RNA–Protein interactions for RNA: ENST00000453712.6

RAP1GDS1-206, Transcript of Rap1 GTPase-GDP dissociation stimulator 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAP1GDS1, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GDS1-206ENST00000453712 NISCHQ9Y2I1 1504 aa12.38□□□□□ -0.43
RAP1GDS1-206ENST00000453712 CCDC180Q9P1Z9 1646 aa11.51□□□□□ -0.57
RAP1GDS1-206ENST00000453712 CHIC1Q5VXU3 224 aa11.28□□□□□ -0.6
RAP1GDS1-206ENST00000453712 AEBP2Q6ZN18 517 aaPredicted RBP11.25□□□□□ -0.61
RAP1GDS1-206ENST00000453712 ABCC9O60706 1549 aa11.24□□□□□ -0.61
RAP1GDS1-206ENST00000453712 RB1CC1Q8TDY2 1594 aa10.94□□□□□ -0.66
RAP1GDS1-206ENST00000453712 NACADO15069 1562 aa10.86□□□□□ -0.67
RAP1GDS1-206ENST00000453712 MYO15BQ96JP2 1530 aa10.78□□□□□ -0.68
RAP1GDS1-206ENST00000453712 SHROOM4Q9ULL8 1493 aa10.76□□□□□ -0.69
RAP1GDS1-206ENST00000453712 DNAJC5BQ9UF47 199 aa10.64□□□□□ -0.71
RAP1GDS1-206ENST00000453712 UNC13AQ9UPW8 1703 aa10.59□□□□□ -0.71
RAP1GDS1-206ENST00000453712 BICRAQ9NZM4 1560 aa10.51□□□□□ -0.73
RAP1GDS1-206ENST00000453712 DCAF1Q9Y4B6 1507 aa10.48□□□□□ -0.73
RAP1GDS1-206ENST00000453712 CC2D2AQ9P2K1 1620 aa10.32□□□□□ -0.76
RAP1GDS1-206ENST00000453712 CECR2Q9BXF3 1484 aa10.3□□□□□ -0.76
RAP1GDS1-206ENST00000453712 EIF4G1Q04637 1599 aaKnown RBP10.28□□□□□ -0.76
RAP1GDS1-206ENST00000453712 ZCCHC6Q5VYS8 1495 aaKnown RBP10.24□□□□□ -0.77
RAP1GDS1-206ENST00000453712 PABPN1Q86U42 306 aaKnown RBP eCLIP10.24□□□□□ -0.77
RAP1GDS1-206ENST00000453712 DNAJC5Q9H3Z4 198 aa10.22□□□□□ -0.77
RAP1GDS1-206ENST00000453712 CUX2O14529 1486 aa10.18□□□□□ -0.78
RAP1GDS1-206ENST00000453712 SCRIBQ14160 1630 aa10.05□□□□□ -0.8
RAP1GDS1-206ENST00000453712 DCAF8L2P0C7V8 631 aa9.99□□□□□ -0.81
RAP1GDS1-206ENST00000453712 NCAPD3P42695 1498 aa9.93□□□□□ -0.82
RAP1GDS1-206ENST00000453712 HMGXB3Q12766 1538 aa9.93□□□□□ -0.82
RAP1GDS1-206ENST00000453712 SMARCA2P51531 1590 aa9.87□□□□□ -0.83
RAP1GDS1-206ENST00000453712 PHF23Q9BUL5 403 aaPredicted RBP9.84□□□□□ -0.83
RAP1GDS1-206ENST00000453712 ERCC6Q03468 1493 aa9.83□□□□□ -0.84
RAP1GDS1-206ENST00000453712 LAMC3Q9Y6N6 1575 aa9.82□□□□□ -0.84
RAP1GDS1-206ENST00000453712 PEG3Q9GZU2 1588 aa9.81□□□□□ -0.84
RAP1GDS1-206ENST00000453712 THOC2Q8NI27 1593 aaKnown RBP9.81□□□□□ -0.84
RAP1GDS1-206ENST00000453712 ATAD2BQ9ULI0 1458 aa9.76□□□□□ -0.85
RAP1GDS1-206ENST00000453712 SMARCA4P51532 1647 aa9.74□□□□□ -0.85
RAP1GDS1-206ENST00000453712 BAZ1AQ9NRL2 1556 aaPredicted RBP9.7□□□□□ -0.86
RAP1GDS1-206ENST00000453712 PDS5BQ9NTI5 1447 aa9.67□□□□□ -0.86
RAP1GDS1-206ENST00000453712 SENP3Q9H4L4 574 aaPredicted RBP9.67□□□□□ -0.86
RAP1GDS1-206ENST00000453712 WDR62O43379 1518 aa9.65□□□□□ -0.87
RAP1GDS1-206ENST00000453712 BAZ1BQ9UIG0 1483 aaKnown RBP9.65□□□□□ -0.87
RAP1GDS1-206ENST00000453712 KIF21AQ7Z4S6 1674 aa9.62□□□□□ -0.87
RAP1GDS1-206ENST00000453712 MRC2Q9UBG0 1479 aa9.61□□□□□ -0.87
RAP1GDS1-206ENST00000453712 NESP48681 1621 aa9.55□□□□□ -0.88
RAP1GDS1-206ENST00000453712 CADPSQ9ULU8 1353 aa9.51□□□□□ -0.89
RAP1GDS1-206ENST00000453712 PRDM2Q13029 1718 aa9.5□□□□□ -0.89
RAP1GDS1-206ENST00000453712 CEP164Q9UPV0 1460 aa9.47□□□□□ -0.89
RAP1GDS1-206ENST00000453712 WDR97A6NE52 1622 aa9.41□□□□□ -0.9
RAP1GDS1-206ENST00000453712 CFTRP13569 1480 aa9.4□□□□□ -0.9
RAP1GDS1-206ENST00000453712 MROH2BQ7Z745 1585 aa9.4□□□□□ -0.91
RAP1GDS1-206ENST00000453712 RIMBP3CA6NJZ7 1639 aa9.39□□□□□ -0.91
RAP1GDS1-206ENST00000453712 RIMBP3BA6NNM3 1639 aa9.39□□□□□ -0.91
RAP1GDS1-206ENST00000453712 RIMBP3Q9UFD9 1639 aa9.39□□□□□ -0.91
RAP1GDS1-206ENST00000453712 OSCARQ8IYS5 282 aa9.39□□□□□ -0.91
RAP1GDS1-206ENST00000453712 ABCC8Q09428 1581 aa9.38□□□□□ -0.91
RAP1GDS1-206ENST00000453712 FANCD2Q9BXW9 1451 aa9.38□□□□□ -0.91
RAP1GDS1-206ENST00000453712 IFT140Q96RY7 1462 aa9.36□□□□□ -0.91
RAP1GDS1-206ENST00000453712 TRIM41Q8WV44 630 aa9.36□□□□□ -0.91
RAP1GDS1-206ENST00000453712 RSF1Q96T23 1441 aaPredicted RBP9.33□□□□□ -0.92
RAP1GDS1-206ENST00000453712 TOP2AP11388 1531 aaKnown RBP9.32□□□□□ -0.92
RAP1GDS1-206ENST00000453712 ARHGEF11O15085 1522 aa9.31□□□□□ -0.92
RAP1GDS1-206ENST00000453712 URB2Q14146 1524 aaKnown RBP9.3□□□□□ -0.92
RAP1GDS1-206ENST00000453712 PLPPR3Q6T4P5 718 aa9.28□□□□□ -0.92
RAP1GDS1-206ENST00000453712 WIZO95785 1651 aa9.26□□□□□ -0.93
RAP1GDS1-206ENST00000453712 DNMBPQ6XZF7 1577 aa9.24□□□□□ -0.93
RAP1GDS1-206ENST00000453712 EIF4G3O43432 1585 aaKnown RBP9.23□□□□□ -0.93
RAP1GDS1-206ENST00000453712 CHD1O14646 1710 aa9.21□□□□□ -0.94
RAP1GDS1-206ENST00000453712 TARBP1Q13395 1621 aaKnown RBP9.2□□□□□ -0.94
RAP1GDS1-206ENST00000453712 TOPBP1Q92547 1522 aa9.2□□□□□ -0.94
RAP1GDS1-206ENST00000453712 CLASP1Q7Z460 1538 aa9.19□□□□□ -0.94
RAP1GDS1-206ENST00000453712 ARAP1Q96P48 1450 aa9.18□□□□□ -0.94
RAP1GDS1-206ENST00000453712 SYNJ1O43426 1573 aa9.17□□□□□ -0.94
RAP1GDS1-206ENST00000453712 MAGI1Q96QZ7 1491 aaPredicted RBP9.14□□□□□ -0.95
RAP1GDS1-206ENST00000453712 ZNF608Q9ULD9 1512 aaPredicted RBP9.11□□□□□ -0.95
RAP1GDS1-206ENST00000453712 CCDC88BA6NC98 1476 aa9.05□□□□□ -0.96
RAP1GDS1-206ENST00000453712 SYNJ2O15056 1496 aa9.04□□□□□ -0.96
RAP1GDS1-206ENST00000453712 POLA1P09884 1462 aaPredicted RBP9.04□□□□□ -0.96
RAP1GDS1-206ENST00000453712 GRIN2BQ13224 1484 aa9.04□□□□□ -0.96
RAP1GDS1-206ENST00000453712 PBRM1Q86U86 1689 aa9.03□□□□□ -0.96
RAP1GDS1-206ENST00000453712 SHROOM2Q13796 1616 aa9.01□□□□□ -0.97
RAP1GDS1-206ENST00000453712 SNAPC4Q5SXM2 1469 aa9□□□□□ -0.97
RAP1GDS1-206ENST00000453712 ABCA5Q8WWZ7 1642 aa8.98□□□□□ -0.97
RAP1GDS1-206ENST00000453712 CYB5RLQ6IPT4 315 aa8.98□□□□□ -0.97
RAP1GDS1-206ENST00000453712 SOGA1O94964 1423 aa8.97□□□□□ -0.97
RAP1GDS1-206ENST00000453712 AQRO60306 1485 aaKnown RBP eCLIP8.97□□□□□ -0.97
RAP1GDS1-206ENST00000453712 GAPVD1Q14C86 1478 aa8.97□□□□□ -0.97
RAP1GDS1-206ENST00000453712 TRHP20396 242 aaPredicted RBP8.96□□□□□ -0.98
RAP1GDS1-206ENST00000453712 ABCA10Q8WWZ4 1543 aa8.95□□□□□ -0.98
RAP1GDS1-206ENST00000453712 FGD5Q6ZNL6 1462 aa8.93□□□□□ -0.98
RAP1GDS1-206ENST00000453712 NUP160Q12769 1436 aa8.93□□□□□ -0.98
RAP1GDS1-206ENST00000453712 KIF13AQ9H1H9 1805 aa8.92□□□□□ -0.98
RAP1GDS1-206ENST00000453712 MAPKBP1O60336 1514 aa8.92□□□□□ -0.98
RAP1GDS1-206ENST00000453712 ADAMTS12P58397 1594 aa8.92□□□□□ -0.98
RAP1GDS1-206ENST00000453712 CEP170Q5SW79 1584 aa8.89□□□□□ -0.99
RAP1GDS1-206ENST00000453712 CUX1P39880 1505 aa8.89□□□□□ -0.99
RAP1GDS1-206ENST00000453712 GRIN2AQ12879 1464 aa8.89□□□□□ -0.99
RAP1GDS1-206ENST00000453712 ERICH3Q5RHP9 1530 aa8.89□□□□□ -0.99
RAP1GDS1-206ENST00000453712 CHMP7Q8WUX9 453 aaPredicted RBP8.88□□□□□ -0.99
RAP1GDS1-206ENST00000453712 RAD54L2Q9Y4B4 1467 aa8.87□□□□□ -0.99
RAP1GDS1-206ENST00000453712 BIVM-ERCC5R4GMW8 1640 aa8.86□□□□□ -0.99
RAP1GDS1-206ENST00000453712 FHAD1B1AJZ9 1412 aa8.85□□□□□ -0.99
RAP1GDS1-206ENST00000453712 FOXD1Q16676 465 aa8.85□□□□□ -0.99
RAP1GDS1-206ENST00000453712 ABCC10Q5T3U5 1492 aa8.84□□□□□ -0.99
RAP1GDS1-206ENST00000453712 TDRD9Q8NDG6 1382 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms