RNA–Protein interactions for RNA: ENST00000409897.5

SP100-206, Transcript of SP100 nuclear antigen, humanhuman

TSL 2 BASIC

Gene SP100, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP100-206ENST00000409897 NISCHQ9Y2I1 1504 aa22.53■■□□□ 1.2
SP100-206ENST00000409897 CCDC180Q9P1Z9 1646 aa20.14■□□□□ 0.81
SP100-206ENST00000409897 ABCC9O60706 1549 aa20.11■□□□□ 0.81
SP100-206ENST00000409897 SLC24A1O60721 1099 aa19.78■□□□□ 0.76
SP100-206ENST00000409897 CHIC1Q5VXU3 224 aa19.71■□□□□ 0.75
SP100-206ENST00000409897 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
SP100-206ENST00000409897 NACADO15069 1562 aa19.04■□□□□ 0.64
SP100-206ENST00000409897 DCAF8L2P0C7V8 631 aa19.02■□□□□ 0.64
SP100-206ENST00000409897 DNAJC5BQ9UF47 199 aa18.83■□□□□ 0.61
SP100-206ENST00000409897 MYO15BQ96JP2 1530 aa18.8■□□□□ 0.6
SP100-206ENST00000409897 PABPN1Q86U42 306 aaKnown RBP eCLIP18.77■□□□□ 0.6
SP100-206ENST00000409897 EHMT2Q96KQ7 1210 aa18.77■□□□□ 0.6
SP100-206ENST00000409897 UNC13AQ9UPW8 1703 aa18.71■□□□□ 0.59
SP100-206ENST00000409897 ZCCHC6Q5VYS8 1495 aaKnown RBP18.68■□□□□ 0.58
SP100-206ENST00000409897 BICRAQ9NZM4 1560 aa18.61■□□□□ 0.57
SP100-206ENST00000409897 DCAF1Q9Y4B6 1507 aa18.6■□□□□ 0.57
SP100-206ENST00000409897 AEBP2Q6ZN18 517 aaPredicted RBP18.45■□□□□ 0.54
SP100-206ENST00000409897 SCRIBQ14160 1630 aa18.39■□□□□ 0.53
SP100-206ENST00000409897 SHROOM4Q9ULL8 1493 aa18.33■□□□□ 0.52
SP100-206ENST00000409897 CC2D2AQ9P2K1 1620 aa18.16■□□□□ 0.5
SP100-206ENST00000409897 PLPPR3Q6T4P5 718 aa18.14■□□□□ 0.49
SP100-206ENST00000409897 EIF4G1Q04637 1599 aaKnown RBP18.14■□□□□ 0.49
SP100-206ENST00000409897 CECR2Q9BXF3 1484 aa18.1■□□□□ 0.49
SP100-206ENST00000409897 RTN4Q9NQC3 1192 aaKnown RBP17.99■□□□□ 0.47
SP100-206ENST00000409897 PHF23Q9BUL5 403 aaPredicted RBP17.78■□□□□ 0.44
SP100-206ENST00000409897 DAXXQ9UER7 740 aaPredicted RBP17.72■□□□□ 0.43
SP100-206ENST00000409897 NCBP3Q53F19 620 aaKnown RBP17.65■□□□□ 0.42
SP100-206ENST00000409897 AMER1Q5JTC6 1135 aaPredicted RBP17.61■□□□□ 0.41
SP100-206ENST00000409897 NCAPD3P42695 1498 aa17.6■□□□□ 0.41
SP100-206ENST00000409897 ATAD2BQ9ULI0 1458 aa17.56■□□□□ 0.4
SP100-206ENST00000409897 SMARCA4P51532 1647 aa17.54■□□□□ 0.4
SP100-206ENST00000409897 CSRNP3Q8WYN3 585 aa17.51■□□□□ 0.39
SP100-206ENST00000409897 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
SP100-206ENST00000409897 KCNA4P22459 653 aa17.49■□□□□ 0.39
SP100-206ENST00000409897 BAZ1AQ9NRL2 1556 aaPredicted RBP17.47■□□□□ 0.39
SP100-206ENST00000409897 HMGXB3Q12766 1538 aa17.45■□□□□ 0.38
SP100-206ENST00000409897 BAZ1BQ9UIG0 1483 aaKnown RBP17.38■□□□□ 0.37
SP100-206ENST00000409897 MROH2BQ7Z745 1585 aa17.37■□□□□ 0.37
SP100-206ENST00000409897 PEG3Q9GZU2 1588 aa17.37■□□□□ 0.37
SP100-206ENST00000409897 ERCC6Q03468 1493 aa17.33■□□□□ 0.37
SP100-206ENST00000409897 NESP48681 1621 aa17.31■□□□□ 0.36
SP100-206ENST00000409897 CUX2O14529 1486 aa17.27■□□□□ 0.36
SP100-206ENST00000409897 DNAJC5Q9H3Z4 198 aa17.21■□□□□ 0.35
SP100-206ENST00000409897 LAMC3Q9Y6N6 1575 aa17.17■□□□□ 0.34
SP100-206ENST00000409897 WIZO95785 1651 aa17.16■□□□□ 0.34
SP100-206ENST00000409897 PRKCSHP14314 528 aaPredicted RBP17.15■□□□□ 0.34
SP100-206ENST00000409897 PDS5BQ9NTI5 1447 aa17.08■□□□□ 0.32
SP100-206ENST00000409897 THOC2Q8NI27 1593 aaKnown RBP17.08■□□□□ 0.32
SP100-206ENST00000409897 CADPSQ9ULU8 1353 aa17.07■□□□□ 0.32
SP100-206ENST00000409897 RSF1Q96T23 1441 aaPredicted RBP17.05■□□□□ 0.32
SP100-206ENST00000409897 KIF21AQ7Z4S6 1674 aa17.05■□□□□ 0.32
SP100-206ENST00000409897 TOP2AP11388 1531 aaKnown RBP16.93■□□□□ 0.3
SP100-206ENST00000409897 MRC2Q9UBG0 1479 aa16.93■□□□□ 0.3
SP100-206ENST00000409897 CFTRP13569 1480 aa16.89■□□□□ 0.29
SP100-206ENST00000409897 FANCD2Q9BXW9 1451 aa16.87■□□□□ 0.29
SP100-206ENST00000409897 CEP164Q9UPV0 1460 aa16.87■□□□□ 0.29
SP100-206ENST00000409897 WDR62O43379 1518 aa16.87■□□□□ 0.29
SP100-206ENST00000409897 ARXQ96QS3 562 aa16.84■□□□□ 0.29
SP100-206ENST00000409897 CCDC88BA6NC98 1476 aa16.77■□□□□ 0.28
SP100-206ENST00000409897 TIMELESSQ9UNS1 1208 aa16.74■□□□□ 0.27
SP100-206ENST00000409897 URB2Q14146 1524 aaKnown RBP16.73■□□□□ 0.27
SP100-206ENST00000409897 PRDM2Q13029 1718 aa16.67■□□□□ 0.26
SP100-206ENST00000409897 SLC4A1APQ9BWU0 796 aaKnown RBP16.67■□□□□ 0.26
SP100-206ENST00000409897 TAOK2Q9UL54 1235 aa16.63■□□□□ 0.25
SP100-206ENST00000409897 TOPBP1Q92547 1522 aa16.56■□□□□ 0.24
SP100-206ENST00000409897 IFT140Q96RY7 1462 aa16.54■□□□□ 0.24
SP100-206ENST00000409897 APLP2Q06481 763 aa16.53■□□□□ 0.24
SP100-206ENST00000409897 OSCARQ8IYS5 282 aa16.53■□□□□ 0.24
SP100-206ENST00000409897 ABCC8Q09428 1581 aa16.52■□□□□ 0.24
SP100-206ENST00000409897 ZNF608Q9ULD9 1512 aaPredicted RBP16.52■□□□□ 0.23
SP100-206ENST00000409897 TULP1O00294 542 aaPredicted RBP16.51■□□□□ 0.23
SP100-206ENST00000409897 TRIM41Q8WV44 630 aa16.5■□□□□ 0.23
SP100-206ENST00000409897 DNMBPQ6XZF7 1577 aa16.49■□□□□ 0.23
SP100-206ENST00000409897 TTBK1Q5TCY1 1321 aaPredicted RBP16.49■□□□□ 0.23
SP100-206ENST00000409897 BCANQ96GW7 911 aa16.45■□□□□ 0.22
SP100-206ENST00000409897 PELP1Q8IZL8 1130 aaKnown RBP16.41■□□□□ 0.22
SP100-206ENST00000409897 TARBP1Q13395 1621 aaKnown RBP16.4■□□□□ 0.22
SP100-206ENST00000409897 POLA1P09884 1462 aaPredicted RBP16.4■□□□□ 0.22
SP100-206ENST00000409897 EIF4G3O43432 1585 aaKnown RBP16.4■□□□□ 0.22
SP100-206ENST00000409897 AQRO60306 1485 aaKnown RBP eCLIP16.39■□□□□ 0.21
SP100-206ENST00000409897 SUPT5HO00267 1087 aaKnown RBP16.38■□□□□ 0.21
SP100-206ENST00000409897 TPRNQ4KMQ1 711 aa16.36■□□□□ 0.21
SP100-206ENST00000409897 RAD54L2Q9Y4B4 1467 aa16.35■□□□□ 0.21
SP100-206ENST00000409897 SOGA1O94964 1423 aa16.34■□□□□ 0.21
SP100-206ENST00000409897 HOMEZQ8IX15 550 aa16.32■□□□□ 0.2
SP100-206ENST00000409897 CUX1P39880 1505 aa16.31■□□□□ 0.2
SP100-206ENST00000409897 FGD5Q6ZNL6 1462 aa16.31■□□□□ 0.2
SP100-206ENST00000409897 TDRD9Q8NDG6 1382 aaKnown RBP16.3■□□□□ 0.2
SP100-206ENST00000409897 RANGAP1P46060 587 aaPredicted RBP16.29■□□□□ 0.2
SP100-206ENST00000409897 RIMBP3CA6NJZ7 1639 aa16.28■□□□□ 0.2
SP100-206ENST00000409897 RIMBP3BA6NNM3 1639 aa16.28■□□□□ 0.2
SP100-206ENST00000409897 RIMBP3Q9UFD9 1639 aa16.28■□□□□ 0.2
SP100-206ENST00000409897 FBLN2P98095 1184 aa16.27■□□□□ 0.2
SP100-206ENST00000409897 ERICH6Q7L0X2 663 aa16.26■□□□□ 0.19
SP100-206ENST00000409897 CHD1O14646 1710 aa16.26■□□□□ 0.19
SP100-206ENST00000409897 ARHGEF11O15085 1522 aa16.24■□□□□ 0.19
SP100-206ENST00000409897 MYT1Q01538 1121 aa16.23■□□□□ 0.19
SP100-206ENST00000409897 PLCB2Q00722 1185 aa16.22■□□□□ 0.19
SP100-206ENST00000409897 WDR97A6NE52 1622 aa16.21■□□□□ 0.19
SP100-206ENST00000409897 SNAPC4Q5SXM2 1469 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms