□□□□ 0.51
AC087633.1-201ENST00000554649 DNAJC5Q9H3Z4 198 aa18.23■□□□□ 0.51
AC087633.1-201ENST00000554649 CECR2Q9BXF3 1484 aa18.08■□□□□ 0.49
AC087633.1-201ENST00000554649 PIAS4Q8N2W9 510 aaPredicted RBP18.07■□□□□ 0.48
AC087633.1-201ENST00000554649 CC2D2AQ9P2K1 1620 aa18.07■□□□□ 0.48
AC087633.1-201ENST00000554649 MYO15BQ96JP2 1530 aa18.03■□□□□ 0.48
AC087633.1-201ENST00000554649 SHROOM4Q9ULL8 1493 aa18.01■□□□□ 0.47
AC087633.1-201ENST00000554649 DCAF8L2P0C7V8 631 aa18■□□□□ 0.47
AC087633.1-201ENST00000554649 EIF4G1Q04637 1599 aaKnown RBP17.87■□□□□ 0.45
AC087633.1-201ENST00000554649 MSH5O43196 834 aa17.73■□□□□ 0.43
AC087633.1-201ENST00000554649 SCRIBQ14160 1630 aa17.59■□□□□ 0.41
AC087633.1-201ENST00000554649 CUX2O14529 1486 aa17.57■□□□□ 0.4
AC087633.1-201ENST00000554649 DCAF1Q9Y4B6 1507 aa17.54■□□□□ 0.4
AC087633.1-201ENST00000554649 ZCCHC6Q5VYS8 1495 aaKnown RBP17.47■□□□□ 0.39
AC087633.1-201ENST00000554649 ERCC6Q03468 1493 aa17.31■□□□□ 0.36
AC087633.1-201ENST00000554649 TRIM41Q8WV44 630 aa17.1■□□□□ 0.33
AC087633.1-201ENST00000554649 THOC2Q8NI27 1593 aaKnown RBP17.04■□□□□ 0.32
AC087633.1-201ENST00000554649 NCAPD3P42695 1498 aa17.03■□□□□ 0.32
AC087633.1-201ENST00000554649 PPP4R3CPQ6ZMV5 832 aa17.02■□□□□ 0.32
AC087633.1-201ENST00000554649 NESP48681 1621 aa16.96■□□□□ 0.31
AC087633.1-201ENST00000554649 HMGXB3Q12766 1538 aa16.91■□□□□ 0.3
AC087633.1-201ENST00000554649 ATAD2BQ9ULI0 1458 aa16.88■□□□□ 0.29
AC087633.1-201ENST00000554649 SCAF1Q9H7N4 1312 aaKnown RBP16.88■□□□□ 0.29
AC087633.1-201ENST00000554649 SMARCA2P51531 1590 aa16.84■□□□□ 0.29
AC087633.1-201ENST00000554649 LAMC3Q9Y6N6 1575 aa16.82■□□□□ 0.28
AC087633.1-201ENST00000554649 KIF21AQ7Z4S6 1674 aa16.81■□□□□ 0.28
AC087633.1-201ENST00000554649 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
AC087633.1-201ENST00000554649 BAZ1AQ9NRL2 1556 aaPredicted RBP16.72■□□□□ 0.27
AC087633.1-201ENST00000554649 KCNA4P22459 653 aa16.72■□□□□ 0.27
AC087633.1-201ENST00000554649 MAPK8IP2Q13387 824 aaPredicted RBP16.71■□□□□ 0.27
AC087633.1-201ENST00000554649 BAZ1BQ9UIG0 1483 aaKnown RBP16.68■□□□□ 0.26
AC087633.1-201ENST00000554649 PDS5BQ9NTI5 1447 aa16.68■□□□□ 0.26
AC087633.1-201ENST00000554649 WDR62O43379 1518 aa16.62■□□□□ 0.25
AC087633.1-201ENST00000554649 PEG3Q9GZU2 1588 aa16.61■□□□□ 0.25
AC087633.1-201ENST00000554649 MRC2Q9UBG0 1479 aa16.61■□□□□ 0.25
AC087633.1-201ENST00000554649 CNKSR2Q8WXI2 1034 aa16.57■□□□□ 0.24
AC087633.1-201ENST00000554649 NCBP3Q53F19 620 aaKnown RBP16.56■□□□□ 0.24
AC087633.1-201ENST00000554649 POTEDQ86YR6 584 aa16.56■□□□□ 0.24
AC087633.1-201ENST00000554649 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
AC087633.1-201ENST00000554649 DMRT2Q9Y5R5 561 aa16.55■□□□□ 0.24
AC087633.1-201ENST00000554649 OSCARQ8IYS5 282 aa16.52■□□□□ 0.24
AC087633.1-201ENST00000554649 RIMBP3CA6NJZ7 1639 aa16.52■□□□□ 0.23
AC087633.1-201ENST00000554649 RIMBP3BA6NNM3 1639 aa16.52■□□□□ 0.23
AC087633.1-201ENST00000554649 RIMBP3Q9UFD9 1639 aa16.52■□□□□ 0.23
AC087633.1-201ENST00000554649 CADPSQ9ULU8 1353 aa16.44■□□□□ 0.22
AC087633.1-201ENST00000554649 CEP164Q9UPV0 1460 aa16.4■□□□□ 0.22
AC087633.1-201ENST00000554649 ARHGEF11O15085 1522 aa16.38■□□□□ 0.21
AC087633.1-201ENST00000554649 NPM3O75607 178 aaKnown RBP16.35■□□□□ 0.21
AC087633.1-201ENST00000554649 MROH2BQ7Z745 1585 aa16.32■□□□□ 0.2
AC087633.1-201ENST00000554649 FANCD2Q9BXW9 1451 aa16.29■□□□□ 0.2
AC087633.1-201ENST00000554649 RNF216Q9NWF9 866 aaPredicted RBP16.27■□□□□ 0.2
AC087633.1-201ENST00000554649 HOXD11P31277 338 aaPredicted RBP16.23■□□□□ 0.19
AC087633.1-201ENST00000554649 URB2Q14146 1524 aaKnown RBP16.22■□□□□ 0.19
AC087633.1-201ENST00000554649 TRHP20396 242 aaPredicted RBP16.2■□□□□ 0.18
AC087633.1-201ENST00000554649 CFTRP13569 1480 aa16.16■□□□□ 0.18
AC087633.1-201ENST00000554649 ARAP1Q96P48 1450 aa16.16■□□□□ 0.18
AC087633.1-201ENST00000554649 CYB5RLQ6IPT4 315 aa16.15■□□□□ 0.18
AC087633.1-201ENST00000554649 WIZO95785 1651 aa16.11■□□□□ 0.17
AC087633.1-201ENST00000554649 ZNF608Q9ULD9 1512 aaPredicted RBP16.1■□□□□ 0.17
AC087633.1-201ENST00000554649 IFT140Q96RY7 1462 aa16.09■□□□□ 0.17
AC087633.1-201ENST00000554649 SLC4A1APQ9BWU0 796 aaKnown RBP16.08■□□□□ 0.16
AC087633.1-201ENST00000554649 CHD1O14646 1710 aa16.08■□□□□ 0.16
AC087633.1-201ENST00000554649 EIF4G3O43432 1585 aaKnown RBP16.07■□□□□ 0.16
AC087633.1-201ENST00000554649 PRDM2Q13029 1718 aa16.07■□□□□ 0.16
AC087633.1-201ENST00000554649 RSF1Q96T23 1441 aaPredicted RBP16.05■□□□□ 0.16
AC087633.1-201ENST00000554649 CSRNP3Q8WYN3 585 aa15.97■□□□□ 0.15
AC087633.1-201ENST00000554649 TOPBP1Q92547 1522 aa15.92■□□□□ 0.14
AC087633.1-201ENST00000554649 TOP2AP11388 1531 aaKnown RBP15.89■□□□□ 0.13
AC087633.1-201ENST00000554649 TARBP1Q13395 1621 aaKnown RBP15.87■□□□□ 0.13
AC087633.1-201ENST00000554649 CLASP1Q7Z460 1538 aa15.87■□□□□ 0.13
AC087633.1-201ENST00000554649 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
AC087633.1-201ENST00000554649 DNMBPQ6XZF7 1577 aa15.83■□□□□ 0.13
AC087633.1-201ENST00000554649 AQRO60306 1485 aaKnown RBP eCLIP15.83■□□□□ 0.12
AC087633.1-201ENST00000554649 FBLN2P98095 1184 aa15.79■□□□□ 0.12
AC087633.1-201ENST00000554649 SYNJ1O43426 1573 aa15.79■□□□□ 0.12
AC087633.1-201ENST00000554649 WDR97A6NE52 1622 aa15.72■□□□□ 0.11
AC087633.1-201ENST00000554649 POLA1P09884 1462 aaPredicted RBP15.71■□□□□ 0.11
AC087633.1-201ENST00000554649 SNAPC4Q5SXM2 1469 aa15.71■□□□□ 0.1
AC087633.1-201ENST00000554649 GAPVD1Q14C86 1478 aa15.69■□□□□ 0.1
AC087633.1-201ENST00000554649 DCAF8L1A6NGE4 600 aa15.67■□□□□ 0.1
AC087633.1-201ENST00000554649 ILDR1Q86SU0 546 aaPredicted RBP15.67■□□□□ 0.1
AC087633.1-201ENST00000554649 MAGI1Q96QZ7 1491 aaPredicted RBP15.66■□□□□ 0.1
AC087633.1-201ENST00000554649 CCDC88BA6NC98 1476 aa15.65■□□□□ 0.1
AC087633.1-201ENST00000554649 KIF13AQ9H1H9 1805 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms