RNA–Protein interactions for RNA: ENST00000518857.5

ATP6V1C1-203, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2 BASIC

Gene ATP6V1C1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-203ENST00000518857 AEBP2Q6ZN18 517 aaPredicted RBP25.32■■□□□ 1.64
ATP6V1C1-203ENST00000518857 CHIC1Q5VXU3 224 aa24.63■■□□□ 1.53
ATP6V1C1-203ENST00000518857 NISCHQ9Y2I1 1504 aa23.58■■□□□ 1.37
ATP6V1C1-203ENST00000518857 PHF23Q9BUL5 403 aaPredicted RBP21.61■■□□□ 1.05
ATP6V1C1-203ENST00000518857 SENP3Q9H4L4 574 aaPredicted RBP21.6■■□□□ 1.05
ATP6V1C1-203ENST00000518857 ABCC9O60706 1549 aa21.3■■□□□ 1
ATP6V1C1-203ENST00000518857 CCDC180Q9P1Z9 1646 aa21.09■□□□□ 0.97
ATP6V1C1-203ENST00000518857 RB1CC1Q8TDY2 1594 aa20.15■□□□□ 0.82
ATP6V1C1-203ENST00000518857 DNAJC5BQ9UF47 199 aa20.12■□□□□ 0.81
ATP6V1C1-203ENST00000518857 DCAF8L2P0C7V8 631 aa20.07■□□□□ 0.8
ATP6V1C1-203ENST00000518857 FOXD1Q16676 465 aa20.02■□□□□ 0.8
ATP6V1C1-203ENST00000518857 NACADO15069 1562 aa19.99■□□□□ 0.79
ATP6V1C1-203ENST00000518857 PLPPR3Q6T4P5 718 aa19.98■□□□□ 0.79
ATP6V1C1-203ENST00000518857 PABPN1Q86U42 306 aaKnown RBP eCLIP19.89■□□□□ 0.77
ATP6V1C1-203ENST00000518857 UNC13AQ9UPW8 1703 aa19.71■□□□□ 0.75
ATP6V1C1-203ENST00000518857 MYO15BQ96JP2 1530 aa19.66■□□□□ 0.74
ATP6V1C1-203ENST00000518857 BICRAQ9NZM4 1560 aa19.61■□□□□ 0.73
ATP6V1C1-203ENST00000518857 ZCCHC6Q5VYS8 1495 aaKnown RBP19.51■□□□□ 0.71
ATP6V1C1-203ENST00000518857 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
ATP6V1C1-203ENST00000518857 SCRIBQ14160 1630 aa19.32■□□□□ 0.68
ATP6V1C1-203ENST00000518857 SHROOM4Q9ULL8 1493 aa19.21■□□□□ 0.67
ATP6V1C1-203ENST00000518857 CC2D2AQ9P2K1 1620 aa19.19■□□□□ 0.66
ATP6V1C1-203ENST00000518857 CECR2Q9BXF3 1484 aa19.16■□□□□ 0.66
ATP6V1C1-203ENST00000518857 ADRA2BP18089 450 aa19.14■□□□□ 0.65
ATP6V1C1-203ENST00000518857 PPP6R1Q9UPN7 881 aa19.13■□□□□ 0.65
ATP6V1C1-203ENST00000518857 EIF4G1Q04637 1599 aaKnown RBP19.12■□□□□ 0.65
ATP6V1C1-203ENST00000518857 PIAS4Q8N2W9 510 aaPredicted RBP18.88■□□□□ 0.61
ATP6V1C1-203ENST00000518857 MSH5O43196 834 aa18.58■□□□□ 0.56
ATP6V1C1-203ENST00000518857 NCAPD3P42695 1498 aa18.5■□□□□ 0.55
ATP6V1C1-203ENST00000518857 ATAD2BQ9ULI0 1458 aa18.46■□□□□ 0.55
ATP6V1C1-203ENST00000518857 DNAJC5Q9H3Z4 198 aa18.44■□□□□ 0.54
ATP6V1C1-203ENST00000518857 SMARCA4P51532 1647 aa18.39■□□□□ 0.53
ATP6V1C1-203ENST00000518857 ERCC6Q03468 1493 aa18.34■□□□□ 0.53
ATP6V1C1-203ENST00000518857 SMARCA2P51531 1590 aa18.33■□□□□ 0.53
ATP6V1C1-203ENST00000518857 HMGXB3Q12766 1538 aa18.3■□□□□ 0.52
ATP6V1C1-203ENST00000518857 NESP48681 1621 aa18.29■□□□□ 0.52
ATP6V1C1-203ENST00000518857 CUX2O14529 1486 aa18.28■□□□□ 0.52
ATP6V1C1-203ENST00000518857 BAZ1AQ9NRL2 1556 aaPredicted RBP18.27■□□□□ 0.51
ATP6V1C1-203ENST00000518857 BAZ1BQ9UIG0 1483 aaKnown RBP18.25■□□□□ 0.51
ATP6V1C1-203ENST00000518857 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
ATP6V1C1-203ENST00000518857 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
ATP6V1C1-203ENST00000518857 LAMC3Q9Y6N6 1575 aa18.04■□□□□ 0.48
ATP6V1C1-203ENST00000518857 THOC2Q8NI27 1593 aaKnown RBP18.02■□□□□ 0.48
ATP6V1C1-203ENST00000518857 KIF21AQ7Z4S6 1674 aa17.98■□□□□ 0.47
ATP6V1C1-203ENST00000518857 WIZO95785 1651 aa17.98■□□□□ 0.47
ATP6V1C1-203ENST00000518857 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
ATP6V1C1-203ENST00000518857 CADPSQ9ULU8 1353 aa17.96■□□□□ 0.46
ATP6V1C1-203ENST00000518857 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
ATP6V1C1-203ENST00000518857 RSF1Q96T23 1441 aaPredicted RBP17.81■□□□□ 0.44
ATP6V1C1-203ENST00000518857 WDR62O43379 1518 aa17.77■□□□□ 0.44
ATP6V1C1-203ENST00000518857 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
ATP6V1C1-203ENST00000518857 CEP164Q9UPV0 1460 aa17.74■□□□□ 0.43
ATP6V1C1-203ENST00000518857 CFTRP13569 1480 aa17.72■□□□□ 0.43
ATP6V1C1-203ENST00000518857 TOP2AP11388 1531 aaKnown RBP17.69■□□□□ 0.42
ATP6V1C1-203ENST00000518857 TRIM41Q8WV44 630 aa17.66■□□□□ 0.42
ATP6V1C1-203ENST00000518857 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
ATP6V1C1-203ENST00000518857 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
ATP6V1C1-203ENST00000518857 PPP4R3CPQ6ZMV5 832 aa17.57■□□□□ 0.4
ATP6V1C1-203ENST00000518857 CCDC88BA6NC98 1476 aa17.57■□□□□ 0.4
ATP6V1C1-203ENST00000518857 OSCARQ8IYS5 282 aa17.52■□□□□ 0.4
ATP6V1C1-203ENST00000518857 PRDM2Q13029 1718 aa17.45■□□□□ 0.38
ATP6V1C1-203ENST00000518857 ZNF608Q9ULD9 1512 aaPredicted RBP17.43■□□□□ 0.38
ATP6V1C1-203ENST00000518857 MAPK8IP2Q13387 824 aaPredicted RBP17.41■□□□□ 0.38
ATP6V1C1-203ENST00000518857 TOPBP1Q92547 1522 aa17.4■□□□□ 0.38
ATP6V1C1-203ENST00000518857 IFT140Q96RY7 1462 aa17.39■□□□□ 0.37
ATP6V1C1-203ENST00000518857 ABCC8Q09428 1581 aa17.31■□□□□ 0.36
ATP6V1C1-203ENST00000518857 DNMBPQ6XZF7 1577 aa17.29■□□□□ 0.36
ATP6V1C1-203ENST00000518857 AQRO60306 1485 aaKnown RBP eCLIP17.29■□□□□ 0.36
ATP6V1C1-203ENST00000518857 RIMBP3CA6NJZ7 1639 aa17.26■□□□□ 0.35
ATP6V1C1-203ENST00000518857 RIMBP3BA6NNM3 1639 aa17.26■□□□□ 0.35
ATP6V1C1-203ENST00000518857 RIMBP3Q9UFD9 1639 aa17.26■□□□□ 0.35
ATP6V1C1-203ENST00000518857 EIF4G3O43432 1585 aaKnown RBP17.26■□□□□ 0.35
ATP6V1C1-203ENST00000518857 TARBP1Q13395 1621 aaKnown RBP17.24■□□□□ 0.35
ATP6V1C1-203ENST00000518857 POLA1P09884 1462 aaPredicted RBP17.21■□□□□ 0.35
ATP6V1C1-203ENST00000518857 RAD54L2Q9Y4B4 1467 aa17.21■□□□□ 0.35
ATP6V1C1-203ENST00000518857 FBLN2P98095 1184 aa17.21■□□□□ 0.34
ATP6V1C1-203ENST00000518857 ARHGEF11O15085 1522 aa17.2■□□□□ 0.34
ATP6V1C1-203ENST00000518857 DMRT2Q9Y5R5 561 aa17.18■□□□□ 0.34
ATP6V1C1-203ENST00000518857 TDRD9Q8NDG6 1382 aaKnown RBP17.18■□□□□ 0.34
ATP6V1C1-203ENST00000518857 CYB5RLQ6IPT4 315 aa17.17■□□□□ 0.34
ATP6V1C1-203ENST00000518857 SOGA1O94964 1423 aa17.17■□□□□ 0.34
ATP6V1C1-203ENST00000518857 CHD1O14646 1710 aa17.15■□□□□ 0.34
ATP6V1C1-203ENST00000518857 POTEDQ86YR6 584 aa17.14■□□□□ 0.33
ATP6V1C1-203ENST00000518857 NCBP3Q53F19 620 aaKnown RBP17.13■□□□□ 0.33
ATP6V1C1-203ENST00000518857 CNKSR2Q8WXI2 1034 aa17.12■□□□□ 0.33
ATP6V1C1-203ENST00000518857 FGD5Q6ZNL6 1462 aa17.11■□□□□ 0.33
ATP6V1C1-203ENST00000518857 CUX1P39880 1505 aa17.1■□□□□ 0.33
ATP6V1C1-203ENST00000518857 SUPT5HO00267 1087 aaKnown RBP17.07■□□□□ 0.32
ATP6V1C1-203ENST00000518857 SNAPC4Q5SXM2 1469 aa17.06■□□□□ 0.32
ATP6V1C1-203ENST00000518857 ARAP1Q96P48 1450 aa17.04■□□□□ 0.32
ATP6V1C1-203ENST00000518857 CHMP7Q8WUX9 453 aaPredicted RBP17.04■□□□□ 0.32
ATP6V1C1-203ENST00000518857 TRHP20396 242 aaPredicted RBP16.99■□□□□ 0.31
ATP6V1C1-203ENST00000518857 GRIN2BQ13224 1484 aa16.98■□□□□ 0.31
ATP6V1C1-203ENST00000518857 KCNA4P22459 653 aa16.96■□□□□ 0.31
ATP6V1C1-203ENST00000518857 MAGI1Q96QZ7 1491 aaPredicted RBP16.96■□□□□ 0.31
ATP6V1C1-203ENST00000518857 WDR97A6NE52 1622 aa16.96■□□□□ 0.31
ATP6V1C1-203ENST00000518857 CLASP1Q7Z460 1538 aa16.95■□□□□ 0.3
ATP6V1C1-203ENST00000518857 GAPVD1Q14C86 1478 aa16.93■□□□□ 0.3
ATP6V1C1-203ENST00000518857 SYNJ2O15056 1496 aa16.93■□□□□ 0.3
ATP6V1C1-203ENST00000518857 SYNJ1O43426 1573 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms