RNA–Protein interactions for RNA: ENST00000510163.5

FAM193B-212, Transcript of family with sequence similarity 193 member B, humanhuman

TSL 1 (best)

Gene FAM193B, Length 2,237 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM193B-212ENST00000510163 SF3B1O75533 1304 aaKnown RBP eCLIP16.18■□□□□ 0.187e-9■■■■■ 72.7
FAM193B-212ENST00000510163 NIPBLQ6KC79 2804 aaeCLIP10.92□□□□□ -0.664e-7■■■■■ 50.1
FAM193B-212ENST00000510163 PUM1Q14671 1186 aaKnown RBP eCLIP14.72□□□□□ -0.052e-11■■■■■ 47.3
FAM193B-212ENST00000510163 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.78■□□□□ 0.284e-7■■■■■ 44
FAM193B-212ENST00000510163 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.03■□□□□ 0.322e-8■■■■■ 30.8
FAM193B-212ENST00000510163 AQRO60306 1485 aaKnown RBP eCLIP23.09■■□□□ 1.299e-7■■■■■ 29
FAM193B-212ENST00000510163 PABPC4Q13310 644 aaKnown RBP eCLIP16.66■□□□□ 0.266e-6■■■■■ 28.1
FAM193B-212ENST00000510163 SF3B4Q15427 424 aaKnown RBP eCLIP15.63■□□□□ 0.097e-8■■■■■ 27.8
FAM193B-212ENST00000510163 RBM22Q9NW64 420 aaKnown RBP eCLIP15.28■□□□□ 0.042e-6■■■■□ 25.8
FAM193B-212ENST00000510163 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.23■□□□□ 0.512e-7■■■■□ 24.7
FAM193B-212ENST00000510163 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.66■□□□□ 0.15e-9■■■■□ 23.5
FAM193B-212ENST00000510163 WDR43Q15061 677 aaKnown RBP eCLIP20.01■□□□□ 0.796e-7■■■■□ 23.5
FAM193B-212ENST00000510163 PPIGQ13427 754 aaKnown RBP eCLIP15.15■□□□□ 0.022e-7■■■■□ 23.2
FAM193B-212ENST00000510163 PTBP1P26599 531 aaKnown RBP eCLIP15.02□□□□□ -0.014e-6■■■■□ 21.1
FAM193B-212ENST00000510163 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.88■□□□□ 0.452e-6■■■■□ 21
FAM193B-212ENST00000510163 ZC3H11AO75152 810 aaKnown RBP eCLIP16.21■□□□□ 0.192e-6■■■■□ 19.3
FAM193B-212ENST00000510163 EIF3HO15372 352 aaKnown RBP eCLIP17.58■□□□□ 0.42e-6■■■□□ 18.2
FAM193B-212ENST00000510163 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.88■□□□□ 0.612e-6■■■□□ 17.5
FAM193B-212ENST00000510163 SRSF9Q13242 221 aaKnown RBP eCLIP11.99□□□□□ -0.494e-9■■■□□ 16.3
FAM193B-212ENST00000510163 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.98■□□□□ 0.312e-7■■■□□ 15.9
FAM193B-212ENST00000510163 DKC1O60832 514 aaKnown RBP eCLIP16.45■□□□□ 0.226e-6■■■□□ 15
FAM193B-212ENST00000510163 EFTUD2Q15029 972 aaKnown RBP eCLIP16.22■□□□□ 0.192e-7■■■□□ 14.6
FAM193B-212ENST00000510163 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.76□□□□□ -0.531e-7■■□□□ 13.1
FAM193B-212ENST00000510163 RBM15Q96T37 977 aaKnown RBP eCLIP16.44■□□□□ 0.221e-6■■□□□ 11.9
FAM193B-212ENST00000510163 PABPN1Q86U42 306 aaKnown RBP eCLIP25.64■■□□□ 1.693e-6■□□□□ 9.8
FAM193B-212ENST00000510163 ZNF622Q969S3 477 aaKnown RBP eCLIP17.67■□□□□ 0.423e-8■□□□□ 9.4
FAM193B-212ENST00000510163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.24■□□□□ 0.996e-6■□□□□ 8.2
Retrieved 27 of 27 RNA–protein pairs in 12.4 ms