RNA–Protein interactions for RNA: ENST00000508485.2

FBXO38-212, Transcript of F-box protein 38, humanhuman

TSL 5

Gene FBXO38, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO38-212ENST00000508485 CHIC1Q5VXU3 224 aa15.91■□□□□ 0.14
FBXO38-212ENST00000508485 AEBP2Q6ZN18 517 aaPredicted RBP15.69■□□□□ 0.1
FBXO38-212ENST00000508485 NISCHQ9Y2I1 1504 aa15.19■□□□□ 0.02
FBXO38-212ENST00000508485 ABCC9O60706 1549 aa14.14□□□□□ -0.15
FBXO38-212ENST00000508485 PHF23Q9BUL5 403 aaPredicted RBP14.08□□□□□ -0.16
FBXO38-212ENST00000508485 DNAJC5BQ9UF47 199 aa13.71□□□□□ -0.21
FBXO38-212ENST00000508485 CCDC180Q9P1Z9 1646 aa13.48□□□□□ -0.25
FBXO38-212ENST00000508485 DCAF8L2P0C7V8 631 aa13.4□□□□□ -0.26
FBXO38-212ENST00000508485 PABPN1Q86U42 306 aaKnown RBP eCLIP13.33□□□□□ -0.28
FBXO38-212ENST00000508485 PLPPR3Q6T4P5 718 aa13.19□□□□□ -0.3
FBXO38-212ENST00000508485 SENP3Q9H4L4 574 aaPredicted RBP13.17□□□□□ -0.3
FBXO38-212ENST00000508485 RB1CC1Q8TDY2 1594 aa13.1□□□□□ -0.31
FBXO38-212ENST00000508485 NACADO15069 1562 aa12.94□□□□□ -0.34
FBXO38-212ENST00000508485 BICRAQ9NZM4 1560 aa12.8□□□□□ -0.36
FBXO38-212ENST00000508485 UNC13AQ9UPW8 1703 aa12.76□□□□□ -0.37
FBXO38-212ENST00000508485 CECR2Q9BXF3 1484 aa12.68□□□□□ -0.38
FBXO38-212ENST00000508485 ZCCHC6Q5VYS8 1495 aaKnown RBP12.67□□□□□ -0.38
FBXO38-212ENST00000508485 DNAJC5Q9H3Z4 198 aa12.62□□□□□ -0.39
FBXO38-212ENST00000508485 CC2D2AQ9P2K1 1620 aa12.61□□□□□ -0.39
FBXO38-212ENST00000508485 MYO15BQ96JP2 1530 aa12.57□□□□□ -0.4
FBXO38-212ENST00000508485 SCRIBQ14160 1630 aa12.52□□□□□ -0.4
FBXO38-212ENST00000508485 EIF4G1Q04637 1599 aaKnown RBP12.48□□□□□ -0.41
FBXO38-212ENST00000508485 DCAF1Q9Y4B6 1507 aa12.46□□□□□ -0.42
FBXO38-212ENST00000508485 SHROOM4Q9ULL8 1493 aa12.41□□□□□ -0.42
FBXO38-212ENST00000508485 ADRA2BP18089 450 aa12.39□□□□□ -0.43
FBXO38-212ENST00000508485 PPP6R1Q9UPN7 881 aa12.23□□□□□ -0.45
FBXO38-212ENST00000508485 KCNA4P22459 653 aa12.2□□□□□ -0.46
FBXO38-212ENST00000508485 FOXD1Q16676 465 aa12.18□□□□□ -0.46
FBXO38-212ENST00000508485 EHMT2Q96KQ7 1210 aa12.17□□□□□ -0.46
FBXO38-212ENST00000508485 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
FBXO38-212ENST00000508485 TRIM41Q8WV44 630 aa12.11□□□□□ -0.47
FBXO38-212ENST00000508485 NESP48681 1621 aa12.08□□□□□ -0.48
FBXO38-212ENST00000508485 CUX2O14529 1486 aa12.06□□□□□ -0.48
FBXO38-212ENST00000508485 NCAPD3P42695 1498 aa12.05□□□□□ -0.48
FBXO38-212ENST00000508485 SUPT5HO00267 1087 aaKnown RBP12.03□□□□□ -0.48
FBXO38-212ENST00000508485 ATAD2BQ9ULI0 1458 aa12.02□□□□□ -0.49
FBXO38-212ENST00000508485 BAZ1BQ9UIG0 1483 aaKnown RBP11.84□□□□□ -0.51
FBXO38-212ENST00000508485 SMARCA2P51531 1590 aa11.84□□□□□ -0.51
FBXO38-212ENST00000508485 SMARCA4P51532 1647 aa11.83□□□□□ -0.52
FBXO38-212ENST00000508485 HMGXB3Q12766 1538 aa11.78□□□□□ -0.52
FBXO38-212ENST00000508485 MROH2BQ7Z745 1585 aa11.78□□□□□ -0.52
FBXO38-212ENST00000508485 RSF1Q96T23 1441 aaPredicted RBP11.77□□□□□ -0.52
FBXO38-212ENST00000508485 PDS5BQ9NTI5 1447 aa11.77□□□□□ -0.52
FBXO38-212ENST00000508485 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
FBXO38-212ENST00000508485 OSCARQ8IYS5 282 aa11.75□□□□□ -0.53
FBXO38-212ENST00000508485 CADPSQ9ULU8 1353 aa11.75□□□□□ -0.53
FBXO38-212ENST00000508485 BAZ1AQ9NRL2 1556 aaPredicted RBP11.72□□□□□ -0.53
FBXO38-212ENST00000508485 PPP4R3CPQ6ZMV5 832 aa11.72□□□□□ -0.53
FBXO38-212ENST00000508485 SLC4A1APQ9BWU0 796 aaKnown RBP11.72□□□□□ -0.53
FBXO38-212ENST00000508485 KIF21AQ7Z4S6 1674 aa11.71□□□□□ -0.54
FBXO38-212ENST00000508485 LAMC3Q9Y6N6 1575 aa11.71□□□□□ -0.54
FBXO38-212ENST00000508485 CSRNP3Q8WYN3 585 aa11.68□□□□□ -0.54
FBXO38-212ENST00000508485 MRC2Q9UBG0 1479 aa11.65□□□□□ -0.54
FBXO38-212ENST00000508485 PIAS4Q8N2W9 510 aaPredicted RBP11.65□□□□□ -0.54
FBXO38-212ENST00000508485 PEG3Q9GZU2 1588 aa11.62□□□□□ -0.55
FBXO38-212ENST00000508485 CYB5RLQ6IPT4 315 aa11.6□□□□□ -0.55
FBXO38-212ENST00000508485 WIZO95785 1651 aa11.59□□□□□ -0.55
FBXO38-212ENST00000508485 FANCD2Q9BXW9 1451 aa11.58□□□□□ -0.56
FBXO38-212ENST00000508485 NCBP3Q53F19 620 aaKnown RBP11.58□□□□□ -0.56
FBXO38-212ENST00000508485 WDR62O43379 1518 aa11.56□□□□□ -0.56
FBXO38-212ENST00000508485 TRHP20396 242 aaPredicted RBP11.56□□□□□ -0.56
FBXO38-212ENST00000508485 CEP164Q9UPV0 1460 aa11.56□□□□□ -0.56
FBXO38-212ENST00000508485 FBLN2P98095 1184 aa11.51□□□□□ -0.57
FBXO38-212ENST00000508485 URB2Q14146 1524 aaKnown RBP11.5□□□□□ -0.57
FBXO38-212ENST00000508485 CFTRP13569 1480 aa11.49□□□□□ -0.57
FBXO38-212ENST00000508485 ZNF608Q9ULD9 1512 aaPredicted RBP11.47□□□□□ -0.57
FBXO38-212ENST00000508485 NPM3O75607 178 aaKnown RBP11.43□□□□□ -0.58
FBXO38-212ENST00000508485 TOP2AP11388 1531 aaKnown RBP11.43□□□□□ -0.58
FBXO38-212ENST00000508485 RIMBP3CA6NJZ7 1639 aa11.42□□□□□ -0.58
FBXO38-212ENST00000508485 RIMBP3BA6NNM3 1639 aa11.42□□□□□ -0.58
FBXO38-212ENST00000508485 RIMBP3Q9UFD9 1639 aa11.42□□□□□ -0.58
FBXO38-212ENST00000508485 AQRO60306 1485 aaKnown RBP eCLIP11.4□□□□□ -0.58
FBXO38-212ENST00000508485 CCDC88BA6NC98 1476 aa11.38□□□□□ -0.59
FBXO38-212ENST00000508485 ARHGEF11O15085 1522 aa11.37□□□□□ -0.59
FBXO38-212ENST00000508485 IFT140Q96RY7 1462 aa11.32□□□□□ -0.6
FBXO38-212ENST00000508485 TDRD9Q8NDG6 1382 aaKnown RBP11.32□□□□□ -0.6
FBXO38-212ENST00000508485 TOPBP1Q92547 1522 aa11.31□□□□□ -0.6
FBXO38-212ENST00000508485 CHMP7Q8WUX9 453 aaPredicted RBP11.29□□□□□ -0.6
FBXO38-212ENST00000508485 RAD54L2Q9Y4B4 1467 aa11.28□□□□□ -0.6
FBXO38-212ENST00000508485 ARAP1Q96P48 1450 aa11.27□□□□□ -0.6
FBXO38-212ENST00000508485 ZBTB22O15209 634 aa11.24□□□□□ -0.61
FBXO38-212ENST00000508485 SOGA1O94964 1423 aa11.24□□□□□ -0.61
FBXO38-212ENST00000508485 CNKSR2Q8WXI2 1034 aa11.23□□□□□ -0.61
FBXO38-212ENST00000508485 EIF4G3O43432 1585 aaKnown RBP11.2□□□□□ -0.62
FBXO38-212ENST00000508485 ABCC8Q09428 1581 aa11.18□□□□□ -0.62
FBXO38-212ENST00000508485 POLA1P09884 1462 aaPredicted RBP11.18□□□□□ -0.62
FBXO38-212ENST00000508485 CHD1O14646 1710 aa11.17□□□□□ -0.62
FBXO38-212ENST00000508485 SCAF1Q9H7N4 1312 aaKnown RBP11.16□□□□□ -0.62
FBXO38-212ENST00000508485 TARBP1Q13395 1621 aaKnown RBP11.16□□□□□ -0.62
FBXO38-212ENST00000508485 LOC105371045A0A1W2PR82 267 aa11.15□□□□□ -0.62
FBXO38-212ENST00000508485 DNMBPQ6XZF7 1577 aa11.15□□□□□ -0.62
FBXO38-212ENST00000508485 SNAPC4Q5SXM2 1469 aa11.14□□□□□ -0.63
FBXO38-212ENST00000508485 FAM9AQ8IZU1 332 aaPredicted RBP11.1□□□□□ -0.63
FBXO38-212ENST00000508485 FGD5Q6ZNL6 1462 aa11.1□□□□□ -0.63
FBXO38-212ENST00000508485 WRNQ14191 1432 aaPredicted RBP eCLIP11.07□□□□□ -0.64
FBXO38-212ENST00000508485 PRDM2Q13029 1718 aa11.06□□□□□ -0.64
FBXO38-212ENST00000508485 GAPVD1Q14C86 1478 aa11.06□□□□□ -0.64
FBXO38-212ENST00000508485 GRIN2BQ13224 1484 aa11.05□□□□□ -0.64
FBXO38-212ENST00000508485 CUX1P39880 1505 aa11.04□□□□□ -0.64
FBXO38-212ENST00000508485 CLASP1Q7Z460 1538 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms