RNA–Protein interactions for RNA: ENST00000424244.1

AC034228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC034228.1, Length 923 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC034228.1-201ENST00000424244 AEBP2Q6ZN18 517 aaPredicted RBP21.76■■□□□ 1.07
AC034228.1-201ENST00000424244 CHIC1Q5VXU3 224 aa21.5■■□□□ 1.03
AC034228.1-201ENST00000424244 NISCHQ9Y2I1 1504 aa20.88■□□□□ 0.93
AC034228.1-201ENST00000424244 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
AC034228.1-201ENST00000424244 CCDC180Q9P1Z9 1646 aa18.84■□□□□ 0.61
AC034228.1-201ENST00000424244 ABCC9O60706 1549 aa18.84■□□□□ 0.61
AC034228.1-201ENST00000424244 SENP3Q9H4L4 574 aaPredicted RBP18.27■□□□□ 0.52
AC034228.1-201ENST00000424244 RB1CC1Q8TDY2 1594 aa17.97■□□□□ 0.47
AC034228.1-201ENST00000424244 NACADO15069 1562 aa17.81■□□□□ 0.44
AC034228.1-201ENST00000424244 DCAF8L2P0C7V8 631 aa17.71■□□□□ 0.43
AC034228.1-201ENST00000424244 DNAJC5BQ9UF47 199 aa17.61■□□□□ 0.41
AC034228.1-201ENST00000424244 PLPPR3Q6T4P5 718 aa17.54■□□□□ 0.4
AC034228.1-201ENST00000424244 MYO15BQ96JP2 1530 aa17.52■□□□□ 0.4
AC034228.1-201ENST00000424244 UNC13AQ9UPW8 1703 aa17.5■□□□□ 0.39
AC034228.1-201ENST00000424244 PABPN1Q86U42 306 aaKnown RBP eCLIP17.5■□□□□ 0.39
AC034228.1-201ENST00000424244 BICRAQ9NZM4 1560 aa17.33■□□□□ 0.37
AC034228.1-201ENST00000424244 ZCCHC6Q5VYS8 1495 aaKnown RBP17.29■□□□□ 0.36
AC034228.1-201ENST00000424244 DCAF1Q9Y4B6 1507 aa17.26■□□□□ 0.35
AC034228.1-201ENST00000424244 SHROOM4Q9ULL8 1493 aa17.23■□□□□ 0.35
AC034228.1-201ENST00000424244 SCRIBQ14160 1630 aa17.12■□□□□ 0.33
AC034228.1-201ENST00000424244 CC2D2AQ9P2K1 1620 aa17.03■□□□□ 0.32
AC034228.1-201ENST00000424244 FOXD1Q16676 465 aa17.01■□□□□ 0.31
AC034228.1-201ENST00000424244 CECR2Q9BXF3 1484 aa17■□□□□ 0.31
AC034228.1-201ENST00000424244 EIF4G1Q04637 1599 aaKnown RBP16.98■□□□□ 0.31
AC034228.1-201ENST00000424244 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
AC034228.1-201ENST00000424244 ADRA2BP18089 450 aa16.63■□□□□ 0.25
AC034228.1-201ENST00000424244 NCAPD3P42695 1498 aa16.4■□□□□ 0.22
AC034228.1-201ENST00000424244 ERCC6Q03468 1493 aa16.35■□□□□ 0.21
AC034228.1-201ENST00000424244 SMARCA2P51531 1590 aa16.35■□□□□ 0.21
AC034228.1-201ENST00000424244 DNAJC5Q9H3Z4 198 aa16.33■□□□□ 0.2
AC034228.1-201ENST00000424244 ATAD2BQ9ULI0 1458 aa16.33■□□□□ 0.2
AC034228.1-201ENST00000424244 CUX2O14529 1486 aa16.32■□□□□ 0.2
AC034228.1-201ENST00000424244 SMARCA4P51532 1647 aa16.32■□□□□ 0.2
AC034228.1-201ENST00000424244 HMGXB3Q12766 1538 aa16.3■□□□□ 0.2
AC034228.1-201ENST00000424244 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
AC034228.1-201ENST00000424244 BAZ1BQ9UIG0 1483 aaKnown RBP16.22■□□□□ 0.19
AC034228.1-201ENST00000424244 PEG3Q9GZU2 1588 aa16.16■□□□□ 0.18
AC034228.1-201ENST00000424244 NESP48681 1621 aa16.12■□□□□ 0.17
AC034228.1-201ENST00000424244 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
AC034228.1-201ENST00000424244 MROH2BQ7Z745 1585 aa16.05■□□□□ 0.16
AC034228.1-201ENST00000424244 PIAS4Q8N2W9 510 aaPredicted RBP16.04■□□□□ 0.16
AC034228.1-201ENST00000424244 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.15
AC034228.1-201ENST00000424244 THOC2Q8NI27 1593 aaKnown RBP16.01■□□□□ 0.15
AC034228.1-201ENST00000424244 KIF21AQ7Z4S6 1674 aa15.98■□□□□ 0.15
AC034228.1-201ENST00000424244 CADPSQ9ULU8 1353 aa15.91■□□□□ 0.14
AC034228.1-201ENST00000424244 WIZO95785 1651 aa15.88■□□□□ 0.13
AC034228.1-201ENST00000424244 MRC2Q9UBG0 1479 aa15.85■□□□□ 0.13
AC034228.1-201ENST00000424244 WDR62O43379 1518 aa15.79■□□□□ 0.12
AC034228.1-201ENST00000424244 CEP164Q9UPV0 1460 aa15.79■□□□□ 0.12
AC034228.1-201ENST00000424244 FANCD2Q9BXW9 1451 aa15.73■□□□□ 0.11
AC034228.1-201ENST00000424244 TOP2AP11388 1531 aaKnown RBP15.71■□□□□ 0.11
AC034228.1-201ENST00000424244 CFTRP13569 1480 aa15.7■□□□□ 0.1
AC034228.1-201ENST00000424244 RSF1Q96T23 1441 aaPredicted RBP15.69■□□□□ 0.1
AC034228.1-201ENST00000424244 TRIM41Q8WV44 630 aa15.63■□□□□ 0.09
AC034228.1-201ENST00000424244 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
AC034228.1-201ENST00000424244 KCNA4P22459 653 aa15.59■□□□□ 0.09
AC034228.1-201ENST00000424244 URB2Q14146 1524 aaKnown RBP15.57■□□□□ 0.08
AC034228.1-201ENST00000424244 OSCARQ8IYS5 282 aa15.56■□□□□ 0.08
AC034228.1-201ENST00000424244 PPP4R3CPQ6ZMV5 832 aa15.54■□□□□ 0.08
AC034228.1-201ENST00000424244 CCDC88BA6NC98 1476 aa15.49■□□□□ 0.07
AC034228.1-201ENST00000424244 IFT140Q96RY7 1462 aa15.47■□□□□ 0.07
AC034228.1-201ENST00000424244 ABCC8Q09428 1581 aa15.46■□□□□ 0.07
AC034228.1-201ENST00000424244 MSH5O43196 834 aa15.45■□□□□ 0.06
AC034228.1-201ENST00000424244 TOPBP1Q92547 1522 aa15.42■□□□□ 0.06
AC034228.1-201ENST00000424244 DNMBPQ6XZF7 1577 aa15.39■□□□□ 0.05
AC034228.1-201ENST00000424244 ZNF608Q9ULD9 1512 aaPredicted RBP15.38■□□□□ 0.05
AC034228.1-201ENST00000424244 EIF4G3O43432 1585 aaKnown RBP15.35■□□□□ 0.05
AC034228.1-201ENST00000424244 RIMBP3CA6NJZ7 1639 aa15.33■□□□□ 0.04
AC034228.1-201ENST00000424244 RIMBP3BA6NNM3 1639 aa15.33■□□□□ 0.04
AC034228.1-201ENST00000424244 RIMBP3Q9UFD9 1639 aa15.33■□□□□ 0.04
AC034228.1-201ENST00000424244 ARHGEF11O15085 1522 aa15.27■□□□□ 0.04
AC034228.1-201ENST00000424244 TARBP1Q13395 1621 aaKnown RBP15.27■□□□□ 0.03
AC034228.1-201ENST00000424244 POLA1P09884 1462 aaPredicted RBP15.26■□□□□ 0.03
AC034228.1-201ENST00000424244 CHD1O14646 1710 aa15.26■□□□□ 0.03
AC034228.1-201ENST00000424244 AQRO60306 1485 aaKnown RBP eCLIP15.25■□□□□ 0.03
AC034228.1-201ENST00000424244 FBLN2P98095 1184 aa15.24■□□□□ 0.03
AC034228.1-201ENST00000424244 WDR97A6NE52 1622 aa15.21■□□□□ 0.02
AC034228.1-201ENST00000424244 SOGA1O94964 1423 aa15.2■□□□□ 0.02
AC034228.1-201ENST00000424244 CYB5RLQ6IPT4 315 aa15.18■□□□□ 0.02
AC034228.1-201ENST00000424244 RAD54L2Q9Y4B4 1467 aa15.17■□□□□ 0.02
AC034228.1-201ENST00000424244 FGD5Q6ZNL6 1462 aa15.15■□□□□ 0.02
AC034228.1-201ENST00000424244 TDRD9Q8NDG6 1382 aaKnown RBP15.15■□□□□ 0.02
AC034228.1-201ENST00000424244 NCBP3Q53F19 620 aaKnown RBP15.13■□□□□ 0.01
AC034228.1-201ENST00000424244 CHMP7Q8WUX9 453 aaPredicted RBP15.12■□□□□ 0.01
AC034228.1-201ENST00000424244 SNAPC4Q5SXM2 1469 aa15.12■□□□□ 0.01
AC034228.1-201ENST00000424244 MAGI1Q96QZ7 1491 aaPredicted RBP15.12■□□□□ 0.01
AC034228.1-201ENST00000424244 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
AC034228.1-201ENST00000424244 GRIN2BQ13224 1484 aa15.1■□□□□ 0.01
AC034228.1-201ENST00000424244 CUX1P39880 1505 aa15.1■□□□□ 0.01
AC034228.1-201ENST00000424244 ARAP1Q96P48 1450 aa15.09■□□□□ 0.01
AC034228.1-201ENST00000424244 TRHP20396 242 aaPredicted RBP15.09■□□□□ 0.01
AC034228.1-201ENST00000424244 SCAF1Q9H7N4 1312 aaKnown RBP15.07■□□□□ 0
AC034228.1-201ENST00000424244 SYNJ2O15056 1496 aa15.05■□□□□ -0
AC034228.1-201ENST00000424244 PBRM1Q86U86 1689 aa15.04■□□□□ -0
AC034228.1-201ENST00000424244 CLASP1Q7Z460 1538 aa15.04■□□□□ -0
AC034228.1-201ENST00000424244 NPM3O75607 178 aaKnown RBP15.03■□□□□ -0
AC034228.1-201ENST00000424244 GAPVD1Q14C86 1478 aa15.02■□□□□ -0
AC034228.1-201ENST00000424244 MAPK8IP2Q13387 824 aaPredicted RBP15.02■□□□□ -0
AC034228.1-201ENST00000424244 SUPT5HO00267 1087 aaKnown RBP15.01□□□□□ -0.01
AC034228.1-201ENST00000424244 CNKSR2Q8WXI2 1034 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms