RNA–Protein interactions for RNA: ENST00000439222.5

RAPH1-209, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RAPH1, Length 1,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-209ENST00000439222 AEBP2Q6ZN18 517 aaPredicted RBP14.14□□□□□ -0.15
RAPH1-209ENST00000439222 CHIC1Q5VXU3 224 aa13.95□□□□□ -0.18
RAPH1-209ENST00000439222 NISCHQ9Y2I1 1504 aa13.38□□□□□ -0.27
RAPH1-209ENST00000439222 PHF23Q9BUL5 403 aaPredicted RBP12.29□□□□□ -0.44
RAPH1-209ENST00000439222 SENP3Q9H4L4 574 aaPredicted RBP11.95□□□□□ -0.5
RAPH1-209ENST00000439222 CCDC180Q9P1Z9 1646 aa11.88□□□□□ -0.51
RAPH1-209ENST00000439222 ABCC9O60706 1549 aa11.65□□□□□ -0.54
RAPH1-209ENST00000439222 PLPPR3Q6T4P5 718 aa11.4□□□□□ -0.58
RAPH1-209ENST00000439222 DCAF8L2P0C7V8 631 aa11.17□□□□□ -0.62
RAPH1-209ENST00000439222 ZCCHC6Q5VYS8 1495 aaKnown RBP11.16□□□□□ -0.62
RAPH1-209ENST00000439222 RB1CC1Q8TDY2 1594 aa11.15□□□□□ -0.62
RAPH1-209ENST00000439222 NACADO15069 1562 aa11.13□□□□□ -0.63
RAPH1-209ENST00000439222 FOXD1Q16676 465 aa11.09□□□□□ -0.63
RAPH1-209ENST00000439222 UNC13AQ9UPW8 1703 aa11.06□□□□□ -0.64
RAPH1-209ENST00000439222 MYO15BQ96JP2 1530 aa11.04□□□□□ -0.64
RAPH1-209ENST00000439222 DCAF1Q9Y4B6 1507 aa11.02□□□□□ -0.64
RAPH1-209ENST00000439222 SCRIBQ14160 1630 aa10.91□□□□□ -0.66
RAPH1-209ENST00000439222 BICRAQ9NZM4 1560 aa10.9□□□□□ -0.66
RAPH1-209ENST00000439222 PABPN1Q86U42 306 aaKnown RBP eCLIP10.89□□□□□ -0.67
RAPH1-209ENST00000439222 ADRA2BP18089 450 aa10.82□□□□□ -0.68
RAPH1-209ENST00000439222 PPP6R1Q9UPN7 881 aa10.81□□□□□ -0.68
RAPH1-209ENST00000439222 DNAJC5BQ9UF47 199 aa10.72□□□□□ -0.69
RAPH1-209ENST00000439222 SHROOM4Q9ULL8 1493 aa10.65□□□□□ -0.71
RAPH1-209ENST00000439222 EIF4G1Q04637 1599 aaKnown RBP10.57□□□□□ -0.72
RAPH1-209ENST00000439222 CC2D2AQ9P2K1 1620 aa10.55□□□□□ -0.72
RAPH1-209ENST00000439222 PIAS4Q8N2W9 510 aaPredicted RBP10.53□□□□□ -0.72
RAPH1-209ENST00000439222 CECR2Q9BXF3 1484 aa10.49□□□□□ -0.73
RAPH1-209ENST00000439222 SMARCA4P51532 1647 aa10.4□□□□□ -0.74
RAPH1-209ENST00000439222 EHMT2Q96KQ7 1210 aa10.38□□□□□ -0.75
RAPH1-209ENST00000439222 MROH2BQ7Z745 1585 aa10.36□□□□□ -0.75
RAPH1-209ENST00000439222 BAZ1AQ9NRL2 1556 aaPredicted RBP10.34□□□□□ -0.75
RAPH1-209ENST00000439222 ATAD2BQ9ULI0 1458 aa10.32□□□□□ -0.76
RAPH1-209ENST00000439222 WIZO95785 1651 aa10.28□□□□□ -0.76
RAPH1-209ENST00000439222 PEG3Q9GZU2 1588 aa10.28□□□□□ -0.76
RAPH1-209ENST00000439222 NCAPD3P42695 1498 aa10.27□□□□□ -0.76
RAPH1-209ENST00000439222 SMARCA2P51531 1590 aa10.27□□□□□ -0.77
RAPH1-209ENST00000439222 HMGXB3Q12766 1538 aa10.24□□□□□ -0.77
RAPH1-209ENST00000439222 BAZ1BQ9UIG0 1483 aaKnown RBP10.22□□□□□ -0.77
RAPH1-209ENST00000439222 RSF1Q96T23 1441 aaPredicted RBP10.22□□□□□ -0.77
RAPH1-209ENST00000439222 MSH5O43196 834 aa10.15□□□□□ -0.79
RAPH1-209ENST00000439222 NESP48681 1621 aa10.12□□□□□ -0.79
RAPH1-209ENST00000439222 TOP2AP11388 1531 aaKnown RBP10.1□□□□□ -0.79
RAPH1-209ENST00000439222 PPP4R3CPQ6ZMV5 832 aa10.08□□□□□ -0.8
RAPH1-209ENST00000439222 KCNA4P22459 653 aa10.05□□□□□ -0.8
RAPH1-209ENST00000439222 KIF21AQ7Z4S6 1674 aa10.03□□□□□ -0.8
RAPH1-209ENST00000439222 LAMC3Q9Y6N6 1575 aa10.01□□□□□ -0.81
RAPH1-209ENST00000439222 CCDC88BA6NC98 1476 aa10□□□□□ -0.81
RAPH1-209ENST00000439222 SUPT5HO00267 1087 aaKnown RBP9.98□□□□□ -0.81
RAPH1-209ENST00000439222 CADPSQ9ULU8 1353 aa9.98□□□□□ -0.81
RAPH1-209ENST00000439222 ERCC6Q03468 1493 aa9.97□□□□□ -0.81
RAPH1-209ENST00000439222 THOC2Q8NI27 1593 aaKnown RBP9.95□□□□□ -0.82
RAPH1-209ENST00000439222 CFTRP13569 1480 aa9.94□□□□□ -0.82
RAPH1-209ENST00000439222 PRDM2Q13029 1718 aa9.94□□□□□ -0.82
RAPH1-209ENST00000439222 PDS5BQ9NTI5 1447 aa9.89□□□□□ -0.83
RAPH1-209ENST00000439222 SLC24A1O60721 1099 aa9.89□□□□□ -0.83
RAPH1-209ENST00000439222 FANCD2Q9BXW9 1451 aa9.89□□□□□ -0.83
RAPH1-209ENST00000439222 SCAF1Q9H7N4 1312 aaKnown RBP9.86□□□□□ -0.83
RAPH1-209ENST00000439222 CEP164Q9UPV0 1460 aa9.86□□□□□ -0.83
RAPH1-209ENST00000439222 NCBP3Q53F19 620 aaKnown RBP9.85□□□□□ -0.83
RAPH1-209ENST00000439222 MRC2Q9UBG0 1479 aa9.84□□□□□ -0.83
RAPH1-209ENST00000439222 CUX2O14529 1486 aa9.83□□□□□ -0.84
RAPH1-209ENST00000439222 WDR62O43379 1518 aa9.83□□□□□ -0.84
RAPH1-209ENST00000439222 URB2Q14146 1524 aaKnown RBP9.83□□□□□ -0.84
RAPH1-209ENST00000439222 CSRNP3Q8WYN3 585 aa9.79□□□□□ -0.84
RAPH1-209ENST00000439222 MAPK8IP2Q13387 824 aaPredicted RBP9.77□□□□□ -0.85
RAPH1-209ENST00000439222 TOPBP1Q92547 1522 aa9.75□□□□□ -0.85
RAPH1-209ENST00000439222 CNKSR2Q8WXI2 1034 aa9.74□□□□□ -0.85
RAPH1-209ENST00000439222 DNMBPQ6XZF7 1577 aa9.73□□□□□ -0.85
RAPH1-209ENST00000439222 NPM3O75607 178 aaKnown RBP9.72□□□□□ -0.85
RAPH1-209ENST00000439222 CUX1P39880 1505 aa9.71□□□□□ -0.85
RAPH1-209ENST00000439222 ABCC8Q09428 1581 aa9.7□□□□□ -0.86
RAPH1-209ENST00000439222 ZNF608Q9ULD9 1512 aaPredicted RBP9.68□□□□□ -0.86
RAPH1-209ENST00000439222 TARBP1Q13395 1621 aaKnown RBP9.67□□□□□ -0.86
RAPH1-209ENST00000439222 POLA1P09884 1462 aaPredicted RBP9.67□□□□□ -0.86
RAPH1-209ENST00000439222 RAD54L2Q9Y4B4 1467 aa9.66□□□□□ -0.86
RAPH1-209ENST00000439222 SLC4A1APQ9BWU0 796 aaKnown RBP9.66□□□□□ -0.86
RAPH1-209ENST00000439222 SYNJ1O43426 1573 aa9.66□□□□□ -0.86
RAPH1-209ENST00000439222 FGD5Q6ZNL6 1462 aa9.65□□□□□ -0.86
RAPH1-209ENST00000439222 EIF4G3O43432 1585 aaKnown RBP9.63□□□□□ -0.87
RAPH1-209ENST00000439222 IFT140Q96RY7 1462 aa9.63□□□□□ -0.87
RAPH1-209ENST00000439222 BIVM-ERCC5R4GMW8 1640 aa9.63□□□□□ -0.87
RAPH1-209ENST00000439222 WDR97A6NE52 1622 aa9.62□□□□□ -0.87
RAPH1-209ENST00000439222 TOP2BQ02880 1626 aa9.61□□□□□ -0.87
RAPH1-209ENST00000439222 AQRO60306 1485 aaKnown RBP eCLIP9.6□□□□□ -0.87
RAPH1-209ENST00000439222 WRNQ14191 1432 aaPredicted RBP eCLIP9.6□□□□□ -0.87
RAPH1-209ENST00000439222 SOGA1O94964 1423 aa9.59□□□□□ -0.87
RAPH1-209ENST00000439222 TDRD9Q8NDG6 1382 aaKnown RBP9.58□□□□□ -0.88
RAPH1-209ENST00000439222 DMRT2Q9Y5R5 561 aa9.56□□□□□ -0.88
RAPH1-209ENST00000439222 PBRM1Q86U86 1689 aa9.54□□□□□ -0.88
RAPH1-209ENST00000439222 CHD1O14646 1710 aa9.54□□□□□ -0.88
RAPH1-209ENST00000439222 ABCA5Q8WWZ7 1642 aa9.54□□□□□ -0.88
RAPH1-209ENST00000439222 DNAJC5Q9H3Z4 198 aa9.53□□□□□ -0.88
RAPH1-209ENST00000439222 ABCA10Q8WWZ4 1543 aa9.53□□□□□ -0.88
RAPH1-209ENST00000439222 RNF216Q9NWF9 866 aaPredicted RBP9.51□□□□□ -0.89
RAPH1-209ENST00000439222 SNAPC4Q5SXM2 1469 aa9.5□□□□□ -0.89
RAPH1-209ENST00000439222 GAPVD1Q14C86 1478 aa9.49□□□□□ -0.89
RAPH1-209ENST00000439222 RTN4Q9NQC3 1192 aaKnown RBP9.48□□□□□ -0.89
RAPH1-209ENST00000439222 GRIN2BQ13224 1484 aa9.46□□□□□ -0.89
RAPH1-209ENST00000439222 FBLN2P98095 1184 aa9.44□□□□□ -0.9
RAPH1-209ENST00000439222 AMER1Q5JTC6 1135 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms