RNA–Protein interactions for RNA: ENST00000453734.1

USP34-205, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 1 (best)

Gene USP34, Length 2,708 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-205ENST00000453734 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.39□□□□□ -2.191e-6■■■■■ 73.6
USP34-205ENST00000453734 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.07□□□□□ -1.929e-13■■■■■ 72.1
USP34-205ENST00000453734 PTBP1P26599 531 aaKnown RBP eCLIP2.24□□□□□ -2.052e-8■■■■■ 71.7
USP34-205ENST00000453734 SF3B1O75533 1304 aaKnown RBP eCLIP2.15□□□□□ -2.065e-6■■■■■ 64.6
USP34-205ENST00000453734 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.92□□□□□ -1.622e-6■■■■■ 61.1
USP34-205ENST00000453734 ZC3H11AO75152 810 aaKnown RBP eCLIP2.96□□□□□ -1.942e-10■■■■■ 52.1
USP34-205ENST00000453734 RBM22Q9NW64 420 aaKnown RBP eCLIP1.62□□□□□ -2.156e-9■■■■■ 47.5
USP34-205ENST00000453734 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.08□□□□□ -2.087e-10■■■■■ 43.6
USP34-205ENST00000453734 EFTUD2Q15029 972 aaKnown RBP eCLIP2.48□□□□□ -2.013e-7■■■■■ 41.1
USP34-205ENST00000453734 QKIQ96PU8 341 aaKnown RBP eCLIP1.82□□□□□ -2.124e-7■■■■■ 37.5
USP34-205ENST00000453734 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.98□□□□□ -1.773e-7■■■■■ 34.2
USP34-205ENST00000453734 U2AF1Q01081 240 aaKnown RBP eCLIP3.64□□□□□ -1.833e-7■■■■■ 27
USP34-205ENST00000453734 AQRO60306 1485 aaKnown RBP eCLIP3.17□□□□□ -1.91e-7■■■■□ 26
USP34-205ENST00000453734 CSTF2P33240 577 aaKnown RBP eCLIP2.59□□□□□ -28e-8■■■■□ 25
USP34-205ENST00000453734 FXR2P51116 673 aaKnown RBP eCLIP6.88□□□□□ -1.311e-6■■■■□ 24
USP34-205ENST00000453734 EIF3HO15372 352 aaKnown RBP eCLIP1.91□□□□□ -2.18e-7■■■■□ 20.7
USP34-205ENST00000453734 SF3B4Q15427 424 aaKnown RBP eCLIP2.81□□□□□ -1.962e-6■■■■□ 20.5
USP34-205ENST00000453734 ZNF622Q969S3 477 aaKnown RBP eCLIP2.82□□□□□ -1.969e-7■■■■□ 20.1
USP34-205ENST00000453734 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.42□□□□□ -1.865e-7■■■□□ 19.2
USP34-205ENST00000453734 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.5□□□□□ -1.372e-10■■■□□ 19.2
USP34-205ENST00000453734 YBX3P16989 372 aaKnown RBP eCLIP3.95□□□□□ -1.789e-6■■■□□ 18.6
USP34-205ENST00000453734 DKC1O60832 514 aaKnown RBP eCLIP2.78□□□□□ -1.961e-10■■■□□ 18.6
USP34-205ENST00000453734 FXR1P51114 621 aaKnown RBP eCLIP3.78□□□□□ -1.86e-6■■■□□ 17.1
USP34-205ENST00000453734 EIF4G2P78344 907 aaKnown RBP eCLIP5.37□□□□□ -1.553e-7■■■□□ 17
USP34-205ENST00000453734 U2AF2P26368 475 aaKnown RBP eCLIP1.96□□□□□ -2.17e-9■■■□□ 16
USP34-205ENST00000453734 GPKOWQ92917 476 aaPredicted RBP eCLIP5.31□□□□□ -1.562e-7■■□□□ 14.5
USP34-205ENST00000453734 TRA2AQ13595 282 aaKnown RBP eCLIP2.48□□□□□ -2.016e-8■■□□□ 14.4
USP34-205ENST00000453734 PPIGQ13427 754 aaKnown RBP eCLIP2.66□□□□□ -1.986e-7■■□□□ 14.2
USP34-205ENST00000453734 KHSRPQ92945 711 aaKnown RBP eCLIP6.11□□□□□ -1.433e-7■■□□□ 13.7
USP34-205ENST00000453734 MATR3P43243 847 aaKnown RBP eCLIP2.81□□□□□ -1.962e-12■■□□□ 13.7
USP34-205ENST00000453734 EIF3DO15371 548 aaKnown RBP eCLIP2.76□□□□□ -1.976e-7■■□□□ 13.5
USP34-205ENST00000453734 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.3□□□□□ -1.081e-6■■□□□ 13.2
USP34-205ENST00000453734 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.49□□□□□ -1.692e-8■■□□□ 12.9
USP34-205ENST00000453734 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.74□□□□□ -1.979e-7■■□□□ 11.4
USP34-205ENST00000453734 ZRANB2O95218 330 aaKnown RBP eCLIP3.78□□□□□ -1.83e-9■□□□□ 11.1
USP34-205ENST00000453734 SRSF1Q07955 248 aaKnown RBP eCLIP2.89□□□□□ -1.953e-6■□□□□ 10.7
USP34-205ENST00000453734 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.35□□□□□ -1.875e-6■□□□□ 10.3
USP34-205ENST00000453734 HNRNPLP14866 589 aaKnown RBP eCLIP3.75□□□□□ -1.818e-8■□□□□ 8.7
USP34-205ENST00000453734 ILF3Q12906 894 aaKnown RBP eCLIP2.67□□□□□ -1.985e-6■□□□□ 8.3
Retrieved 39 of 39 RNA–protein pairs in 10.1 ms