RNA–Protein interactions for RNA: ENST00000469282.3

RN7SL354P-201, Transcript of RNA, 7SL, cytoplasmic 354, pseudogene, humanhuman

BASIC

Gene RN7SL354P, Length 294 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL354P-201ENST00000469282 NISCHQ9Y2I1 1504 aa11.98□□□□□ -0.49
RN7SL354P-201ENST00000469282 ABCC9O60706 1549 aa11.4□□□□□ -0.59
RN7SL354P-201ENST00000469282 DNAJC5BQ9UF47 199 aa10.99□□□□□ -0.65
RN7SL354P-201ENST00000469282 CCDC180Q9P1Z9 1646 aa10.84□□□□□ -0.67
RN7SL354P-201ENST00000469282 PABPN1Q86U42 306 aaKnown RBP eCLIP10.59□□□□□ -0.71
RN7SL354P-201ENST00000469282 RB1CC1Q8TDY2 1594 aa10.56□□□□□ -0.72
RN7SL354P-201ENST00000469282 DCAF8L2P0C7V8 631 aa10.48□□□□□ -0.73
RN7SL354P-201ENST00000469282 NACADO15069 1562 aa10.36□□□□□ -0.75
RN7SL354P-201ENST00000469282 UNC13AQ9UPW8 1703 aa10.3□□□□□ -0.76
RN7SL354P-201ENST00000469282 DNAJC5Q9H3Z4 198 aa10.3□□□□□ -0.76
RN7SL354P-201ENST00000469282 BICRAQ9NZM4 1560 aa10.27□□□□□ -0.76
RN7SL354P-201ENST00000469282 CECR2Q9BXF3 1484 aa10.25□□□□□ -0.77
RN7SL354P-201ENST00000469282 CC2D2AQ9P2K1 1620 aa10.19□□□□□ -0.78
RN7SL354P-201ENST00000469282 EIF4G1Q04637 1599 aaKnown RBP10.07□□□□□ -0.8
RN7SL354P-201ENST00000469282 SCRIBQ14160 1630 aa10.03□□□□□ -0.8
RN7SL354P-201ENST00000469282 MYO15BQ96JP2 1530 aa10.01□□□□□ -0.81
RN7SL354P-201ENST00000469282 SHROOM4Q9ULL8 1493 aa9.98□□□□□ -0.81
RN7SL354P-201ENST00000469282 TRIM41Q8WV44 630 aa9.86□□□□□ -0.83
RN7SL354P-201ENST00000469282 ERCC6Q03468 1493 aa9.85□□□□□ -0.83
RN7SL354P-201ENST00000469282 ZCCHC6Q5VYS8 1495 aaKnown RBP9.85□□□□□ -0.83
RN7SL354P-201ENST00000469282 CUX2O14529 1486 aa9.84□□□□□ -0.83
RN7SL354P-201ENST00000469282 DCAF1Q9Y4B6 1507 aa9.77□□□□□ -0.84
RN7SL354P-201ENST00000469282 NESP48681 1621 aa9.67□□□□□ -0.86
RN7SL354P-201ENST00000469282 SMARCA2P51531 1590 aa9.59□□□□□ -0.87
RN7SL354P-201ENST00000469282 NCAPD3P42695 1498 aa9.58□□□□□ -0.88
RN7SL354P-201ENST00000469282 THOC2Q8NI27 1593 aaKnown RBP9.57□□□□□ -0.88
RN7SL354P-201ENST00000469282 ATAD2BQ9ULI0 1458 aa9.54□□□□□ -0.88
RN7SL354P-201ENST00000469282 KIF21AQ7Z4S6 1674 aa9.48□□□□□ -0.89
RN7SL354P-201ENST00000469282 HMGXB3Q12766 1538 aa9.47□□□□□ -0.89
RN7SL354P-201ENST00000469282 BAZ1BQ9UIG0 1483 aaKnown RBP9.47□□□□□ -0.89
RN7SL354P-201ENST00000469282 SMARCA4P51532 1647 aa9.44□□□□□ -0.9
RN7SL354P-201ENST00000469282 BAZ1AQ9NRL2 1556 aaPredicted RBP9.42□□□□□ -0.9
RN7SL354P-201ENST00000469282 LAMC3Q9Y6N6 1575 aa9.42□□□□□ -0.9
RN7SL354P-201ENST00000469282 PDS5BQ9NTI5 1447 aa9.42□□□□□ -0.9
RN7SL354P-201ENST00000469282 MRC2Q9UBG0 1479 aa9.39□□□□□ -0.91
RN7SL354P-201ENST00000469282 OSCARQ8IYS5 282 aa9.38□□□□□ -0.91
RN7SL354P-201ENST00000469282 TRHP20396 242 aaPredicted RBP9.34□□□□□ -0.91
RN7SL354P-201ENST00000469282 WDR62O43379 1518 aa9.33□□□□□ -0.92
RN7SL354P-201ENST00000469282 AEBP2Q6ZN18 517 aaPredicted RBP9.32□□□□□ -0.92
RN7SL354P-201ENST00000469282 RIMBP3CA6NJZ7 1639 aa9.31□□□□□ -0.92
RN7SL354P-201ENST00000469282 RIMBP3BA6NNM3 1639 aa9.31□□□□□ -0.92
RN7SL354P-201ENST00000469282 RIMBP3Q9UFD9 1639 aa9.31□□□□□ -0.92
RN7SL354P-201ENST00000469282 CADPSQ9ULU8 1353 aa9.31□□□□□ -0.92
RN7SL354P-201ENST00000469282 CEP164Q9UPV0 1460 aa9.28□□□□□ -0.92
RN7SL354P-201ENST00000469282 MROH2BQ7Z745 1585 aa9.28□□□□□ -0.92
RN7SL354P-201ENST00000469282 CYB5RLQ6IPT4 315 aa9.27□□□□□ -0.93
RN7SL354P-201ENST00000469282 PEG3Q9GZU2 1588 aa9.27□□□□□ -0.93
RN7SL354P-201ENST00000469282 ARHGEF11O15085 1522 aa9.25□□□□□ -0.93
RN7SL354P-201ENST00000469282 FANCD2Q9BXW9 1451 aa9.24□□□□□ -0.93
RN7SL354P-201ENST00000469282 URB2Q14146 1524 aaKnown RBP9.2□□□□□ -0.94
RN7SL354P-201ENST00000469282 ZNF608Q9ULD9 1512 aaPredicted RBP9.16□□□□□ -0.94
RN7SL354P-201ENST00000469282 WIZO95785 1651 aa9.16□□□□□ -0.94
RN7SL354P-201ENST00000469282 FBLN2P98095 1184 aa9.15□□□□□ -0.94
RN7SL354P-201ENST00000469282 ARAP1Q96P48 1450 aa9.15□□□□□ -0.95
RN7SL354P-201ENST00000469282 CFTRP13569 1480 aa9.1□□□□□ -0.95
RN7SL354P-201ENST00000469282 IFT140Q96RY7 1462 aa9.08□□□□□ -0.96
RN7SL354P-201ENST00000469282 EIF4G3O43432 1585 aaKnown RBP9.07□□□□□ -0.96
RN7SL354P-201ENST00000469282 CHD1O14646 1710 aa9.06□□□□□ -0.96
RN7SL354P-201ENST00000469282 AQRO60306 1485 aaKnown RBP eCLIP9.04□□□□□ -0.96
RN7SL354P-201ENST00000469282 TOPBP1Q92547 1522 aa9.01□□□□□ -0.97
RN7SL354P-201ENST00000469282 RSF1Q96T23 1441 aaPredicted RBP9.01□□□□□ -0.97
RN7SL354P-201ENST00000469282 TOP2AP11388 1531 aaKnown RBP8.97□□□□□ -0.97
RN7SL354P-201ENST00000469282 ILDR1Q86SU0 546 aaPredicted RBP8.95□□□□□ -0.98
RN7SL354P-201ENST00000469282 TDRD9Q8NDG6 1382 aaKnown RBP8.95□□□□□ -0.98
RN7SL354P-201ENST00000469282 CHMP7Q8WUX9 453 aaPredicted RBP8.94□□□□□ -0.98
RN7SL354P-201ENST00000469282 PRDM2Q13029 1718 aa8.94□□□□□ -0.98
RN7SL354P-201ENST00000469282 SNAPC4Q5SXM2 1469 aa8.93□□□□□ -0.98
RN7SL354P-201ENST00000469282 RAD54L2Q9Y4B4 1467 aa8.93□□□□□ -0.98
RN7SL354P-201ENST00000469282 TARBP1Q13395 1621 aaKnown RBP8.93□□□□□ -0.98
RN7SL354P-201ENST00000469282 DNMBPQ6XZF7 1577 aa8.92□□□□□ -0.98
RN7SL354P-201ENST00000469282 CLASP1Q7Z460 1538 aa8.91□□□□□ -0.98
RN7SL354P-201ENST00000469282 CCDC88BA6NC98 1476 aa8.9□□□□□ -0.98
RN7SL354P-201ENST00000469282 POLA1P09884 1462 aaPredicted RBP8.9□□□□□ -0.98
RN7SL354P-201ENST00000469282 GAPVD1Q14C86 1478 aa8.9□□□□□ -0.98
RN7SL354P-201ENST00000469282 SYNJ1O43426 1573 aa8.89□□□□□ -0.99
RN7SL354P-201ENST00000469282 ABCC8Q09428 1581 aa8.88□□□□□ -0.99
RN7SL354P-201ENST00000469282 SOGA1O94964 1423 aa8.87□□□□□ -0.99
RN7SL354P-201ENST00000469282 ERCC6L2Q5T890 1561 aa8.83□□□□□ -1
RN7SL354P-201ENST00000469282 SYNJ2O15056 1496 aa8.82□□□□□ -1
RN7SL354P-201ENST00000469282 FGD5Q6ZNL6 1462 aa8.82□□□□□ -1
RN7SL354P-201ENST00000469282 MAGI1Q96QZ7 1491 aaPredicted RBP8.82□□□□□ -1
RN7SL354P-201ENST00000469282 GRIN2BQ13224 1484 aa8.81□□□□□ -1
RN7SL354P-201ENST00000469282 KDM4FA0A1W2PPD8 638 aa8.79□□□□□ -1
RN7SL354P-201ENST00000469282 FAM69CQ0P6D2 419 aa8.76□□□□□ -1.01
RN7SL354P-201ENST00000469282 KIF13AQ9H1H9 1805 aa8.75□□□□□ -1.01
RN7SL354P-201ENST00000469282 PBRM1Q86U86 1689 aa8.75□□□□□ -1.01
RN7SL354P-201ENST00000469282 CUX1P39880 1505 aa8.74□□□□□ -1.01
RN7SL354P-201ENST00000469282 CEP170Q5SW79 1584 aa8.73□□□□□ -1.01
RN7SL354P-201ENST00000469282 WDR97A6NE52 1622 aa8.72□□□□□ -1.01
RN7SL354P-201ENST00000469282 GRIN2AQ12879 1464 aa8.7□□□□□ -1.02
RN7SL354P-201ENST00000469282 KDM6BO15054 1643 aa8.69□□□□□ -1.02
RN7SL354P-201ENST00000469282 NPM1P06748 294 aaKnown RBP eCLIP8.68□□□□□ -1.02
RN7SL354P-201ENST00000469282 PRG4Q92954 1404 aaPredicted RBP8.67□□□□□ -1.02
RN7SL354P-201ENST00000469282 TSPOAP1O95153 1857 aa8.66□□□□□ -1.02
RN7SL354P-201ENST00000469282 ABCC10Q5T3U5 1492 aa8.66□□□□□ -1.02
RN7SL354P-201ENST00000469282 ABCA5Q8WWZ7 1642 aa8.65□□□□□ -1.02
RN7SL354P-201ENST00000469282 DIP2BQ9P265 1576 aa8.65□□□□□ -1.02
RN7SL354P-201ENST00000469282 NUP160Q12769 1436 aa8.65□□□□□ -1.02
RN7SL354P-201ENST00000469282 TTBK1Q5TCY1 1321 aaPredicted RBP8.65□□□□□ -1.02
RN7SL354P-201ENST00000469282 ADAMTS12P58397 1594 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms