RNA–Protein interactions for RNA: ENST00000535889.5

MTR-205, Transcript of 5-methyltetrahydrofolate-homocysteine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene MTR, Length 10,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTR-205ENST00000535889 NISCHQ9Y2I1 1504 aa19.68■□□□□ 0.74
MTR-205ENST00000535889 DCAF8L2P0C7V8 631 aa18.16■□□□□ 0.5
MTR-205ENST00000535889 SUPT5HO00267 1087 aaKnown RBP17.53■□□□□ 0.4
MTR-205ENST00000535889 PELP1Q8IZL8 1130 aaKnown RBP17.29■□□□□ 0.36
MTR-205ENST00000535889 SHROOM4Q9ULL8 1493 aa17.27■□□□□ 0.35
MTR-205ENST00000535889 FAM9AQ8IZU1 332 aaPredicted RBP17.16■□□□□ 0.34
MTR-205ENST00000535889 APLP2Q06481 763 aa17.13■□□□□ 0.33
MTR-205ENST00000535889 CCDC180Q9P1Z9 1646 aa17.13■□□□□ 0.33
MTR-205ENST00000535889 ZEB1P37275 1124 aaPredicted RBP17.1■□□□□ 0.33
MTR-205ENST00000535889 TRIM41Q8WV44 630 aa16.73■□□□□ 0.27
MTR-205ENST00000535889 CENPBP07199 599 aaPredicted RBP16.6■□□□□ 0.25
MTR-205ENST00000535889 MYT1Q01538 1121 aa16.47■□□□□ 0.23
MTR-205ENST00000535889 ZCCHC6Q5VYS8 1495 aaKnown RBP16.45■□□□□ 0.22
MTR-205ENST00000535889 CCER1Q8TC90 406 aaPredicted RBP16.44■□□□□ 0.22
MTR-205ENST00000535889 PCGF6Q9BYE7 350 aa16.42■□□□□ 0.22
MTR-205ENST00000535889 TRIM26Q12899 539 aaPredicted RBP16.38■□□□□ 0.21
MTR-205ENST00000535889 UBTFP17480 764 aaKnown RBP16.32■□□□□ 0.2
MTR-205ENST00000535889 DCAF1Q9Y4B6 1507 aa16.22■□□□□ 0.19
MTR-205ENST00000535889 CHIC1Q5VXU3 224 aa16.13■□□□□ 0.17
MTR-205ENST00000535889 NACADO15069 1562 aa16.12■□□□□ 0.17
MTR-205ENST00000535889 RB1CC1Q8TDY2 1594 aa16.09■□□□□ 0.17
MTR-205ENST00000535889 NEFLP07196 543 aa16.08■□□□□ 0.17
MTR-205ENST00000535889 EHMT2Q96KQ7 1210 aa16.06■□□□□ 0.16
MTR-205ENST00000535889 HRCP23327 699 aa16.03■□□□□ 0.16
MTR-205ENST00000535889 ABCC9O60706 1549 aa15.98■□□□□ 0.15
MTR-205ENST00000535889 SCRIBQ14160 1630 aa15.94■□□□□ 0.14
MTR-205ENST00000535889 MYO15BQ96JP2 1530 aa15.91■□□□□ 0.14
MTR-205ENST00000535889 ERICH6Q7L0X2 663 aa15.89■□□□□ 0.13
MTR-205ENST00000535889 EEA1Q15075 1411 aa15.84■□□□□ 0.13
MTR-205ENST00000535889 ATP1B4Q9UN42 357 aaPredicted RBP15.82■□□□□ 0.12
MTR-205ENST00000535889 ACIN1Q9UKV3 1341 aaKnown RBP15.82■□□□□ 0.12
MTR-205ENST00000535889 CLSPNQ9HAW4 1339 aa15.79■□□□□ 0.12
MTR-205ENST00000535889 BAZ1AQ9NRL2 1556 aaPredicted RBP15.7■□□□□ 0.1
MTR-205ENST00000535889 TTBK1Q5TCY1 1321 aaPredicted RBP15.7■□□□□ 0.1
MTR-205ENST00000535889 RANGAP1P46060 587 aaPredicted RBP15.68■□□□□ 0.1
MTR-205ENST00000535889 YTHDC1Q96MU7 727 aaKnown RBP15.63■□□□□ 0.09
MTR-205ENST00000535889 CSRNP3Q8WYN3 585 aa15.53■□□□□ 0.08
MTR-205ENST00000535889 LOC105371045A0A1W2PR82 267 aa15.52■□□□□ 0.07
MTR-205ENST00000535889 DIEXFQ68CQ4 756 aaKnown RBP15.5■□□□□ 0.07
MTR-205ENST00000535889 CDK11AQ9UQ88 783 aaPredicted RBP15.5■□□□□ 0.07
MTR-205ENST00000535889 DAXXQ9UER7 740 aaPredicted RBP15.49■□□□□ 0.07
MTR-205ENST00000535889 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.47■□□□□ 0.07
MTR-205ENST00000535889 HNRNPUL2Q1KMD3 747 aaKnown RBP15.47■□□□□ 0.07
MTR-205ENST00000535889 GOLGA3Q08378 1498 aa15.43■□□□□ 0.06
MTR-205ENST00000535889 SMARCA2P51531 1590 aa15.41■□□□□ 0.06
MTR-205ENST00000535889 RSF1Q96T23 1441 aaPredicted RBP15.4■□□□□ 0.06
MTR-205ENST00000535889 BAZ1BQ9UIG0 1483 aaKnown RBP15.4■□□□□ 0.06
MTR-205ENST00000535889 CEP164Q9UPV0 1460 aa15.37■□□□□ 0.05
MTR-205ENST00000535889 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.05
MTR-205ENST00000535889 FAM50AQ14320 339 aaKnown RBP15.31■□□□□ 0.04
MTR-205ENST00000535889 ANP32CO43423 234 aa15.31■□□□□ 0.04
MTR-205ENST00000535889 ZNF316A6NFI3 1004 aaPredicted RBP15.31■□□□□ 0.04
MTR-205ENST00000535889 ITGAEP38570 1179 aa15.3■□□□□ 0.04
MTR-205ENST00000535889 CLIP1P30622 1438 aa15.27■□□□□ 0.03
MTR-205ENST00000535889 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
MTR-205ENST00000535889 KIF27Q86VH2 1401 aa15.26■□□□□ 0.03
MTR-205ENST00000535889 MYT1LQ9UL68 1186 aa15.24■□□□□ 0.03
MTR-205ENST00000535889 PPARGC1BQ86YN6 1023 aaKnown RBP15.22■□□□□ 0.03
MTR-205ENST00000535889 TNIKQ9UKE5 1360 aa15.21■□□□□ 0.03
MTR-205ENST00000535889 FHAD1B1AJZ9 1412 aa15.2■□□□□ 0.02
MTR-205ENST00000535889 TOP2AP11388 1531 aaKnown RBP15.2■□□□□ 0.02
MTR-205ENST00000535889 RTL5Q5HYW3 569 aaPredicted RBP15.17■□□□□ 0.02
MTR-205ENST00000535889 TRIM52Q96A61 297 aa15.17■□□□□ 0.02
MTR-205ENST00000535889 TONSLQ96HA7 1378 aa15.16■□□□□ 0.02
MTR-205ENST00000535889 CEP162Q5TB80 1403 aa15.14■□□□□ 0.01
MTR-205ENST00000535889 SMARCA4P51532 1647 aa15.07■□□□□ 0
MTR-205ENST00000535889 MTUS2Q5JR59 1369 aa15.07■□□□□ 0
MTR-205ENST00000535889 NEFMP07197 916 aa15.06■□□□□ 0
MTR-205ENST00000535889 TIMELESSQ9UNS1 1208 aa15.03■□□□□ -0
MTR-205ENST00000535889 SLC24A1O60721 1099 aa15.02■□□□□ -0
MTR-205ENST00000535889 POLR3GLQ9BT43 218 aa15.01□□□□□ -0.01
MTR-205ENST00000535889 ABCC8Q09428 1581 aa14.97□□□□□ -0.01
MTR-205ENST00000535889 ZBTB47Q9UFB7 747 aaPredicted RBP14.96□□□□□ -0.01
MTR-205ENST00000535889 NEUROD1Q13562 356 aa14.95□□□□□ -0.02
MTR-205ENST00000535889 VPS8Q8N3P4 1428 aa14.92□□□□□ -0.02
MTR-205ENST00000535889 MROH2BQ7Z745 1585 aa14.91□□□□□ -0.02
MTR-205ENST00000535889 EIF5BO60841 1220 aaKnown RBP14.9□□□□□ -0.02
MTR-205ENST00000535889 WIZO95785 1651 aa14.9□□□□□ -0.02
MTR-205ENST00000535889 FMN1Q68DA7 1419 aa14.89□□□□□ -0.03
MTR-205ENST00000535889 ANP32AP39687 249 aaKnown RBP14.88□□□□□ -0.03
MTR-205ENST00000535889 TSPY4P0CV99 314 aa14.88□□□□□ -0.03
MTR-205ENST00000535889 TSPY10P0CW01 314 aa14.88□□□□□ -0.03
MTR-205ENST00000535889 GTF3C3Q9Y5Q9 886 aa14.87□□□□□ -0.03
MTR-205ENST00000535889 FBLN2P98095 1184 aa14.87□□□□□ -0.03
MTR-205ENST00000535889 PDS5BQ9NTI5 1447 aa14.86□□□□□ -0.03
MTR-205ENST00000535889 CCDC88BA6NC98 1476 aa14.86□□□□□ -0.03
MTR-205ENST00000535889 CDCA8Q53HL2 280 aa14.84□□□□□ -0.03
MTR-205ENST00000535889 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.84□□□□□ -0.03
MTR-205ENST00000535889 NPM1P06748 294 aaKnown RBP eCLIP14.84□□□□□ -0.03
MTR-205ENST00000535889 SLC4A1APQ9BWU0 796 aaKnown RBP14.84□□□□□ -0.03
MTR-205ENST00000535889 CECR2Q9BXF3 1484 aa14.82□□□□□ -0.04
MTR-205ENST00000535889 ARHGAP35Q9NRY4 1499 aa14.8□□□□□ -0.04
MTR-205ENST00000535889 CANXP27824 592 aaKnown RBP14.8□□□□□ -0.04
MTR-205ENST00000535889 UPF2Q9HAU5 1272 aaKnown RBP14.79□□□□□ -0.04
MTR-205ENST00000535889 CCNB3Q8WWL7 1395 aa14.79□□□□□ -0.04
MTR-205ENST00000535889 CHMP7Q8WUX9 453 aaPredicted RBP14.79□□□□□ -0.04
MTR-205ENST00000535889 ZNF326Q5BKZ1 582 aaKnown RBP14.76□□□□□ -0.05
MTR-205ENST00000535889 EIF4G2P78344 907 aaKnown RBP eCLIP14.76□□□□□ -0.052e-6■□□□□ 9
MTR-205ENST00000535889 ESF1Q9H501 851 aaKnown RBP14.75□□□□□ -0.05
MTR-205ENST00000535889 ERCC6Q03468 1493 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms