RNA–Protein interactions for RNA: ENST00000534206.5

ACER3-214, Transcript of alkaline ceramidase 3, human

TSL 5

Gene ACER3, Length 834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACER3-214	ENST00000534206	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	30.07	■■■□□ 2.4	2e-29	■■■■■ 310.5
ACER3-214	ENST00000534206	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	29.48	■■■□□ 2.31	6e-28	■■■■■ 106.4
ACER3-214	ENST00000534206	WDR43	Q15061	677 aa	Known RBP eCLIP	37.17	■■■■□ 3.54	7e-25	■■■■■ 56.8
ACER3-214	ENST00000534206	DDX3X	O00571	662 aa	Known RBP eCLIP	28.62	■■■□□ 2.17	3e-17	■■■■■ 71.6
ACER3-214	ENST00000534206	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	33.83	■■■■□ 3.01	3e-9	■■■■□ 23.2
ACER3-214	ENST00000534206	EFTUD2	Q15029	972 aa	Known RBP eCLIP	26.33	■■□□□ 1.81	4e-8	■■■■■ 42.6
ACER3-214	ENST00000534206	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	22.03	■■□□□ 1.12	1e-7	■■■■■ 26.9
ACER3-214	ENST00000534206	NOLC1	Q14978	699 aa	Known RBP eCLIP	31.03	■■■□□ 2.56	2e-7	■■■■■ 40.8
ACER3-214	ENST00000534206	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	44.55	■■■■■ 4.72	6e-7	■■■□□ 19.2
ACER3-214	ENST00000534206	LSM11	P83369	360 aa	Known RBP eCLIP	24.63	■■□□□ 1.53	1e-6	■■■■■ 28.9
ACER3-214	ENST00000534206	TROVE2	P10155	538 aa	Known RBP eCLIP	24.08	■■□□□ 1.45	1e-6	■□□□□ 8.4
ACER3-214	ENST00000534206	HNRNPM	P52272	730 aa	Known RBP eCLIP	45.82	■■■■■ 4.93	1e-6	■■■■■ 27.5
ACER3-214	ENST00000534206	SF3B4	Q15427	424 aa	Known RBP eCLIP	25.78	■■□□□ 1.72	2e-6	■■■■■ 28.8
ACER3-214	ENST00000534206	U2AF2	P26368	475 aa	Known RBP eCLIP	31.39	■■■□□ 2.62	3e-6	■■■□□ 15.4
ACER3-214	ENST00000534206	SF3B1	O75533	1304 aa	Known RBP eCLIP	31.28	■■■□□ 2.6	3e-6	■■■■■ 110.9
ACER3-214	ENST00000534206	KHSRP	Q92945	711 aa	Known RBP eCLIP	32.34	■■■□□ 2.77	8e-6	■■■□□ 18.5

Retrieved 16 of 16 RNA–protein pairs in 5.7 ms