RNA–Protein interactions for RNA: ENST00000533559.5

FNTA-213, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 3

Gene FNTA, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-213ENST00000533559 AEBP2Q6ZN18 517 aaPredicted RBP18.48■□□□□ 0.55
FNTA-213ENST00000533559 CHIC1Q5VXU3 224 aa17.97■□□□□ 0.47
FNTA-213ENST00000533559 NISCHQ9Y2I1 1504 aa17.09■□□□□ 0.33
FNTA-213ENST00000533559 PHF23Q9BUL5 403 aaPredicted RBP15.81■□□□□ 0.12
FNTA-213ENST00000533559 SENP3Q9H4L4 574 aaPredicted RBP15.69■□□□□ 0.1
FNTA-213ENST00000533559 ABCC9O60706 1549 aa15.63■□□□□ 0.09
FNTA-213ENST00000533559 CCDC180Q9P1Z9 1646 aa15.53■□□□□ 0.08
FNTA-213ENST00000533559 RB1CC1Q8TDY2 1594 aa14.82□□□□□ -0.04
FNTA-213ENST00000533559 DNAJC5BQ9UF47 199 aa14.75□□□□□ -0.05
FNTA-213ENST00000533559 NACADO15069 1562 aa14.64□□□□□ -0.07
FNTA-213ENST00000533559 UNC13AQ9UPW8 1703 aa14.61□□□□□ -0.07
FNTA-213ENST00000533559 FOXD1Q16676 465 aa14.58□□□□□ -0.08
FNTA-213ENST00000533559 PLPPR3Q6T4P5 718 aa14.56□□□□□ -0.08
FNTA-213ENST00000533559 PABPN1Q86U42 306 aaKnown RBP eCLIP14.44□□□□□ -0.1
FNTA-213ENST00000533559 DCAF8L2P0C7V8 631 aa14.41□□□□□ -0.1
FNTA-213ENST00000533559 BICRAQ9NZM4 1560 aa14.4□□□□□ -0.1
FNTA-213ENST00000533559 MYO15BQ96JP2 1530 aa14.35□□□□□ -0.11
FNTA-213ENST00000533559 SHROOM4Q9ULL8 1493 aa14.16□□□□□ -0.14
FNTA-213ENST00000533559 CC2D2AQ9P2K1 1620 aa14.15□□□□□ -0.14
FNTA-213ENST00000533559 ZCCHC6Q5VYS8 1495 aaKnown RBP14.15□□□□□ -0.14
FNTA-213ENST00000533559 SCRIBQ14160 1630 aa14.12□□□□□ -0.15
FNTA-213ENST00000533559 DCAF1Q9Y4B6 1507 aa14.1□□□□□ -0.15
FNTA-213ENST00000533559 CECR2Q9BXF3 1484 aa14.09□□□□□ -0.15
FNTA-213ENST00000533559 EIF4G1Q04637 1599 aaKnown RBP14.06□□□□□ -0.16
FNTA-213ENST00000533559 PPP6R1Q9UPN7 881 aa13.99□□□□□ -0.17
FNTA-213ENST00000533559 ADRA2BP18089 450 aa13.97□□□□□ -0.17
FNTA-213ENST00000533559 PIAS4Q8N2W9 510 aaPredicted RBP13.73□□□□□ -0.21
FNTA-213ENST00000533559 DNAJC5Q9H3Z4 198 aa13.67□□□□□ -0.22
FNTA-213ENST00000533559 CUX2O14529 1486 aa13.55□□□□□ -0.24
FNTA-213ENST00000533559 ERCC6Q03468 1493 aa13.52□□□□□ -0.25
FNTA-213ENST00000533559 MSH5O43196 834 aa13.46□□□□□ -0.25
FNTA-213ENST00000533559 NCAPD3P42695 1498 aa13.46□□□□□ -0.25
FNTA-213ENST00000533559 HMGXB3Q12766 1538 aa13.44□□□□□ -0.26
FNTA-213ENST00000533559 SMARCA4P51532 1647 aa13.43□□□□□ -0.26
FNTA-213ENST00000533559 ATAD2BQ9ULI0 1458 aa13.42□□□□□ -0.26
FNTA-213ENST00000533559 SMARCA2P51531 1590 aa13.41□□□□□ -0.26
FNTA-213ENST00000533559 NESP48681 1621 aa13.38□□□□□ -0.27
FNTA-213ENST00000533559 THOC2Q8NI27 1593 aaKnown RBP13.37□□□□□ -0.27
FNTA-213ENST00000533559 BAZ1BQ9UIG0 1483 aaKnown RBP13.32□□□□□ -0.28
FNTA-213ENST00000533559 KIF21AQ7Z4S6 1674 aa13.31□□□□□ -0.28
FNTA-213ENST00000533559 BAZ1AQ9NRL2 1556 aaPredicted RBP13.3□□□□□ -0.28
FNTA-213ENST00000533559 PEG3Q9GZU2 1588 aa13.28□□□□□ -0.28
FNTA-213ENST00000533559 LAMC3Q9Y6N6 1575 aa13.28□□□□□ -0.28
FNTA-213ENST00000533559 SUPT5HO00267 1087 aaKnown RBP13.22□□□□□ -0.29
FNTA-213ENST00000533559 MROH2BQ7Z745 1585 aa13.18□□□□□ -0.3
FNTA-213ENST00000533559 PDS5BQ9NTI5 1447 aa13.13□□□□□ -0.31
FNTA-213ENST00000533559 WDR62O43379 1518 aa13.08□□□□□ -0.31
FNTA-213ENST00000533559 MRC2Q9UBG0 1479 aa13.08□□□□□ -0.32
FNTA-213ENST00000533559 WIZO95785 1651 aa13.06□□□□□ -0.32
FNTA-213ENST00000533559 TRIM41Q8WV44 630 aa13.04□□□□□ -0.32
FNTA-213ENST00000533559 CADPSQ9ULU8 1353 aa13.03□□□□□ -0.32
FNTA-213ENST00000533559 CEP164Q9UPV0 1460 aa12.99□□□□□ -0.33
FNTA-213ENST00000533559 FANCD2Q9BXW9 1451 aa12.94□□□□□ -0.34
FNTA-213ENST00000533559 PRDM2Q13029 1718 aa12.92□□□□□ -0.34
FNTA-213ENST00000533559 CFTRP13569 1480 aa12.87□□□□□ -0.35
FNTA-213ENST00000533559 URB2Q14146 1524 aaKnown RBP12.87□□□□□ -0.35
FNTA-213ENST00000533559 TOP2AP11388 1531 aaKnown RBP12.86□□□□□ -0.35
FNTA-213ENST00000533559 PPP4R3CPQ6ZMV5 832 aa12.84□□□□□ -0.35
FNTA-213ENST00000533559 RIMBP3CA6NJZ7 1639 aa12.82□□□□□ -0.36
FNTA-213ENST00000533559 RIMBP3BA6NNM3 1639 aa12.82□□□□□ -0.36
FNTA-213ENST00000533559 RIMBP3Q9UFD9 1639 aa12.82□□□□□ -0.36
FNTA-213ENST00000533559 OSCARQ8IYS5 282 aa12.79□□□□□ -0.36
FNTA-213ENST00000533559 RSF1Q96T23 1441 aaPredicted RBP12.78□□□□□ -0.36
FNTA-213ENST00000533559 SCAF1Q9H7N4 1312 aaKnown RBP12.77□□□□□ -0.37
FNTA-213ENST00000533559 EIF4G3O43432 1585 aaKnown RBP12.73□□□□□ -0.37
FNTA-213ENST00000533559 ZNF608Q9ULD9 1512 aaPredicted RBP12.73□□□□□ -0.37
FNTA-213ENST00000533559 ARHGEF11O15085 1522 aa12.72□□□□□ -0.37
FNTA-213ENST00000533559 IFT140Q96RY7 1462 aa12.72□□□□□ -0.37
FNTA-213ENST00000533559 CHD1O14646 1710 aa12.71□□□□□ -0.37
FNTA-213ENST00000533559 MAPK8IP2Q13387 824 aaPredicted RBP12.71□□□□□ -0.37
FNTA-213ENST00000533559 TOPBP1Q92547 1522 aa12.69□□□□□ -0.38
FNTA-213ENST00000533559 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
FNTA-213ENST00000533559 DNMBPQ6XZF7 1577 aa12.65□□□□□ -0.38
FNTA-213ENST00000533559 TARBP1Q13395 1621 aaKnown RBP12.62□□□□□ -0.39
FNTA-213ENST00000533559 ABCC8Q09428 1581 aa12.6□□□□□ -0.39
FNTA-213ENST00000533559 ARAP1Q96P48 1450 aa12.58□□□□□ -0.4
FNTA-213ENST00000533559 AQRO60306 1485 aaKnown RBP eCLIP12.55□□□□□ -0.41e-6■□□□□ 8.9
FNTA-213ENST00000533559 POLA1P09884 1462 aaPredicted RBP12.54□□□□□ -0.4
FNTA-213ENST00000533559 CYB5RLQ6IPT4 315 aa12.52□□□□□ -0.41
FNTA-213ENST00000533559 DMRT2Q9Y5R5 561 aa12.51□□□□□ -0.41
FNTA-213ENST00000533559 CLASP1Q7Z460 1538 aa12.49□□□□□ -0.41
FNTA-213ENST00000533559 WDR97A6NE52 1622 aa12.48□□□□□ -0.41
FNTA-213ENST00000533559 RAD54L2Q9Y4B4 1467 aa12.48□□□□□ -0.41
FNTA-213ENST00000533559 FBLN2P98095 1184 aa12.48□□□□□ -0.41
FNTA-213ENST00000533559 CNKSR2Q8WXI2 1034 aa12.48□□□□□ -0.41
FNTA-213ENST00000533559 SNAPC4Q5SXM2 1469 aa12.47□□□□□ -0.41
FNTA-213ENST00000533559 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
FNTA-213ENST00000533559 NCBP3Q53F19 620 aaKnown RBP12.47□□□□□ -0.41
FNTA-213ENST00000533559 PBRM1Q86U86 1689 aa12.46□□□□□ -0.41
FNTA-213ENST00000533559 KCNA4P22459 653 aa12.46□□□□□ -0.41
FNTA-213ENST00000533559 SYNJ1O43426 1573 aa12.45□□□□□ -0.42
FNTA-213ENST00000533559 FGD5Q6ZNL6 1462 aa12.45□□□□□ -0.42
FNTA-213ENST00000533559 SOGA1O94964 1423 aa12.43□□□□□ -0.42
FNTA-213ENST00000533559 TDRD9Q8NDG6 1382 aaKnown RBP12.43□□□□□ -0.42
FNTA-213ENST00000533559 MAGI1Q96QZ7 1491 aaPredicted RBP12.41□□□□□ -0.42
FNTA-213ENST00000533559 CUX1P39880 1505 aa12.41□□□□□ -0.42
FNTA-213ENST00000533559 POTEDQ86YR6 584 aa12.4□□□□□ -0.42
FNTA-213ENST00000533559 SYNJ2O15056 1496 aa12.37□□□□□ -0.43
FNTA-213ENST00000533559 GRIN2BQ13224 1484 aa12.37□□□□□ -0.43
FNTA-213ENST00000533559 ABCA5Q8WWZ7 1642 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms