RNA–Protein interactions for RNA: ENST00000490553.1

RNF149-206, Transcript of ring finger protein 149, humanhuman

TSL 4

Gene RNF149, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149-206ENST00000490553 AEBP2Q6ZN18 517 aaPredicted RBP17.35■□□□□ 0.37
RNF149-206ENST00000490553 CHIC1Q5VXU3 224 aa17.25■□□□□ 0.35
RNF149-206ENST00000490553 NISCHQ9Y2I1 1504 aa16.19■□□□□ 0.18
RNF149-206ENST00000490553 PHF23Q9BUL5 403 aaPredicted RBP15.15■□□□□ 0.02
RNF149-206ENST00000490553 SENP3Q9H4L4 574 aaPredicted RBP14.74□□□□□ -0.05
RNF149-206ENST00000490553 ABCC9O60706 1549 aa14.64□□□□□ -0.07
RNF149-206ENST00000490553 CCDC180Q9P1Z9 1646 aa14.63□□□□□ -0.07
RNF149-206ENST00000490553 PLPPR3Q6T4P5 718 aa14.13□□□□□ -0.15
RNF149-206ENST00000490553 RB1CC1Q8TDY2 1594 aa13.96□□□□□ -0.17
RNF149-206ENST00000490553 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
RNF149-206ENST00000490553 NACADO15069 1562 aa13.86□□□□□ -0.19
RNF149-206ENST00000490553 MYO15BQ96JP2 1530 aa13.67□□□□□ -0.22
RNF149-206ENST00000490553 UNC13AQ9UPW8 1703 aa13.64□□□□□ -0.23
RNF149-206ENST00000490553 DCAF8L2P0C7V8 631 aa13.64□□□□□ -0.23
RNF149-206ENST00000490553 PABPN1Q86U42 306 aaKnown RBP eCLIP13.6□□□□□ -0.23
RNF149-206ENST00000490553 FOXD1Q16676 465 aa13.59□□□□□ -0.23
RNF149-206ENST00000490553 BICRAQ9NZM4 1560 aa13.54□□□□□ -0.24
RNF149-206ENST00000490553 DCAF1Q9Y4B6 1507 aa13.43□□□□□ -0.26
RNF149-206ENST00000490553 SHROOM4Q9ULL8 1493 aa13.42□□□□□ -0.26
RNF149-206ENST00000490553 ZCCHC6Q5VYS8 1495 aaKnown RBP13.38□□□□□ -0.27
RNF149-206ENST00000490553 CC2D2AQ9P2K1 1620 aa13.27□□□□□ -0.29
RNF149-206ENST00000490553 PPP6R1Q9UPN7 881 aa13.25□□□□□ -0.29
RNF149-206ENST00000490553 ADRA2BP18089 450 aa13.24□□□□□ -0.29
RNF149-206ENST00000490553 CECR2Q9BXF3 1484 aa13.23□□□□□ -0.29
RNF149-206ENST00000490553 EIF4G1Q04637 1599 aaKnown RBP13.21□□□□□ -0.29
RNF149-206ENST00000490553 SCRIBQ14160 1630 aa13.21□□□□□ -0.3
RNF149-206ENST00000490553 DNAJC5Q9H3Z4 198 aa12.9□□□□□ -0.34
RNF149-206ENST00000490553 PIAS4Q8N2W9 510 aaPredicted RBP12.89□□□□□ -0.35
RNF149-206ENST00000490553 NCAPD3P42695 1498 aa12.79□□□□□ -0.36
RNF149-206ENST00000490553 CUX2O14529 1486 aa12.75□□□□□ -0.37
RNF149-206ENST00000490553 ATAD2BQ9ULI0 1458 aa12.7□□□□□ -0.38
RNF149-206ENST00000490553 SMARCA2P51531 1590 aa12.68□□□□□ -0.38
RNF149-206ENST00000490553 HMGXB3Q12766 1538 aa12.67□□□□□ -0.38
RNF149-206ENST00000490553 ERCC6Q03468 1493 aa12.66□□□□□ -0.38
RNF149-206ENST00000490553 SMARCA4P51532 1647 aa12.65□□□□□ -0.38
RNF149-206ENST00000490553 BAZ1AQ9NRL2 1556 aaPredicted RBP12.59□□□□□ -0.39
RNF149-206ENST00000490553 PEG3Q9GZU2 1588 aa12.57□□□□□ -0.4
RNF149-206ENST00000490553 NESP48681 1621 aa12.55□□□□□ -0.4
RNF149-206ENST00000490553 BAZ1BQ9UIG0 1483 aaKnown RBP12.54□□□□□ -0.4
RNF149-206ENST00000490553 LAMC3Q9Y6N6 1575 aa12.52□□□□□ -0.41
RNF149-206ENST00000490553 MSH5O43196 834 aa12.49□□□□□ -0.41
RNF149-206ENST00000490553 THOC2Q8NI27 1593 aaKnown RBP12.47□□□□□ -0.41
RNF149-206ENST00000490553 PPP4R3CPQ6ZMV5 832 aa12.45□□□□□ -0.42
RNF149-206ENST00000490553 MROH2BQ7Z745 1585 aa12.44□□□□□ -0.42
RNF149-206ENST00000490553 KCNA4P22459 653 aa12.44□□□□□ -0.42
RNF149-206ENST00000490553 PDS5BQ9NTI5 1447 aa12.44□□□□□ -0.42
RNF149-206ENST00000490553 KIF21AQ7Z4S6 1674 aa12.41□□□□□ -0.42
RNF149-206ENST00000490553 CADPSQ9ULU8 1353 aa12.37□□□□□ -0.43
RNF149-206ENST00000490553 MRC2Q9UBG0 1479 aa12.31□□□□□ -0.44
RNF149-206ENST00000490553 WDR62O43379 1518 aa12.3□□□□□ -0.44
RNF149-206ENST00000490553 WIZO95785 1651 aa12.29□□□□□ -0.44
RNF149-206ENST00000490553 NCBP3Q53F19 620 aaKnown RBP12.24□□□□□ -0.45
RNF149-206ENST00000490553 CEP164Q9UPV0 1460 aa12.23□□□□□ -0.45
RNF149-206ENST00000490553 CFTRP13569 1480 aa12.21□□□□□ -0.46
RNF149-206ENST00000490553 FANCD2Q9BXW9 1451 aa12.21□□□□□ -0.46
RNF149-206ENST00000490553 SCAF1Q9H7N4 1312 aaKnown RBP12.2□□□□□ -0.46
RNF149-206ENST00000490553 TRIM41Q8WV44 630 aa12.17□□□□□ -0.46
RNF149-206ENST00000490553 OSCARQ8IYS5 282 aa12.16□□□□□ -0.46
RNF149-206ENST00000490553 RSF1Q96T23 1441 aaPredicted RBP12.15□□□□□ -0.46
RNF149-206ENST00000490553 TOP2AP11388 1531 aaKnown RBP12.14□□□□□ -0.47
RNF149-206ENST00000490553 URB2Q14146 1524 aaKnown RBP12.11□□□□□ -0.47
RNF149-206ENST00000490553 PRDM2Q13029 1718 aa12.1□□□□□ -0.47
RNF149-206ENST00000490553 CNKSR2Q8WXI2 1034 aa12.08□□□□□ -0.48
RNF149-206ENST00000490553 NPM3O75607 178 aaKnown RBP12.02□□□□□ -0.49
RNF149-206ENST00000490553 IFT140Q96RY7 1462 aa12.02□□□□□ -0.49
RNF149-206ENST00000490553 ABCC8Q09428 1581 aa12.01□□□□□ -0.49
RNF149-206ENST00000490553 CCDC88BA6NC98 1476 aa12□□□□□ -0.49
RNF149-206ENST00000490553 RIMBP3CA6NJZ7 1639 aa11.97□□□□□ -0.49
RNF149-206ENST00000490553 RIMBP3BA6NNM3 1639 aa11.97□□□□□ -0.49
RNF149-206ENST00000490553 RIMBP3Q9UFD9 1639 aa11.97□□□□□ -0.49
RNF149-206ENST00000490553 TOPBP1Q92547 1522 aa11.96□□□□□ -0.49
RNF149-206ENST00000490553 ZNF608Q9ULD9 1512 aaPredicted RBP11.96□□□□□ -0.5
RNF149-206ENST00000490553 MAPK8IP2Q13387 824 aaPredicted RBP11.92□□□□□ -0.5
RNF149-206ENST00000490553 SLC4A1APQ9BWU0 796 aaKnown RBP11.92□□□□□ -0.5
RNF149-206ENST00000490553 DNMBPQ6XZF7 1577 aa11.92□□□□□ -0.5
RNF149-206ENST00000490553 ARHGEF11O15085 1522 aa11.91□□□□□ -0.5
RNF149-206ENST00000490553 EIF4G3O43432 1585 aaKnown RBP11.9□□□□□ -0.5
RNF149-206ENST00000490553 TARBP1Q13395 1621 aaKnown RBP11.89□□□□□ -0.51
RNF149-206ENST00000490553 CHD1O14646 1710 aa11.85□□□□□ -0.51
RNF149-206ENST00000490553 AQRO60306 1485 aaKnown RBP eCLIP11.84□□□□□ -0.515e-8■■■□□ 14.6
RNF149-206ENST00000490553 CYB5RLQ6IPT4 315 aa11.83□□□□□ -0.52
RNF149-206ENST00000490553 POLA1P09884 1462 aaPredicted RBP11.83□□□□□ -0.52
RNF149-206ENST00000490553 WDR97A6NE52 1622 aa11.82□□□□□ -0.52
RNF149-206ENST00000490553 EHMT2Q96KQ7 1210 aa11.81□□□□□ -0.52
RNF149-206ENST00000490553 DMRT2Q9Y5R5 561 aa11.8□□□□□ -0.52
RNF149-206ENST00000490553 RNF216Q9NWF9 866 aaPredicted RBP11.79□□□□□ -0.52
RNF149-206ENST00000490553 SOGA1O94964 1423 aa11.78□□□□□ -0.52
RNF149-206ENST00000490553 ARAP1Q96P48 1450 aa11.77□□□□□ -0.52
RNF149-206ENST00000490553 FBLN2P98095 1184 aa11.76□□□□□ -0.53
RNF149-206ENST00000490553 RAD54L2Q9Y4B4 1467 aa11.76□□□□□ -0.53
RNF149-206ENST00000490553 TDRD9Q8NDG6 1382 aaKnown RBP11.74□□□□□ -0.53
RNF149-206ENST00000490553 CLASP1Q7Z460 1538 aa11.72□□□□□ -0.53
RNF149-206ENST00000490553 FGD5Q6ZNL6 1462 aa11.72□□□□□ -0.53
RNF149-206ENST00000490553 MAGI1Q96QZ7 1491 aaPredicted RBP11.72□□□□□ -0.53
RNF149-206ENST00000490553 SYNJ1O43426 1573 aa11.71□□□□□ -0.53
RNF149-206ENST00000490553 SNAPC4Q5SXM2 1469 aa11.71□□□□□ -0.53
RNF149-206ENST00000490553 TRHP20396 242 aaPredicted RBP11.71□□□□□ -0.53
RNF149-206ENST00000490553 CHMP7Q8WUX9 453 aaPredicted RBP11.71□□□□□ -0.53
RNF149-206ENST00000490553 GRIN2BQ13224 1484 aa11.7□□□□□ -0.54
RNF149-206ENST00000490553 CUX1P39880 1505 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms