RNA–Protein interactions for RNA: ENST00000394711.1

CLCA1-202, Transcript of chloride channel accessory 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCA1, Length 3,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1-202ENST00000394711 NISCHQ9Y2I1 1504 aa12.29□□□□□ -0.44
CLCA1-202ENST00000394711 CHIC1Q5VXU3 224 aa12.26□□□□□ -0.45
CLCA1-202ENST00000394711 AEBP2Q6ZN18 517 aaPredicted RBP12.05□□□□□ -0.48
CLCA1-202ENST00000394711 CCDC180Q9P1Z9 1646 aa11.17□□□□□ -0.62
CLCA1-202ENST00000394711 ABCC9O60706 1549 aa11.1□□□□□ -0.63
CLCA1-202ENST00000394711 PHF23Q9BUL5 403 aaPredicted RBP11.03□□□□□ -0.64
CLCA1-202ENST00000394711 SLC24A1O60721 1099 aa10.84□□□□□ -0.67
CLCA1-202ENST00000394711 RB1CC1Q8TDY2 1594 aa10.68□□□□□ -0.7
CLCA1-202ENST00000394711 NACADO15069 1562 aa10.6□□□□□ -0.71
CLCA1-202ENST00000394711 MYO15BQ96JP2 1530 aa10.48□□□□□ -0.73
CLCA1-202ENST00000394711 DNAJC5BQ9UF47 199 aa10.4□□□□□ -0.74
CLCA1-202ENST00000394711 DCAF8L2P0C7V8 631 aa10.37□□□□□ -0.75
CLCA1-202ENST00000394711 SHROOM4Q9ULL8 1493 aa10.34□□□□□ -0.75
CLCA1-202ENST00000394711 EHMT2Q96KQ7 1210 aa10.32□□□□□ -0.76
CLCA1-202ENST00000394711 PABPN1Q86U42 306 aaKnown RBP eCLIP10.28□□□□□ -0.76
CLCA1-202ENST00000394711 DCAF1Q9Y4B6 1507 aa10.26□□□□□ -0.77
CLCA1-202ENST00000394711 UNC13AQ9UPW8 1703 aa10.25□□□□□ -0.77
CLCA1-202ENST00000394711 PLPPR3Q6T4P5 718 aa10.24□□□□□ -0.77
CLCA1-202ENST00000394711 BICRAQ9NZM4 1560 aa10.21□□□□□ -0.78
CLCA1-202ENST00000394711 ZCCHC6Q5VYS8 1495 aaKnown RBP10.15□□□□□ -0.78
CLCA1-202ENST00000394711 CECR2Q9BXF3 1484 aa10.08□□□□□ -0.8
CLCA1-202ENST00000394711 CC2D2AQ9P2K1 1620 aa10.05□□□□□ -0.8
CLCA1-202ENST00000394711 EIF4G1Q04637 1599 aaKnown RBP10.03□□□□□ -0.8
CLCA1-202ENST00000394711 SCRIBQ14160 1630 aa9.99□□□□□ -0.81
CLCA1-202ENST00000394711 KCNA4P22459 653 aa9.96□□□□□ -0.82
CLCA1-202ENST00000394711 RTN4Q9NQC3 1192 aaKnown RBP9.9□□□□□ -0.82
CLCA1-202ENST00000394711 ADRA2BP18089 450 aa9.87□□□□□ -0.83
CLCA1-202ENST00000394711 SENP3Q9H4L4 574 aaPredicted RBP9.85□□□□□ -0.83
CLCA1-202ENST00000394711 DNAJC5Q9H3Z4 198 aa9.83□□□□□ -0.84
CLCA1-202ENST00000394711 CUX2O14529 1486 aa9.79□□□□□ -0.84
CLCA1-202ENST00000394711 NCAPD3P42695 1498 aa9.75□□□□□ -0.85
CLCA1-202ENST00000394711 SMARCA2P51531 1590 aa9.7□□□□□ -0.86
CLCA1-202ENST00000394711 ERCC6Q03468 1493 aa9.7□□□□□ -0.86
CLCA1-202ENST00000394711 CSRNP3Q8WYN3 585 aa9.7□□□□□ -0.86
CLCA1-202ENST00000394711 DAXXQ9UER7 740 aaPredicted RBP9.69□□□□□ -0.86
CLCA1-202ENST00000394711 HMGXB3Q12766 1538 aa9.67□□□□□ -0.86
CLCA1-202ENST00000394711 ATAD2BQ9ULI0 1458 aa9.64□□□□□ -0.87
CLCA1-202ENST00000394711 BAZ1AQ9NRL2 1556 aaPredicted RBP9.61□□□□□ -0.87
CLCA1-202ENST00000394711 SMARCA4P51532 1647 aa9.6□□□□□ -0.87
CLCA1-202ENST00000394711 NCBP3Q53F19 620 aaKnown RBP9.59□□□□□ -0.87
CLCA1-202ENST00000394711 PPP6R1Q9UPN7 881 aa9.58□□□□□ -0.88
CLCA1-202ENST00000394711 BAZ1BQ9UIG0 1483 aaKnown RBP9.58□□□□□ -0.88
CLCA1-202ENST00000394711 LAMC3Q9Y6N6 1575 aa9.57□□□□□ -0.88
CLCA1-202ENST00000394711 PEG3Q9GZU2 1588 aa9.56□□□□□ -0.88
CLCA1-202ENST00000394711 PRKCSHP14314 528 aaPredicted RBP9.56□□□□□ -0.88
CLCA1-202ENST00000394711 PDS5BQ9NTI5 1447 aa9.55□□□□□ -0.88
CLCA1-202ENST00000394711 SLC4A1APQ9BWU0 796 aaKnown RBP9.49□□□□□ -0.89
CLCA1-202ENST00000394711 AMER1Q5JTC6 1135 aaPredicted RBP9.46□□□□□ -0.89
CLCA1-202ENST00000394711 THOC2Q8NI27 1593 aaKnown RBP9.45□□□□□ -0.9
CLCA1-202ENST00000394711 NESP48681 1621 aa9.44□□□□□ -0.9
CLCA1-202ENST00000394711 CADPSQ9ULU8 1353 aa9.44□□□□□ -0.9
CLCA1-202ENST00000394711 MRC2Q9UBG0 1479 aa9.41□□□□□ -0.9
CLCA1-202ENST00000394711 MROH2BQ7Z745 1585 aa9.38□□□□□ -0.91
CLCA1-202ENST00000394711 KIF21AQ7Z4S6 1674 aa9.36□□□□□ -0.91
CLCA1-202ENST00000394711 WDR62O43379 1518 aa9.36□□□□□ -0.91
CLCA1-202ENST00000394711 CEP164Q9UPV0 1460 aa9.35□□□□□ -0.91
CLCA1-202ENST00000394711 OSCARQ8IYS5 282 aa9.31□□□□□ -0.92
CLCA1-202ENST00000394711 FANCD2Q9BXW9 1451 aa9.29□□□□□ -0.92
CLCA1-202ENST00000394711 CFTRP13569 1480 aa9.28□□□□□ -0.92
CLCA1-202ENST00000394711 TIMELESSQ9UNS1 1208 aa9.27□□□□□ -0.93
CLCA1-202ENST00000394711 TRIM41Q8WV44 630 aa9.27□□□□□ -0.93
CLCA1-202ENST00000394711 ABCC8Q09428 1581 aa9.25□□□□□ -0.93
CLCA1-202ENST00000394711 WIZO95785 1651 aa9.25□□□□□ -0.93
CLCA1-202ENST00000394711 TOP2AP11388 1531 aaKnown RBP9.24□□□□□ -0.93
CLCA1-202ENST00000394711 ZBTB22O15209 634 aa9.24□□□□□ -0.93
CLCA1-202ENST00000394711 FOXD1Q16676 465 aa9.24□□□□□ -0.93
CLCA1-202ENST00000394711 IFT140Q96RY7 1462 aa9.2□□□□□ -0.94
CLCA1-202ENST00000394711 PRDM2Q13029 1718 aa9.2□□□□□ -0.94
CLCA1-202ENST00000394711 PPP4R3CPQ6ZMV5 832 aa9.2□□□□□ -0.94
CLCA1-202ENST00000394711 RSF1Q96T23 1441 aaPredicted RBP9.19□□□□□ -0.94
CLCA1-202ENST00000394711 URB2Q14146 1524 aaKnown RBP9.15□□□□□ -0.94
CLCA1-202ENST00000394711 APLP2Q06481 763 aa9.14□□□□□ -0.95
CLCA1-202ENST00000394711 TULP1O00294 542 aaPredicted RBP9.13□□□□□ -0.95
CLCA1-202ENST00000394711 ARXQ96QS3 562 aa9.11□□□□□ -0.95
CLCA1-202ENST00000394711 WDR97A6NE52 1622 aa9.09□□□□□ -0.95
CLCA1-202ENST00000394711 TAOK2Q9UL54 1235 aa9.09□□□□□ -0.95
CLCA1-202ENST00000394711 DNMBPQ6XZF7 1577 aa9.09□□□□□ -0.95
CLCA1-202ENST00000394711 TOPBP1Q92547 1522 aa9.09□□□□□ -0.95
CLCA1-202ENST00000394711 NPM3O75607 178 aaKnown RBP9.08□□□□□ -0.96
CLCA1-202ENST00000394711 CCDC88BA6NC98 1476 aa9.08□□□□□ -0.96
CLCA1-202ENST00000394711 RIMBP3CA6NJZ7 1639 aa9.07□□□□□ -0.96
CLCA1-202ENST00000394711 RIMBP3BA6NNM3 1639 aa9.07□□□□□ -0.96
CLCA1-202ENST00000394711 RIMBP3Q9UFD9 1639 aa9.07□□□□□ -0.96
CLCA1-202ENST00000394711 ARHGEF11O15085 1522 aa9.05□□□□□ -0.96
CLCA1-202ENST00000394711 EIF4G3O43432 1585 aaKnown RBP9.02□□□□□ -0.97
CLCA1-202ENST00000394711 ZNF608Q9ULD9 1512 aaPredicted RBP9.02□□□□□ -0.97
CLCA1-202ENST00000394711 TARBP1Q13395 1621 aaKnown RBP8.99□□□□□ -0.97
CLCA1-202ENST00000394711 TPRNQ4KMQ1 711 aa8.99□□□□□ -0.97
CLCA1-202ENST00000394711 CYB5RLQ6IPT4 315 aa8.99□□□□□ -0.97
CLCA1-202ENST00000394711 SOGA1O94964 1423 aa8.99□□□□□ -0.97
CLCA1-202ENST00000394711 PELP1Q8IZL8 1130 aaKnown RBP8.98□□□□□ -0.97
CLCA1-202ENST00000394711 MAGI1Q96QZ7 1491 aaPredicted RBP8.98□□□□□ -0.97
CLCA1-202ENST00000394711 SYNJ1O43426 1573 aa8.97□□□□□ -0.97
CLCA1-202ENST00000394711 POLA1P09884 1462 aaPredicted RBP8.97□□□□□ -0.97
CLCA1-202ENST00000394711 TRHP20396 242 aaPredicted RBP8.97□□□□□ -0.97
CLCA1-202ENST00000394711 FBLN2P98095 1184 aa8.97□□□□□ -0.97
CLCA1-202ENST00000394711 ERICH6Q7L0X2 663 aa8.96□□□□□ -0.97
CLCA1-202ENST00000394711 CHMP7Q8WUX9 453 aaPredicted RBP8.96□□□□□ -0.97
CLCA1-202ENST00000394711 CHD1O14646 1710 aa8.96□□□□□ -0.98
CLCA1-202ENST00000394711 TTBK1Q5TCY1 1321 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms