RNA–Protein interactions for RNA: ENST00000425850.1

AC116609.1-201, humanhuman

TSL 4 BASIC

Gene AC116609.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116609.1-201ENST00000425850 AEBP2Q6ZN18 517 aaPredicted RBP23.37■■□□□ 1.33
AC116609.1-201ENST00000425850 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
AC116609.1-201ENST00000425850 NISCHQ9Y2I1 1504 aa21.51■■□□□ 1.03
AC116609.1-201ENST00000425850 PHF23Q9BUL5 403 aaPredicted RBP20.09■□□□□ 0.81
AC116609.1-201ENST00000425850 ABCC9O60706 1549 aa20.02■□□□□ 0.79
AC116609.1-201ENST00000425850 SENP3Q9H4L4 574 aaPredicted RBP19.98■□□□□ 0.79
AC116609.1-201ENST00000425850 CCDC180Q9P1Z9 1646 aa19.5■□□□□ 0.71
AC116609.1-201ENST00000425850 DNAJC5BQ9UF47 199 aa19.36■□□□□ 0.69
AC116609.1-201ENST00000425850 RB1CC1Q8TDY2 1594 aa18.83■□□□□ 0.6
AC116609.1-201ENST00000425850 PLPPR3Q6T4P5 718 aa18.69■□□□□ 0.58
AC116609.1-201ENST00000425850 NACADO15069 1562 aa18.56■□□□□ 0.56
AC116609.1-201ENST00000425850 PABPN1Q86U42 306 aaKnown RBP eCLIP18.53■□□□□ 0.56
AC116609.1-201ENST00000425850 UNC13AQ9UPW8 1703 aa18.45■□□□□ 0.54
AC116609.1-201ENST00000425850 FOXD1Q16676 465 aa18.42■□□□□ 0.54
AC116609.1-201ENST00000425850 BICRAQ9NZM4 1560 aa18.31■□□□□ 0.52
AC116609.1-201ENST00000425850 DCAF8L2P0C7V8 631 aa18.26■□□□□ 0.51
AC116609.1-201ENST00000425850 DNAJC5Q9H3Z4 198 aa18.25■□□□□ 0.51
AC116609.1-201ENST00000425850 MYO15BQ96JP2 1530 aa18.13■□□□□ 0.49
AC116609.1-201ENST00000425850 CECR2Q9BXF3 1484 aa18.12■□□□□ 0.49
AC116609.1-201ENST00000425850 CC2D2AQ9P2K1 1620 aa18.09■□□□□ 0.49
AC116609.1-201ENST00000425850 SHROOM4Q9ULL8 1493 aa18.01■□□□□ 0.47
AC116609.1-201ENST00000425850 EIF4G1Q04637 1599 aaKnown RBP17.9■□□□□ 0.46
AC116609.1-201ENST00000425850 ZCCHC6Q5VYS8 1495 aaKnown RBP17.78■□□□□ 0.44
AC116609.1-201ENST00000425850 DCAF1Q9Y4B6 1507 aa17.76■□□□□ 0.43
AC116609.1-201ENST00000425850 PPP6R1Q9UPN7 881 aa17.68■□□□□ 0.42
AC116609.1-201ENST00000425850 SCRIBQ14160 1630 aa17.67■□□□□ 0.42
AC116609.1-201ENST00000425850 ADRA2BP18089 450 aa17.66■□□□□ 0.42
AC116609.1-201ENST00000425850 CUX2O14529 1486 aa17.56■□□□□ 0.4
AC116609.1-201ENST00000425850 PIAS4Q8N2W9 510 aaPredicted RBP17.4■□□□□ 0.38
AC116609.1-201ENST00000425850 ERCC6Q03468 1493 aa17.32■□□□□ 0.36
AC116609.1-201ENST00000425850 NCAPD3P42695 1498 aa17.15■□□□□ 0.34
AC116609.1-201ENST00000425850 TRIM41Q8WV44 630 aa17.13■□□□□ 0.33
AC116609.1-201ENST00000425850 MSH5O43196 834 aa17.11■□□□□ 0.33
AC116609.1-201ENST00000425850 NESP48681 1621 aa17.03■□□□□ 0.32
AC116609.1-201ENST00000425850 THOC2Q8NI27 1593 aaKnown RBP17.01■□□□□ 0.31
AC116609.1-201ENST00000425850 ATAD2BQ9ULI0 1458 aa16.99■□□□□ 0.31
AC116609.1-201ENST00000425850 HMGXB3Q12766 1538 aa16.96■□□□□ 0.3
AC116609.1-201ENST00000425850 SMARCA2P51531 1590 aa16.91■□□□□ 0.3
AC116609.1-201ENST00000425850 LAMC3Q9Y6N6 1575 aa16.86■□□□□ 0.29
AC116609.1-201ENST00000425850 SMARCA4P51532 1647 aa16.84■□□□□ 0.29
AC116609.1-201ENST00000425850 KIF21AQ7Z4S6 1674 aa16.83■□□□□ 0.28
AC116609.1-201ENST00000425850 BAZ1BQ9UIG0 1483 aaKnown RBP16.77■□□□□ 0.28
AC116609.1-201ENST00000425850 PDS5BQ9NTI5 1447 aa16.76■□□□□ 0.27
AC116609.1-201ENST00000425850 BAZ1AQ9NRL2 1556 aaPredicted RBP16.72■□□□□ 0.27
AC116609.1-201ENST00000425850 PEG3Q9GZU2 1588 aa16.69■□□□□ 0.26
AC116609.1-201ENST00000425850 OSCARQ8IYS5 282 aa16.64■□□□□ 0.25
AC116609.1-201ENST00000425850 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.25
AC116609.1-201ENST00000425850 WDR62O43379 1518 aa16.64■□□□□ 0.25
AC116609.1-201ENST00000425850 MROH2BQ7Z745 1585 aa16.57■□□□□ 0.24
AC116609.1-201ENST00000425850 CADPSQ9ULU8 1353 aa16.57■□□□□ 0.24
AC116609.1-201ENST00000425850 RIMBP3CA6NJZ7 1639 aa16.49■□□□□ 0.23
AC116609.1-201ENST00000425850 RIMBP3BA6NNM3 1639 aa16.49■□□□□ 0.23
AC116609.1-201ENST00000425850 RIMBP3Q9UFD9 1639 aa16.49■□□□□ 0.23
AC116609.1-201ENST00000425850 CEP164Q9UPV0 1460 aa16.45■□□□□ 0.22
AC116609.1-201ENST00000425850 PPP4R3CPQ6ZMV5 832 aa16.39■□□□□ 0.21
AC116609.1-201ENST00000425850 WIZO95785 1651 aa16.39■□□□□ 0.21
AC116609.1-201ENST00000425850 FANCD2Q9BXW9 1451 aa16.37■□□□□ 0.21
AC116609.1-201ENST00000425850 ARHGEF11O15085 1522 aa16.36■□□□□ 0.21
AC116609.1-201ENST00000425850 SCAF1Q9H7N4 1312 aaKnown RBP16.35■□□□□ 0.21
AC116609.1-201ENST00000425850 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
AC116609.1-201ENST00000425850 URB2Q14146 1524 aaKnown RBP16.28■□□□□ 0.2
AC116609.1-201ENST00000425850 CYB5RLQ6IPT4 315 aa16.27■□□□□ 0.2
AC116609.1-201ENST00000425850 CFTRP13569 1480 aa16.26■□□□□ 0.19
AC116609.1-201ENST00000425850 ZNF608Q9ULD9 1512 aaPredicted RBP16.16■□□□□ 0.18
AC116609.1-201ENST00000425850 IFT140Q96RY7 1462 aa16.16■□□□□ 0.18
AC116609.1-201ENST00000425850 TOP2AP11388 1531 aaKnown RBP16.15■□□□□ 0.18
AC116609.1-201ENST00000425850 RSF1Q96T23 1441 aaPredicted RBP16.15■□□□□ 0.18
AC116609.1-201ENST00000425850 ARAP1Q96P48 1450 aa16.15■□□□□ 0.18
AC116609.1-201ENST00000425850 PRDM2Q13029 1718 aa16.11■□□□□ 0.17
AC116609.1-201ENST00000425850 CHD1O14646 1710 aa16.08■□□□□ 0.17
AC116609.1-201ENST00000425850 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
AC116609.1-201ENST00000425850 EIF4G3O43432 1585 aaKnown RBP16.06■□□□□ 0.16
AC116609.1-201ENST00000425850 TOPBP1Q92547 1522 aa16■□□□□ 0.15
AC116609.1-201ENST00000425850 KCNA4P22459 653 aa16■□□□□ 0.15
AC116609.1-201ENST00000425850 CNKSR2Q8WXI2 1034 aa16■□□□□ 0.15
AC116609.1-201ENST00000425850 MAPK8IP2Q13387 824 aaPredicted RBP15.97■□□□□ 0.15
AC116609.1-201ENST00000425850 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
AC116609.1-201ENST00000425850 ABCC8Q09428 1581 aa15.96■□□□□ 0.15
AC116609.1-201ENST00000425850 FBLN2P98095 1184 aa15.95■□□□□ 0.14
AC116609.1-201ENST00000425850 AQRO60306 1485 aaKnown RBP eCLIP15.95■□□□□ 0.14
AC116609.1-201ENST00000425850 DMRT2Q9Y5R5 561 aa15.93■□□□□ 0.14
AC116609.1-201ENST00000425850 TARBP1Q13395 1621 aaKnown RBP15.93■□□□□ 0.14
AC116609.1-201ENST00000425850 DNMBPQ6XZF7 1577 aa15.9■□□□□ 0.14
AC116609.1-201ENST00000425850 CLASP1Q7Z460 1538 aa15.87■□□□□ 0.13
AC116609.1-201ENST00000425850 SYNJ1O43426 1573 aa15.8■□□□□ 0.12
AC116609.1-201ENST00000425850 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
AC116609.1-201ENST00000425850 SNAPC4Q5SXM2 1469 aa15.76■□□□□ 0.11
AC116609.1-201ENST00000425850 CHMP7Q8WUX9 453 aaPredicted RBP15.75■□□□□ 0.11
AC116609.1-201ENST00000425850 WDR97A6NE52 1622 aa15.75■□□□□ 0.11
AC116609.1-201ENST00000425850 TDRD9Q8NDG6 1382 aaKnown RBP15.75■□□□□ 0.11
AC116609.1-201ENST00000425850 GAPVD1Q14C86 1478 aa15.74■□□□□ 0.11
AC116609.1-201ENST00000425850 NPM3O75607 178 aaKnown RBP15.74■□□□□ 0.11
AC116609.1-201ENST00000425850 RAD54L2Q9Y4B4 1467 aa15.73■□□□□ 0.11
AC116609.1-201ENST00000425850 MAGI1Q96QZ7 1491 aaPredicted RBP15.72■□□□□ 0.11
AC116609.1-201ENST00000425850 SOGA1O94964 1423 aa15.71■□□□□ 0.11
AC116609.1-201ENST00000425850 RNF216Q9NWF9 866 aaPredicted RBP15.7■□□□□ 0.1
AC116609.1-201ENST00000425850 SYNJ2O15056 1496 aa15.67■□□□□ 0.1
AC116609.1-201ENST00000425850 ILDR1Q86SU0 546 aaPredicted RBP15.65■□□□□ 0.1
AC116609.1-201ENST00000425850 GRIN2BQ13224 1484 aa15.65■□□□□ 0.1
AC116609.1-201ENST00000425850 HOXD11P31277 338 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms