RNA–Protein interactions for RNA: ENST00000543225.5

CCAR1-214, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 1 (best)

Gene CCAR1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-214ENST00000543225 NISCHQ9Y2I1 1504 aa14.26□□□□□ -0.13
CCAR1-214ENST00000543225 AEBP2Q6ZN18 517 aaPredicted RBP12.96□□□□□ -0.34
CCAR1-214ENST00000543225 ABCC9O60706 1549 aa12.88□□□□□ -0.35
CCAR1-214ENST00000543225 CCDC180Q9P1Z9 1646 aa12.86□□□□□ -0.35
CCAR1-214ENST00000543225 CHIC1Q5VXU3 224 aa12.56□□□□□ -0.4
CCAR1-214ENST00000543225 DNAJC5BQ9UF47 199 aa12.29□□□□□ -0.44
CCAR1-214ENST00000543225 RB1CC1Q8TDY2 1594 aa12.26□□□□□ -0.45
CCAR1-214ENST00000543225 NACADO15069 1562 aa12.15□□□□□ -0.46
CCAR1-214ENST00000543225 DCAF8L2P0C7V8 631 aa12.07□□□□□ -0.48
CCAR1-214ENST00000543225 UNC13AQ9UPW8 1703 aa12.04□□□□□ -0.48
CCAR1-214ENST00000543225 PABPN1Q86U42 306 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCAR1-214ENST00000543225 MYO15BQ96JP2 1530 aa11.96□□□□□ -0.5
CCAR1-214ENST00000543225 BICRAQ9NZM4 1560 aa11.89□□□□□ -0.51
CCAR1-214ENST00000543225 ZCCHC6Q5VYS8 1495 aaKnown RBP11.8□□□□□ -0.52
CCAR1-214ENST00000543225 DCAF1Q9Y4B6 1507 aa11.78□□□□□ -0.52
CCAR1-214ENST00000543225 SHROOM4Q9ULL8 1493 aa11.73□□□□□ -0.53
CCAR1-214ENST00000543225 SCRIBQ14160 1630 aa11.7□□□□□ -0.54
CCAR1-214ENST00000543225 CC2D2AQ9P2K1 1620 aa11.65□□□□□ -0.54
CCAR1-214ENST00000543225 EIF4G1Q04637 1599 aaKnown RBP11.61□□□□□ -0.55
CCAR1-214ENST00000543225 CECR2Q9BXF3 1484 aa11.61□□□□□ -0.55
CCAR1-214ENST00000543225 HRCP23327 699 aa11.46□□□□□ -0.57
CCAR1-214ENST00000543225 PELP1Q8IZL8 1130 aaKnown RBP11.37□□□□□ -0.59
CCAR1-214ENST00000543225 DNAJC5Q9H3Z4 198 aa11.36□□□□□ -0.59
CCAR1-214ENST00000543225 NCAPD3P42695 1498 aa11.2□□□□□ -0.62
CCAR1-214ENST00000543225 PPARGC1BQ86YN6 1023 aaKnown RBP11.18□□□□□ -0.62
CCAR1-214ENST00000543225 ATAD2BQ9ULI0 1458 aa11.16□□□□□ -0.62
CCAR1-214ENST00000543225 SMARCA4P51532 1647 aa11.15□□□□□ -0.62
CCAR1-214ENST00000543225 SMARCA2P51531 1590 aa11.15□□□□□ -0.62
CCAR1-214ENST00000543225 ERCC6Q03468 1493 aa11.13□□□□□ -0.63
CCAR1-214ENST00000543225 CUX2O14529 1486 aa11.13□□□□□ -0.63
CCAR1-214ENST00000543225 HMGXB3Q12766 1538 aa11.13□□□□□ -0.63
CCAR1-214ENST00000543225 PCGF6Q9BYE7 350 aa11.1□□□□□ -0.63
CCAR1-214ENST00000543225 BAZ1AQ9NRL2 1556 aaPredicted RBP11.09□□□□□ -0.63
CCAR1-214ENST00000543225 BAZ1BQ9UIG0 1483 aaKnown RBP11.06□□□□□ -0.64
CCAR1-214ENST00000543225 NESP48681 1621 aa11.05□□□□□ -0.64
CCAR1-214ENST00000543225 PHF23Q9BUL5 403 aaPredicted RBP11.05□□□□□ -0.64
CCAR1-214ENST00000543225 PEG3Q9GZU2 1588 aa11.05□□□□□ -0.64
CCAR1-214ENST00000543225 MYT1Q01538 1121 aa11□□□□□ -0.65
CCAR1-214ENST00000543225 MROH2BQ7Z745 1585 aa10.99□□□□□ -0.65
CCAR1-214ENST00000543225 LAMC3Q9Y6N6 1575 aa10.99□□□□□ -0.65
CCAR1-214ENST00000543225 SENP3Q9H4L4 574 aaPredicted RBP10.98□□□□□ -0.65
CCAR1-214ENST00000543225 THOC2Q8NI27 1593 aaKnown RBP10.96□□□□□ -0.65
CCAR1-214ENST00000543225 KIF21AQ7Z4S6 1674 aa10.95□□□□□ -0.66
CCAR1-214ENST00000543225 SCAF1Q9H7N4 1312 aaKnown RBP10.93□□□□□ -0.66
CCAR1-214ENST00000543225 SUPT5HO00267 1087 aaKnown RBP10.92□□□□□ -0.66
CCAR1-214ENST00000543225 PDS5BQ9NTI5 1447 aa10.91□□□□□ -0.66
CCAR1-214ENST00000543225 TRIM41Q8WV44 630 aa10.9□□□□□ -0.66
CCAR1-214ENST00000543225 WIZO95785 1651 aa10.88□□□□□ -0.67
CCAR1-214ENST00000543225 CADPSQ9ULU8 1353 aa10.85□□□□□ -0.67
CCAR1-214ENST00000543225 MRC2Q9UBG0 1479 aa10.81□□□□□ -0.68
CCAR1-214ENST00000543225 WDR62O43379 1518 aa10.79□□□□□ -0.68
CCAR1-214ENST00000543225 CEP164Q9UPV0 1460 aa10.77□□□□□ -0.69
CCAR1-214ENST00000543225 FANCD2Q9BXW9 1451 aa10.74□□□□□ -0.69
CCAR1-214ENST00000543225 ZEB1P37275 1124 aaPredicted RBP10.73□□□□□ -0.69
CCAR1-214ENST00000543225 TRIM26Q12899 539 aaPredicted RBP10.73□□□□□ -0.69
CCAR1-214ENST00000543225 TTBK1Q5TCY1 1321 aaPredicted RBP10.73□□□□□ -0.69
CCAR1-214ENST00000543225 RSF1Q96T23 1441 aaPredicted RBP10.73□□□□□ -0.69
CCAR1-214ENST00000543225 CFTRP13569 1480 aa10.72□□□□□ -0.69
CCAR1-214ENST00000543225 TOP2AP11388 1531 aaKnown RBP10.71□□□□□ -0.69
CCAR1-214ENST00000543225 PRDM2Q13029 1718 aa10.69□□□□□ -0.7
CCAR1-214ENST00000543225 URB2Q14146 1524 aaKnown RBP10.65□□□□□ -0.7
CCAR1-214ENST00000543225 ACIN1Q9UKV3 1341 aaKnown RBP10.62□□□□□ -0.71
CCAR1-214ENST00000543225 OSCARQ8IYS5 282 aa10.61□□□□□ -0.71
CCAR1-214ENST00000543225 LOC105371045A0A1W2PR82 267 aa10.6□□□□□ -0.71
CCAR1-214ENST00000543225 CCDC88BA6NC98 1476 aa10.59□□□□□ -0.71
CCAR1-214ENST00000543225 NEUROD1Q13562 356 aa10.57□□□□□ -0.72
CCAR1-214ENST00000543225 IFT140Q96RY7 1462 aa10.54□□□□□ -0.72
CCAR1-214ENST00000543225 TOPBP1Q92547 1522 aa10.53□□□□□ -0.72
CCAR1-214ENST00000543225 ZNF608Q9ULD9 1512 aaPredicted RBP10.53□□□□□ -0.72
CCAR1-214ENST00000543225 GTF3C3Q9Y5Q9 886 aa10.53□□□□□ -0.72
CCAR1-214ENST00000543225 ABCC8Q09428 1581 aa10.52□□□□□ -0.73
CCAR1-214ENST00000543225 DNMBPQ6XZF7 1577 aa10.5□□□□□ -0.73
CCAR1-214ENST00000543225 RIMBP3CA6NJZ7 1639 aa10.5□□□□□ -0.73
CCAR1-214ENST00000543225 RIMBP3BA6NNM3 1639 aa10.5□□□□□ -0.73
CCAR1-214ENST00000543225 RIMBP3Q9UFD9 1639 aa10.5□□□□□ -0.73
CCAR1-214ENST00000543225 EIF4G3O43432 1585 aaKnown RBP10.5□□□□□ -0.73
CCAR1-214ENST00000543225 CENPBP07199 599 aaPredicted RBP10.46□□□□□ -0.74
CCAR1-214ENST00000543225 TARBP1Q13395 1621 aaKnown RBP10.46□□□□□ -0.74
CCAR1-214ENST00000543225 CHD1O14646 1710 aa10.45□□□□□ -0.74
CCAR1-214ENST00000543225 ARHGEF11O15085 1522 aa10.45□□□□□ -0.74
CCAR1-214ENST00000543225 CYB5RLQ6IPT4 315 aa10.43□□□□□ -0.74
CCAR1-214ENST00000543225 AQRO60306 1485 aaKnown RBP eCLIP10.43□□□□□ -0.747e-7■■■■■ 27.3
CCAR1-214ENST00000543225 POLA1P09884 1462 aaPredicted RBP10.42□□□□□ -0.74
CCAR1-214ENST00000543225 TRHP20396 242 aaPredicted RBP10.39□□□□□ -0.75
CCAR1-214ENST00000543225 FBLN2P98095 1184 aa10.38□□□□□ -0.75
CCAR1-214ENST00000543225 RAD54L2Q9Y4B4 1467 aa10.38□□□□□ -0.75
CCAR1-214ENST00000543225 SOGA1O94964 1423 aa10.37□□□□□ -0.75
CCAR1-214ENST00000543225 TDRD9Q8NDG6 1382 aaKnown RBP10.36□□□□□ -0.75
CCAR1-214ENST00000543225 WDR97A6NE52 1622 aa10.35□□□□□ -0.75
CCAR1-214ENST00000543225 FGD5Q6ZNL6 1462 aa10.35□□□□□ -0.75
CCAR1-214ENST00000543225 DIEXFQ68CQ4 756 aaKnown RBP10.33□□□□□ -0.76
CCAR1-214ENST00000543225 ARAP1Q96P48 1450 aa10.33□□□□□ -0.76
CCAR1-214ENST00000543225 CUX1P39880 1505 aa10.33□□□□□ -0.76
CCAR1-214ENST00000543225 SNAPC4Q5SXM2 1469 aa10.32□□□□□ -0.76
CCAR1-214ENST00000543225 MAGI1Q96QZ7 1491 aaPredicted RBP10.3□□□□□ -0.76
CCAR1-214ENST00000543225 SYNJ1O43426 1573 aa10.3□□□□□ -0.76
CCAR1-214ENST00000543225 PBRM1Q86U86 1689 aa10.29□□□□□ -0.76
CCAR1-214ENST00000543225 CHMP7Q8WUX9 453 aaPredicted RBP10.29□□□□□ -0.76
CCAR1-214ENST00000543225 CLASP1Q7Z460 1538 aa10.29□□□□□ -0.76
CCAR1-214ENST00000543225 GRIN2BQ13224 1484 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms