RNA–Protein interactions for RNA: ENST00000419957.6

LINC01277-201, Transcript of long intergenic non-protein coding RNA 1277, humanhuman

TSL 2 BASIC

Gene LINC01277, Length 2,398 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01277-201ENST00000419957 POTEDQ86YR6 584 aa13.32□□□□□ -0.28
LINC01277-201ENST00000419957 AEBP2Q6ZN18 517 aaPredicted RBP12.31□□□□□ -0.44
LINC01277-201ENST00000419957 CHIC1Q5VXU3 224 aa11.81□□□□□ -0.52
LINC01277-201ENST00000419957 SENP3Q9H4L4 574 aaPredicted RBP11.09□□□□□ -0.63
LINC01277-201ENST00000419957 NISCHQ9Y2I1 1504 aa11.08□□□□□ -0.64
LINC01277-201ENST00000419957 MSH5O43196 834 aa10.66□□□□□ -0.7
LINC01277-201ENST00000419957 PHF23Q9BUL5 403 aaPredicted RBP10.57□□□□□ -0.72
LINC01277-201ENST00000419957 FOXD1Q16676 465 aa10.37□□□□□ -0.75
LINC01277-201ENST00000419957 CACNB1Q02641 598 aaPredicted RBP10.21□□□□□ -0.77
LINC01277-201ENST00000419957 POTEHQ6S545 545 aa10.13□□□□□ -0.79
LINC01277-201ENST00000419957 HRCP23327 699 aa9.77□□□□□ -0.85
LINC01277-201ENST00000419957 SHROOM4Q9ULL8 1493 aa9.54□□□□□ -0.88
LINC01277-201ENST00000419957 PELP1Q8IZL8 1130 aaKnown RBP9.54□□□□□ -0.88
LINC01277-201ENST00000419957 SUPT5HO00267 1087 aaKnown RBP9.53□□□□□ -0.88
LINC01277-201ENST00000419957 MYO15BQ96JP2 1530 aa9.48□□□□□ -0.89
LINC01277-201ENST00000419957 PCGF6Q9BYE7 350 aa9.47□□□□□ -0.89
LINC01277-201ENST00000419957 DCAF1Q9Y4B6 1507 aa9.46□□□□□ -0.89
LINC01277-201ENST00000419957 ZCCHC6Q5VYS8 1495 aaKnown RBP9.44□□□□□ -0.9
LINC01277-201ENST00000419957 PPARGC1BQ86YN6 1023 aaKnown RBP9.38□□□□□ -0.91
LINC01277-201ENST00000419957 CCDC180Q9P1Z9 1646 aa9.33□□□□□ -0.92
LINC01277-201ENST00000419957 PIAS4Q8N2W9 510 aaPredicted RBP9.32□□□□□ -0.92
LINC01277-201ENST00000419957 ZEB1P37275 1124 aaPredicted RBP9.31□□□□□ -0.92
LINC01277-201ENST00000419957 TRIM26Q12899 539 aaPredicted RBP9.3□□□□□ -0.92
LINC01277-201ENST00000419957 MYT1Q01538 1121 aa9.23□□□□□ -0.93
LINC01277-201ENST00000419957 PLSCR2Q9NRY7 297 aa9.16□□□□□ -0.94
LINC01277-201ENST00000419957 SCAF1Q9H7N4 1312 aaKnown RBP9.14□□□□□ -0.95
LINC01277-201ENST00000419957 LOC105371045A0A1W2PR82 267 aa9.14□□□□□ -0.95
LINC01277-201ENST00000419957 ACIN1Q9UKV3 1341 aaKnown RBP9□□□□□ -0.97
LINC01277-201ENST00000419957 ABCC9O60706 1549 aa8.97□□□□□ -0.97
LINC01277-201ENST00000419957 DCAF8L2P0C7V8 631 aa8.97□□□□□ -0.97
LINC01277-201ENST00000419957 CENPBP07199 599 aaPredicted RBP8.95□□□□□ -0.98
LINC01277-201ENST00000419957 TRIM41Q8WV44 630 aa8.92□□□□□ -0.98
LINC01277-201ENST00000419957 NEUROD1Q13562 356 aa8.91□□□□□ -0.98
LINC01277-201ENST00000419957 RSF1Q96T23 1441 aaPredicted RBP8.87□□□□□ -0.99
LINC01277-201ENST00000419957 GTF3C3Q9Y5Q9 886 aa8.86□□□□□ -0.99
LINC01277-201ENST00000419957 RB1CC1Q8TDY2 1594 aa8.86□□□□□ -0.99
LINC01277-201ENST00000419957 DIEXFQ68CQ4 756 aaKnown RBP8.84□□□□□ -0.99
LINC01277-201ENST00000419957 CCER1Q8TC90 406 aaPredicted RBP8.83□□□□□ -1
LINC01277-201ENST00000419957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.77□□□□□ -1.01
LINC01277-201ENST00000419957 FAM9AQ8IZU1 332 aaPredicted RBP8.77□□□□□ -1.01
LINC01277-201ENST00000419957 RNF39Q9H2S5 420 aa8.76□□□□□ -1.01
LINC01277-201ENST00000419957 WRNQ14191 1432 aaPredicted RBP eCLIP8.75□□□□□ -1.01
LINC01277-201ENST00000419957 ZNF316A6NFI3 1004 aaPredicted RBP8.71□□□□□ -1.01
LINC01277-201ENST00000419957 CLSPNQ9HAW4 1339 aa8.69□□□□□ -1.02
LINC01277-201ENST00000419957 SCRIBQ14160 1630 aa8.68□□□□□ -1.02
LINC01277-201ENST00000419957 TTBK1Q5TCY1 1321 aaPredicted RBP8.68□□□□□ -1.02
LINC01277-201ENST00000419957 C1QBPQ07021 282 aaKnown RBP8.67□□□□□ -1.02
LINC01277-201ENST00000419957 SP7Q8TDD2 431 aaPredicted RBP8.65□□□□□ -1.02
LINC01277-201ENST00000419957 EIF4G1Q04637 1599 aaKnown RBP8.62□□□□□ -1.03
LINC01277-201ENST00000419957 EHMT2Q96KQ7 1210 aa8.62□□□□□ -1.03
LINC01277-201ENST00000419957 CEP162Q5TB80 1403 aa8.6□□□□□ -1.03
LINC01277-201ENST00000419957 TNIKQ9UKE5 1360 aa8.6□□□□□ -1.03
LINC01277-201ENST00000419957 EEA1Q15075 1411 aa8.59□□□□□ -1.03
LINC01277-201ENST00000419957 MROH2BQ7Z745 1585 aa8.59□□□□□ -1.03
LINC01277-201ENST00000419957 BAZ1AQ9NRL2 1556 aaPredicted RBP8.59□□□□□ -1.03
LINC01277-201ENST00000419957 MIER1Q8N108 512 aa8.57□□□□□ -1.04
LINC01277-201ENST00000419957 YTHDC1Q96MU7 727 aaKnown RBP8.57□□□□□ -1.04
LINC01277-201ENST00000419957 CECR2Q9BXF3 1484 aa8.56□□□□□ -1.04
LINC01277-201ENST00000419957 WIZO95785 1651 aa8.54□□□□□ -1.04
LINC01277-201ENST00000419957 NACADO15069 1562 aa8.54□□□□□ -1.04
LINC01277-201ENST00000419957 PLPPR3Q6T4P5 718 aa8.49□□□□□ -1.05
LINC01277-201ENST00000419957 CCDC88BA6NC98 1476 aa8.49□□□□□ -1.05
LINC01277-201ENST00000419957 GOLGA3Q08378 1498 aa8.49□□□□□ -1.05
LINC01277-201ENST00000419957 ANP32EQ9BTT0 268 aa8.49□□□□□ -1.05
LINC01277-201ENST00000419957 SUPT16HQ9Y5B9 1047 aaKnown RBP8.48□□□□□ -1.05
LINC01277-201ENST00000419957 TOP2AP11388 1531 aaKnown RBP8.48□□□□□ -1.05
LINC01277-201ENST00000419957 CSRNP3Q8WYN3 585 aa8.48□□□□□ -1.05
LINC01277-201ENST00000419957 SOGA1O94964 1423 aa8.45□□□□□ -1.06
LINC01277-201ENST00000419957 ABCC8Q09428 1581 aa8.45□□□□□ -1.06
LINC01277-201ENST00000419957 DMRT2Q9Y5R5 561 aa8.44□□□□□ -1.06
LINC01277-201ENST00000419957 UBTFP17480 764 aaKnown RBP8.43□□□□□ -1.06
LINC01277-201ENST00000419957 TSHZ2Q9NRE2 1034 aa8.43□□□□□ -1.06
LINC01277-201ENST00000419957 SMARCA2P51531 1590 aa8.42□□□□□ -1.06
LINC01277-201ENST00000419957 CEP164Q9UPV0 1460 aa8.42□□□□□ -1.06
LINC01277-201ENST00000419957 KIF21BO75037 1637 aa8.42□□□□□ -1.06
LINC01277-201ENST00000419957 VPS8Q8N3P4 1428 aa8.41□□□□□ -1.06
LINC01277-201ENST00000419957 HNRNPUL2Q1KMD3 747 aaKnown RBP8.4□□□□□ -1.06
LINC01277-201ENST00000419957 BCL11AQ9H165 835 aa8.4□□□□□ -1.07
LINC01277-201ENST00000419957 BAZ1BQ9UIG0 1483 aaKnown RBP8.39□□□□□ -1.07
LINC01277-201ENST00000419957 CLIP1P30622 1438 aa8.38□□□□□ -1.07
LINC01277-201ENST00000419957 APLP2Q06481 763 aa8.37□□□□□ -1.07
LINC01277-201ENST00000419957 SMARCA4P51532 1647 aa8.37□□□□□ -1.07
LINC01277-201ENST00000419957 RUSC2Q8N2Y8 1516 aa8.36□□□□□ -1.07
LINC01277-201ENST00000419957 DHX57Q6P158 1386 aaKnown RBP8.35□□□□□ -1.07
LINC01277-201ENST00000419957 CUX2O14529 1486 aa8.31□□□□□ -1.08
LINC01277-201ENST00000419957 RRBP1Q9P2E9 1410 aaKnown RBP8.27□□□□□ -1.09
LINC01277-201ENST00000419957 NEFLP07196 543 aa8.26□□□□□ -1.09
LINC01277-201ENST00000419957 SYNJ1O43426 1573 aa8.25□□□□□ -1.09
LINC01277-201ENST00000419957 RAPGEF2Q9Y4G8 1499 aa8.25□□□□□ -1.09
LINC01277-201ENST00000419957 RBM19Q9Y4C8 960 aaKnown RBP8.25□□□□□ -1.09
LINC01277-201ENST00000419957 ERICH3Q5RHP9 1530 aa8.24□□□□□ -1.09
LINC01277-201ENST00000419957 PEG3Q9GZU2 1588 aa8.24□□□□□ -1.09
LINC01277-201ENST00000419957 FKBP8Q14318 412 aa8.24□□□□□ -1.09
LINC01277-201ENST00000419957 MYT1LQ9UL68 1186 aa8.24□□□□□ -1.09
LINC01277-201ENST00000419957 CCER2I3L3R5 266 aa8.21□□□□□ -1.09
LINC01277-201ENST00000419957 DCAF8L1A6NGE4 600 aa8.21□□□□□ -1.1
LINC01277-201ENST00000419957 FANCIQ9NVI1 1328 aa8.2□□□□□ -1.1
LINC01277-201ENST00000419957 TIMELESSQ9UNS1 1208 aa8.2□□□□□ -1.1
LINC01277-201ENST00000419957 ARAP1Q96P48 1450 aa8.2□□□□□ -1.1
LINC01277-201ENST00000419957 CCNB3Q8WWL7 1395 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms