RNA–Protein interactions for RNA: ENST00000370940.5

HHLA3-203, Transcript of HERV-H LTR-associating 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HHLA3, Length 775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-203ENST00000370940 CHIC1Q5VXU3 224 aa21.44■■□□□ 1.02
HHLA3-203ENST00000370940 AEBP2Q6ZN18 517 aaPredicted RBP21.22■□□□□ 0.99
HHLA3-203ENST00000370940 NISCHQ9Y2I1 1504 aa19.25■□□□□ 0.67
HHLA3-203ENST00000370940 PHF23Q9BUL5 403 aaPredicted RBP19■□□□□ 0.63
HHLA3-203ENST00000370940 SENP3Q9H4L4 574 aaPredicted RBP17.75■□□□□ 0.43
HHLA3-203ENST00000370940 PLPPR3Q6T4P5 718 aa17.72■□□□□ 0.43
HHLA3-203ENST00000370940 ABCC9O60706 1549 aa17.65■□□□□ 0.42
HHLA3-203ENST00000370940 CCDC180Q9P1Z9 1646 aa17.3■□□□□ 0.36
HHLA3-203ENST00000370940 POTEDQ86YR6 584 aa17.08■□□□□ 0.32
HHLA3-203ENST00000370940 DNAJC5BQ9UF47 199 aa16.83■□□□□ 0.28
HHLA3-203ENST00000370940 ADRA2BP18089 450 aa16.63■□□□□ 0.25
HHLA3-203ENST00000370940 RB1CC1Q8TDY2 1594 aa16.61■□□□□ 0.25
HHLA3-203ENST00000370940 FOXD1Q16676 465 aa16.52■□□□□ 0.24
HHLA3-203ENST00000370940 PPP6R1Q9UPN7 881 aa16.48■□□□□ 0.23
HHLA3-203ENST00000370940 PABPN1Q86U42 306 aaKnown RBP eCLIP16.45■□□□□ 0.22
HHLA3-203ENST00000370940 NACADO15069 1562 aa16.43■□□□□ 0.22
HHLA3-203ENST00000370940 DCAF8L2P0C7V8 631 aa16.43■□□□□ 0.22
HHLA3-203ENST00000370940 KCNA4P22459 653 aa16.31■□□□□ 0.2
HHLA3-203ENST00000370940 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
HHLA3-203ENST00000370940 BICRAQ9NZM4 1560 aa16.19■□□□□ 0.18
HHLA3-203ENST00000370940 MYO15BQ96JP2 1530 aa16.11■□□□□ 0.17
HHLA3-203ENST00000370940 EHMT2Q96KQ7 1210 aa16.08■□□□□ 0.16
HHLA3-203ENST00000370940 ZCCHC6Q5VYS8 1495 aaKnown RBP15.9■□□□□ 0.14
HHLA3-203ENST00000370940 CECR2Q9BXF3 1484 aa15.9■□□□□ 0.14
HHLA3-203ENST00000370940 CC2D2AQ9P2K1 1620 aa15.9■□□□□ 0.14
HHLA3-203ENST00000370940 SHROOM4Q9ULL8 1493 aa15.84■□□□□ 0.13
HHLA3-203ENST00000370940 SCRIBQ14160 1630 aa15.84■□□□□ 0.13
HHLA3-203ENST00000370940 DCAF1Q9Y4B6 1507 aa15.83■□□□□ 0.12
HHLA3-203ENST00000370940 EIF4G1Q04637 1599 aaKnown RBP15.79■□□□□ 0.12
HHLA3-203ENST00000370940 PPP4R3CPQ6ZMV5 832 aa15.73■□□□□ 0.11
HHLA3-203ENST00000370940 MSH5O43196 834 aa15.68■□□□□ 0.1
HHLA3-203ENST00000370940 CSRNP3Q8WYN3 585 aa15.63■□□□□ 0.09
HHLA3-203ENST00000370940 PIAS4Q8N2W9 510 aaPredicted RBP15.62■□□□□ 0.09
HHLA3-203ENST00000370940 SLC4A1APQ9BWU0 796 aaKnown RBP15.62■□□□□ 0.09
HHLA3-203ENST00000370940 DNAJC5Q9H3Z4 198 aa15.55■□□□□ 0.08
HHLA3-203ENST00000370940 NCBP3Q53F19 620 aaKnown RBP15.47■□□□□ 0.07
HHLA3-203ENST00000370940 NPM3O75607 178 aaKnown RBP15.36■□□□□ 0.05
HHLA3-203ENST00000370940 CUX2O14529 1486 aa15.23■□□□□ 0.03
HHLA3-203ENST00000370940 ERCC6Q03468 1493 aa15.22■□□□□ 0.03
HHLA3-203ENST00000370940 NCAPD3P42695 1498 aa15.2■□□□□ 0.02
HHLA3-203ENST00000370940 ATAD2BQ9ULI0 1458 aa15.15■□□□□ 0.02
HHLA3-203ENST00000370940 NESP48681 1621 aa15.11■□□□□ 0.01
HHLA3-203ENST00000370940 CNKSR2Q8WXI2 1034 aa15.1■□□□□ 0.01
HHLA3-203ENST00000370940 ZBTB22O15209 634 aa15.09■□□□□ 0.01
HHLA3-203ENST00000370940 SMARCA4P51532 1647 aa15.06■□□□□ 0
HHLA3-203ENST00000370940 SMARCA2P51531 1590 aa15.04■□□□□ -0
HHLA3-203ENST00000370940 HMGXB3Q12766 1538 aa15.04■□□□□ -0
HHLA3-203ENST00000370940 BAZ1BQ9UIG0 1483 aaKnown RBP14.98□□□□□ -0.01
HHLA3-203ENST00000370940 SCAF1Q9H7N4 1312 aaKnown RBP14.95□□□□□ -0.02
HHLA3-203ENST00000370940 THOC2Q8NI27 1593 aaKnown RBP14.94□□□□□ -0.02
HHLA3-203ENST00000370940 BAZ1AQ9NRL2 1556 aaPredicted RBP14.93□□□□□ -0.02
HHLA3-203ENST00000370940 PEG3Q9GZU2 1588 aa14.89□□□□□ -0.03
HHLA3-203ENST00000370940 LAMC3Q9Y6N6 1575 aa14.87□□□□□ -0.03
HHLA3-203ENST00000370940 MROH2BQ7Z745 1585 aa14.86□□□□□ -0.03
HHLA3-203ENST00000370940 KIF21AQ7Z4S6 1674 aa14.84□□□□□ -0.03
HHLA3-203ENST00000370940 TRIM41Q8WV44 630 aa14.82□□□□□ -0.04
HHLA3-203ENST00000370940 PDS5BQ9NTI5 1447 aa14.82□□□□□ -0.04
HHLA3-203ENST00000370940 CADPSQ9ULU8 1353 aa14.75□□□□□ -0.05
HHLA3-203ENST00000370940 FOXD4L1Q9NU39 408 aa14.74□□□□□ -0.05
HHLA3-203ENST00000370940 MRC2Q9UBG0 1479 aa14.71□□□□□ -0.05
HHLA3-203ENST00000370940 MAPK8IP2Q13387 824 aaPredicted RBP14.7□□□□□ -0.06
HHLA3-203ENST00000370940 WDR62O43379 1518 aa14.68□□□□□ -0.06
HHLA3-203ENST00000370940 WIZO95785 1651 aa14.66□□□□□ -0.06
HHLA3-203ENST00000370940 RNF216Q9NWF9 866 aaPredicted RBP14.62□□□□□ -0.07
HHLA3-203ENST00000370940 CEP164Q9UPV0 1460 aa14.61□□□□□ -0.07
HHLA3-203ENST00000370940 FANCD2Q9BXW9 1451 aa14.59□□□□□ -0.07
HHLA3-203ENST00000370940 OSCARQ8IYS5 282 aa14.54□□□□□ -0.08
HHLA3-203ENST00000370940 CFTRP13569 1480 aa14.52□□□□□ -0.08
HHLA3-203ENST00000370940 URB2Q14146 1524 aaKnown RBP14.51□□□□□ -0.09
HHLA3-203ENST00000370940 RSF1Q96T23 1441 aaPredicted RBP14.47□□□□□ -0.09
HHLA3-203ENST00000370940 TOP2AP11388 1531 aaKnown RBP14.43□□□□□ -0.1
HHLA3-203ENST00000370940 HOXD11P31277 338 aaPredicted RBP14.39□□□□□ -0.11
HHLA3-203ENST00000370940 ZNF608Q9ULD9 1512 aaPredicted RBP14.39□□□□□ -0.11
HHLA3-203ENST00000370940 RIMBP3CA6NJZ7 1639 aa14.37□□□□□ -0.11
HHLA3-203ENST00000370940 RIMBP3BA6NNM3 1639 aa14.37□□□□□ -0.11
HHLA3-203ENST00000370940 RIMBP3Q9UFD9 1639 aa14.37□□□□□ -0.11
HHLA3-203ENST00000370940 SLC4A2P04920 1241 aa14.34□□□□□ -0.11
HHLA3-203ENST00000370940 DMRT2Q9Y5R5 561 aa14.34□□□□□ -0.11
HHLA3-203ENST00000370940 CCDC88BA6NC98 1476 aa14.31□□□□□ -0.12
HHLA3-203ENST00000370940 IFT140Q96RY7 1462 aa14.31□□□□□ -0.12
HHLA3-203ENST00000370940 ARHGEF11O15085 1522 aa14.31□□□□□ -0.12
HHLA3-203ENST00000370940 TOPBP1Q92547 1522 aa14.28□□□□□ -0.12
HHLA3-203ENST00000370940 PRDM2Q13029 1718 aa14.27□□□□□ -0.12
HHLA3-203ENST00000370940 CYB5RLQ6IPT4 315 aa14.26□□□□□ -0.13
HHLA3-203ENST00000370940 EIF4G3O43432 1585 aaKnown RBP14.24□□□□□ -0.13
HHLA3-203ENST00000370940 RTN4Q9NQC3 1192 aaKnown RBP14.23□□□□□ -0.13
HHLA3-203ENST00000370940 AQRO60306 1485 aaKnown RBP eCLIP14.22□□□□□ -0.13
HHLA3-203ENST00000370940 DNMBPQ6XZF7 1577 aa14.18□□□□□ -0.14
HHLA3-203ENST00000370940 FBLN2P98095 1184 aa14.18□□□□□ -0.14
HHLA3-203ENST00000370940 TARBP1Q13395 1621 aaKnown RBP14.17□□□□□ -0.14
HHLA3-203ENST00000370940 ATXN8OSP0DMR3 200 aa14.17□□□□□ -0.14
HHLA3-203ENST00000370940 TRHP20396 242 aaPredicted RBP14.17□□□□□ -0.14
HHLA3-203ENST00000370940 AMER1Q5JTC6 1135 aaPredicted RBP14.17□□□□□ -0.14
HHLA3-203ENST00000370940 ARAP1Q96P48 1450 aa14.17□□□□□ -0.14
HHLA3-203ENST00000370940 ABCC8Q09428 1581 aa14.17□□□□□ -0.14
HHLA3-203ENST00000370940 CHD1O14646 1710 aa14.16□□□□□ -0.14
HHLA3-203ENST00000370940 POLA1P09884 1462 aaPredicted RBP14.13□□□□□ -0.15
HHLA3-203ENST00000370940 SLC24A1O60721 1099 aa14.12□□□□□ -0.15
HHLA3-203ENST00000370940 MYCNP04198 464 aaPredicted RBP14.12□□□□□ -0.15
HHLA3-203ENST00000370940 RAD54L2Q9Y4B4 1467 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms