RNA–Protein interactions for RNA: ENST00000495890.1

KDM4C-212, Transcript of lysine demethylase 4C, humanhuman

TSL 3

Gene KDM4C, Length 342 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-212ENST00000495890 CHIC1Q5VXU3 224 aa14.89□□□□□ -0.03
KDM4C-212ENST00000495890 NISCHQ9Y2I1 1504 aa14.61□□□□□ -0.07
KDM4C-212ENST00000495890 AEBP2Q6ZN18 517 aaPredicted RBP14.54□□□□□ -0.08
KDM4C-212ENST00000495890 ABCC9O60706 1549 aa13.26□□□□□ -0.29
KDM4C-212ENST00000495890 PHF23Q9BUL5 403 aaPredicted RBP13.22□□□□□ -0.29
KDM4C-212ENST00000495890 CCDC180Q9P1Z9 1646 aa13.21□□□□□ -0.3
KDM4C-212ENST00000495890 DNAJC5BQ9UF47 199 aa12.55□□□□□ -0.4
KDM4C-212ENST00000495890 RB1CC1Q8TDY2 1594 aa12.55□□□□□ -0.4
KDM4C-212ENST00000495890 NACADO15069 1562 aa12.43□□□□□ -0.42
KDM4C-212ENST00000495890 UNC13AQ9UPW8 1703 aa12.43□□□□□ -0.42
KDM4C-212ENST00000495890 PLPPR3Q6T4P5 718 aa12.42□□□□□ -0.42
KDM4C-212ENST00000495890 BICRAQ9NZM4 1560 aa12.32□□□□□ -0.44
KDM4C-212ENST00000495890 PABPN1Q86U42 306 aaKnown RBP eCLIP12.25□□□□□ -0.45
KDM4C-212ENST00000495890 MYO15BQ96JP2 1530 aa12.23□□□□□ -0.45
KDM4C-212ENST00000495890 SENP3Q9H4L4 574 aaPredicted RBP12.16□□□□□ -0.46
KDM4C-212ENST00000495890 DCAF8L2P0C7V8 631 aa12.14□□□□□ -0.47
KDM4C-212ENST00000495890 ZCCHC6Q5VYS8 1495 aaKnown RBP12.13□□□□□ -0.47
KDM4C-212ENST00000495890 DCAF1Q9Y4B6 1507 aa12.06□□□□□ -0.48
KDM4C-212ENST00000495890 SCRIBQ14160 1630 aa12.03□□□□□ -0.48
KDM4C-212ENST00000495890 SHROOM4Q9ULL8 1493 aa12.02□□□□□ -0.49
KDM4C-212ENST00000495890 CC2D2AQ9P2K1 1620 aa12.01□□□□□ -0.49
KDM4C-212ENST00000495890 EIF4G1Q04637 1599 aaKnown RBP11.96□□□□□ -0.5
KDM4C-212ENST00000495890 CECR2Q9BXF3 1484 aa11.93□□□□□ -0.5
KDM4C-212ENST00000495890 EHMT2Q96KQ7 1210 aa11.81□□□□□ -0.52
KDM4C-212ENST00000495890 KCNA4P22459 653 aa11.68□□□□□ -0.54
KDM4C-212ENST00000495890 ADRA2BP18089 450 aa11.67□□□□□ -0.54
KDM4C-212ENST00000495890 DNAJC5Q9H3Z4 198 aa11.5□□□□□ -0.57
KDM4C-212ENST00000495890 NCAPD3P42695 1498 aa11.47□□□□□ -0.57
KDM4C-212ENST00000495890 SMARCA4P51532 1647 aa11.46□□□□□ -0.57
KDM4C-212ENST00000495890 ATAD2BQ9ULI0 1458 aa11.45□□□□□ -0.58
KDM4C-212ENST00000495890 CUX2O14529 1486 aa11.44□□□□□ -0.58
KDM4C-212ENST00000495890 HMGXB3Q12766 1538 aa11.44□□□□□ -0.58
KDM4C-212ENST00000495890 PPP6R1Q9UPN7 881 aa11.43□□□□□ -0.58
KDM4C-212ENST00000495890 NESP48681 1621 aa11.41□□□□□ -0.58
KDM4C-212ENST00000495890 ERCC6Q03468 1493 aa11.38□□□□□ -0.59
KDM4C-212ENST00000495890 SMARCA2P51531 1590 aa11.38□□□□□ -0.59
KDM4C-212ENST00000495890 THOC2Q8NI27 1593 aaKnown RBP11.38□□□□□ -0.59
KDM4C-212ENST00000495890 PEG3Q9GZU2 1588 aa11.36□□□□□ -0.59
KDM4C-212ENST00000495890 CSRNP3Q8WYN3 585 aa11.32□□□□□ -0.6
KDM4C-212ENST00000495890 BAZ1AQ9NRL2 1556 aaPredicted RBP11.32□□□□□ -0.6
KDM4C-212ENST00000495890 KIF21AQ7Z4S6 1674 aa11.3□□□□□ -0.6
KDM4C-212ENST00000495890 BAZ1BQ9UIG0 1483 aaKnown RBP11.3□□□□□ -0.6
KDM4C-212ENST00000495890 MROH2BQ7Z745 1585 aa11.28□□□□□ -0.6
KDM4C-212ENST00000495890 LAMC3Q9Y6N6 1575 aa11.25□□□□□ -0.61
KDM4C-212ENST00000495890 FOXD1Q16676 465 aa11.24□□□□□ -0.61
KDM4C-212ENST00000495890 SLC4A1APQ9BWU0 796 aaKnown RBP11.24□□□□□ -0.61
KDM4C-212ENST00000495890 WIZO95785 1651 aa11.17□□□□□ -0.62
KDM4C-212ENST00000495890 WDR62O43379 1518 aa11.14□□□□□ -0.63
KDM4C-212ENST00000495890 PDS5BQ9NTI5 1447 aa11.1□□□□□ -0.63
KDM4C-212ENST00000495890 MRC2Q9UBG0 1479 aa11.1□□□□□ -0.63
KDM4C-212ENST00000495890 CADPSQ9ULU8 1353 aa11.07□□□□□ -0.64
KDM4C-212ENST00000495890 PPP4R3CPQ6ZMV5 832 aa11.07□□□□□ -0.64
KDM4C-212ENST00000495890 CEP164Q9UPV0 1460 aa11.02□□□□□ -0.65
KDM4C-212ENST00000495890 FANCD2Q9BXW9 1451 aa11□□□□□ -0.65
KDM4C-212ENST00000495890 CFTRP13569 1480 aa10.99□□□□□ -0.65
KDM4C-212ENST00000495890 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
KDM4C-212ENST00000495890 URB2Q14146 1524 aaKnown RBP10.99□□□□□ -0.65
KDM4C-212ENST00000495890 PRDM2Q13029 1718 aa10.97□□□□□ -0.65
KDM4C-212ENST00000495890 RSF1Q96T23 1441 aaPredicted RBP10.96□□□□□ -0.65
KDM4C-212ENST00000495890 NCBP3Q53F19 620 aaKnown RBP10.96□□□□□ -0.65
KDM4C-212ENST00000495890 TRIM41Q8WV44 630 aa10.92□□□□□ -0.66
KDM4C-212ENST00000495890 ZNF608Q9ULD9 1512 aaPredicted RBP10.86□□□□□ -0.67
KDM4C-212ENST00000495890 RIMBP3CA6NJZ7 1639 aa10.85□□□□□ -0.67
KDM4C-212ENST00000495890 RIMBP3BA6NNM3 1639 aa10.85□□□□□ -0.67
KDM4C-212ENST00000495890 RIMBP3Q9UFD9 1639 aa10.85□□□□□ -0.67
KDM4C-212ENST00000495890 EIF4G3O43432 1585 aaKnown RBP10.83□□□□□ -0.68
KDM4C-212ENST00000495890 NPM3O75607 178 aaKnown RBP10.83□□□□□ -0.68
KDM4C-212ENST00000495890 CCDC88BA6NC98 1476 aa10.82□□□□□ -0.68
KDM4C-212ENST00000495890 TOPBP1Q92547 1522 aa10.8□□□□□ -0.68
KDM4C-212ENST00000495890 SLC24A1O60721 1099 aa10.79□□□□□ -0.68
KDM4C-212ENST00000495890 TARBP1Q13395 1621 aaKnown RBP10.79□□□□□ -0.68
KDM4C-212ENST00000495890 IFT140Q96RY7 1462 aa10.78□□□□□ -0.68
KDM4C-212ENST00000495890 ARHGEF11O15085 1522 aa10.78□□□□□ -0.68
KDM4C-212ENST00000495890 CHD1O14646 1710 aa10.78□□□□□ -0.68
KDM4C-212ENST00000495890 ZBTB22O15209 634 aa10.77□□□□□ -0.69
KDM4C-212ENST00000495890 PIAS4Q8N2W9 510 aaPredicted RBP10.77□□□□□ -0.69
KDM4C-212ENST00000495890 DNMBPQ6XZF7 1577 aa10.77□□□□□ -0.69
KDM4C-212ENST00000495890 OSCARQ8IYS5 282 aa10.75□□□□□ -0.69
KDM4C-212ENST00000495890 POLA1P09884 1462 aaPredicted RBP10.7□□□□□ -0.7
KDM4C-212ENST00000495890 ARAP1Q96P48 1450 aa10.69□□□□□ -0.7
KDM4C-212ENST00000495890 AQRO60306 1485 aaKnown RBP eCLIP10.68□□□□□ -0.7
KDM4C-212ENST00000495890 WDR97A6NE52 1622 aa10.66□□□□□ -0.7
KDM4C-212ENST00000495890 ABCC8Q09428 1581 aa10.65□□□□□ -0.7
KDM4C-212ENST00000495890 RAD54L2Q9Y4B4 1467 aa10.65□□□□□ -0.7
KDM4C-212ENST00000495890 CLASP1Q7Z460 1538 aa10.64□□□□□ -0.71
KDM4C-212ENST00000495890 CUX1P39880 1505 aa10.63□□□□□ -0.71
KDM4C-212ENST00000495890 RTN4Q9NQC3 1192 aaKnown RBP10.62□□□□□ -0.71
KDM4C-212ENST00000495890 SNAPC4Q5SXM2 1469 aa10.61□□□□□ -0.71
KDM4C-212ENST00000495890 FGD5Q6ZNL6 1462 aa10.6□□□□□ -0.71
KDM4C-212ENST00000495890 PBRM1Q86U86 1689 aa10.58□□□□□ -0.72
KDM4C-212ENST00000495890 TDRD9Q8NDG6 1382 aaKnown RBP10.56□□□□□ -0.72
KDM4C-212ENST00000495890 AMER1Q5JTC6 1135 aaPredicted RBP10.56□□□□□ -0.72
KDM4C-212ENST00000495890 CNKSR2Q8WXI2 1034 aa10.56□□□□□ -0.72
KDM4C-212ENST00000495890 CYB5RLQ6IPT4 315 aa10.55□□□□□ -0.72
KDM4C-212ENST00000495890 ABCA5Q8WWZ7 1642 aa10.55□□□□□ -0.72
KDM4C-212ENST00000495890 SOGA1O94964 1423 aa10.54□□□□□ -0.72
KDM4C-212ENST00000495890 MAGI1Q96QZ7 1491 aaPredicted RBP10.53□□□□□ -0.72
KDM4C-212ENST00000495890 SYNJ1O43426 1573 aa10.52□□□□□ -0.72
KDM4C-212ENST00000495890 SYNJ2O15056 1496 aa10.5□□□□□ -0.73
KDM4C-212ENST00000495890 GRIN2BQ13224 1484 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms